RNA–Protein interactions for RNA: ENST00000576409.5

ATPAF1-214, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATPAF1, Length 4,158 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-214ENST00000576409 GAGE12GP0CL81 117 aa13.64□□□□□ -0.23
ATPAF1-214ENST00000576409 GAGE12IP0CL82 117 aa13.64□□□□□ -0.23
ATPAF1-214ENST00000576409 RNF185Q96GF1 192 aa13.64□□□□□ -0.23
ATPAF1-214ENST00000576409 ZNF48Q96MX3 618 aaPredicted RBP13.64□□□□□ -0.23
ATPAF1-214ENST00000576409 C11orf21Q9P2W6 132 aa13.64□□□□□ -0.23
ATPAF1-214ENST00000576409 EXPH5Q8NEV8 1989 aa13.64□□□□□ -0.23
ATPAF1-214ENST00000576409 INSL3P51460 131 aa13.64□□□□□ -0.23
ATPAF1-214ENST00000576409 C9orf47Q6ZRZ4 202 aa13.64□□□□□ -0.23
ATPAF1-214ENST00000576409 C5orf56Q8N8D9 126 aa13.64□□□□□ -0.23
ATPAF1-214ENST00000576409 LENEPQ9Y5L5 61 aa13.64□□□□□ -0.23
ATPAF1-214ENST00000576409 HOXD3P31249 432 aaPredicted RBP13.64□□□□□ -0.23
ATPAF1-214ENST00000576409 DEFB112Q30KQ8 113 aa13.64□□□□□ -0.23
ATPAF1-214ENST00000576409 MRPL53Q96EL3 112 aaKnown RBP13.63□□□□□ -0.23
ATPAF1-214ENST00000576409 Q9H8V8 135 aa13.63□□□□□ -0.23
ATPAF1-214ENST00000576409 TRBV6-1A0A0K0K1D8 114 aa13.63□□□□□ -0.23
ATPAF1-214ENST00000576409 PRSS47A8MTI9 375 aa13.63□□□□□ -0.23
ATPAF1-214ENST00000576409 IFITM1P13164 125 aa13.63□□□□□ -0.23
ATPAF1-214ENST00000576409 ADORA2A-AS1P86434 159 aa13.63□□□□□ -0.23
ATPAF1-214ENST00000576409 GAGE6Q13070 117 aa13.63□□□□□ -0.23
ATPAF1-214ENST00000576409 A0A096LPF7 62 aa13.63□□□□□ -0.23
ATPAF1-214ENST00000576409 TOMM6Q96B49 74 aa13.63□□□□□ -0.23
ATPAF1-214ENST00000576409 TMEM86BQ8N661 226 aa13.62□□□□□ -0.23
ATPAF1-214ENST00000576409 P0DMU3 169 aa13.62□□□□□ -0.23
ATPAF1-214ENST00000576409 FAM231AP0DMU4 169 aa13.62□□□□□ -0.23
ATPAF1-214ENST00000576409 FAM231CP0DMU5 169 aa13.62□□□□□ -0.23
ATPAF1-214ENST00000576409 ZNF462Q96JM2 2506 aa13.62□□□□□ -0.23
ATPAF1-214ENST00000576409 MT-ATP8P03928 68 aa13.61□□□□□ -0.23
ATPAF1-214ENST00000576409 CLPSL2Q6UWE3 100 aa13.61□□□□□ -0.23
ATPAF1-214ENST00000576409 TNRC6BQ9UPQ9 1833 aaKnown RBP13.61□□□□□ -0.23
ATPAF1-214ENST00000576409 IGHV4-30-2A0A087WSY4 118 aa13.6□□□□□ -0.23
ATPAF1-214ENST00000576409 TCL1BO95988 128 aa13.6□□□□□ -0.23
ATPAF1-214ENST00000576409 C9orf153Q5TBE3 101 aa13.6□□□□□ -0.23
ATPAF1-214ENST00000576409 PTPRBP23467 1997 aa13.6□□□□□ -0.23
ATPAF1-214ENST00000576409 DSPP15924 2871 aaKnown RBP13.6□□□□□ -0.23
ATPAF1-214ENST00000576409 S100A7L2Q5SY68 101 aa13.6□□□□□ -0.23
ATPAF1-214ENST00000576409 CLEC2BQ92478 149 aa13.6□□□□□ -0.23
ATPAF1-214ENST00000576409 TINCRA0A1B0GVN0 87 aa13.6□□□□□ -0.23
ATPAF1-214ENST00000576409 SPANXB1Q9NS25 103 aaPredicted RBP13.6□□□□□ -0.23
ATPAF1-214ENST00000576409 SLURP1P55000 103 aa13.59□□□□□ -0.23
ATPAF1-214ENST00000576409 LINC01620Q4KN68 170 aa13.59□□□□□ -0.23
ATPAF1-214ENST00000576409 C20orf173Q96LM9 149 aa13.59□□□□□ -0.23
ATPAF1-214ENST00000576409 U3KQE9 123 aa13.59□□□□□ -0.23
ATPAF1-214ENST00000576409 TRAV12-1A0A0B4J245 112 aa13.58□□□□□ -0.23
ATPAF1-214ENST00000576409 CRYBA4P53673 196 aa13.58□□□□□ -0.24
ATPAF1-214ENST00000576409 NDUFA11Q86Y39 141 aa13.58□□□□□ -0.24
ATPAF1-214ENST00000576409 TM2D2Q9BX73 214 aa13.58□□□□□ -0.24
ATPAF1-214ENST00000576409 RHODO00212 210 aa13.57□□□□□ -0.24
ATPAF1-214ENST00000576409 SMIM20Q8N5G0 67 aa13.57□□□□□ -0.24
ATPAF1-214ENST00000576409 LAMTOR3Q9UHA4 124 aa13.57□□□□□ -0.24
ATPAF1-214ENST00000576409 LINC01356Q8N9X3 169 aa13.56□□□□□ -0.24
ATPAF1-214ENST00000576409 SIRPDQ9H106 197 aa13.56□□□□□ -0.24
ATPAF1-214ENST00000576409 HIST2H2BDQ6DRA6 164 aa13.56□□□□□ -0.24
ATPAF1-214ENST00000576409 FASNP49327 2511 aaKnown RBP13.56□□□□□ -0.24
ATPAF1-214ENST00000576409 PRR9Q5T870 116 aa13.55□□□□□ -0.24
ATPAF1-214ENST00000576409 C5orf38Q86SI9 138 aa13.55□□□□□ -0.24
ATPAF1-214ENST00000576409 RHOHQ15669 191 aa13.54□□□□□ -0.24
ATPAF1-214ENST00000576409 A0A096LNJ9 63 aa13.54□□□□□ -0.24
ATPAF1-214ENST00000576409 LY6LH3BQJ8 138 aa13.54□□□□□ -0.24
ATPAF1-214ENST00000576409 ZFAND3Q9H8U3 227 aa13.54□□□□□ -0.24
ATPAF1-214ENST00000576409 RNF183Q96D59 192 aa13.53□□□□□ -0.24
ATPAF1-214ENST00000576409 NOP10Q9NPE3 64 aaKnown RBP13.53□□□□□ -0.24
ATPAF1-214ENST00000576409 PRM2P04554 102 aa13.53□□□□□ -0.24
ATPAF1-214ENST00000576409 NEXN-AS1Q8NBZ9 246 aa13.53□□□□□ -0.24
ATPAF1-214ENST00000576409 IGHV3-30-3P0DP02 117 aa13.52□□□□□ -0.24
ATPAF1-214ENST00000576409 U3KQK5 164 aa13.52□□□□□ -0.24
ATPAF1-214ENST00000576409 ODF3BA8MYP8 253 aa13.52□□□□□ -0.25
ATPAF1-214ENST00000576409 ZFAND2AQ8N6M9 145 aa13.52□□□□□ -0.25
ATPAF1-214ENST00000576409 HHLA3Q9XRX5 114 aa13.52□□□□□ -0.25
ATPAF1-214ENST00000576409 EPG5Q9HCE0 2579 aa13.52□□□□□ -0.25
ATPAF1-214ENST00000576409 LINC01619G3V211 115 aa13.52□□□□□ -0.25
ATPAF1-214ENST00000576409 BAALC-AS2P0C853 105 aa13.52□□□□□ -0.25
ATPAF1-214ENST00000576409 C10orf99Q6UWK7 81 aa13.52□□□□□ -0.25
ATPAF1-214ENST00000576409 A8MZ25 164 aa13.51□□□□□ -0.25
ATPAF1-214ENST00000576409 FRYLO94915 3013 aa13.51□□□□□ -0.25
ATPAF1-214ENST00000576409 TEX49A0A1B0GTD5 131 aa13.51□□□□□ -0.25
ATPAF1-214ENST00000576409 TMEM243Q9BU79 118 aa13.51□□□□□ -0.25
ATPAF1-214ENST00000576409 ICOSQ9Y6W8 199 aa13.51□□□□□ -0.25
ATPAF1-214ENST00000576409 IGHV4OR15-8A0A075B7B6 117 aa13.51□□□□□ -0.25
ATPAF1-214ENST00000576409 A0A087WW49 117 aa13.51□□□□□ -0.25
ATPAF1-214ENST00000576409 LMO4P61968 165 aa13.51□□□□□ -0.25
ATPAF1-214ENST00000576409 Q6ZUT4 128 aa13.51□□□□□ -0.25
ATPAF1-214ENST00000576409 C20orf203Q8NBC4 194 aa13.51□□□□□ -0.25
ATPAF1-214ENST00000576409 CDSNQ15517 529 aa13.5□□□□□ -0.25
ATPAF1-214ENST00000576409 NRACQ8N912 160 aa13.5□□□□□ -0.25
ATPAF1-214ENST00000576409 A0A0J9YY99 117 aa13.5□□□□□ -0.25
ATPAF1-214ENST00000576409 FSTL3O95633 263 aa13.5□□□□□ -0.25
ATPAF1-214ENST00000576409 TIMM17AQ99595 171 aa13.5□□□□□ -0.25
ATPAF1-214ENST00000576409 CLUHP3Q96NS8 147 aa13.5□□□□□ -0.25
ATPAF1-214ENST00000576409 PROK1P58294 105 aa13.49□□□□□ -0.25
ATPAF1-214ENST00000576409 Q6ZS46 218 aa13.49□□□□□ -0.25
ATPAF1-214ENST00000576409 FRYQ5TBA9 3013 aa13.49□□□□□ -0.25
ATPAF1-214ENST00000576409 XCL1P47992 114 aa13.48□□□□□ -0.25
ATPAF1-214ENST00000576409 CITED1Q99966 193 aa13.48□□□□□ -0.25
ATPAF1-214ENST00000576409 ADAMTS20P59510 1910 aa13.47□□□□□ -0.25
ATPAF1-214ENST00000576409 HERVK_113P63121 156 aa13.47□□□□□ -0.25
ATPAF1-214ENST00000576409 ESM1Q9NQ30 184 aa13.46□□□□□ -0.25
ATPAF1-214ENST00000576409 DSCR9P59020 149 aa13.46□□□□□ -0.25
ATPAF1-214ENST00000576409 IGHG2P01859 326 aa13.46□□□□□ -0.25
ATPAF1-214ENST00000576409 PRB1P04280 392 aa13.46□□□□□ -0.26
ATPAF1-214ENST00000576409 INAFM2P0DMQ5 153 aa13.46□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 92.8 ms