RNA–Protein interactions for RNA: ENST00000571272.5

SCARF1-205, Transcript of scavenger receptor class F member 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCARF1, Length 2,871 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-205ENST00000571272 PPDPFLQ8WWR9 84 aa12.94□□□□□ -0.34
SCARF1-205ENST00000571272 A8MWV9 139 aa12.93□□□□□ -0.34
SCARF1-205ENST00000571272 TRBV20-1A0A075B6N2 111 aa12.93□□□□□ -0.34
SCARF1-205ENST00000571272 A0A0J9YXV3 536 aa12.93□□□□□ -0.34
SCARF1-205ENST00000571272 K7EMT4 169 aa12.93□□□□□ -0.34
SCARF1-205ENST00000571272 EIF4EBP3O60516 100 aaPredicted RBP12.93□□□□□ -0.34
SCARF1-205ENST00000571272 TMEM223A0PJW6 202 aa12.92□□□□□ -0.34
SCARF1-205ENST00000571272 XGP55808 180 aa12.92□□□□□ -0.34
SCARF1-205ENST00000571272 A0A0J9YX75 114 aa12.92□□□□□ -0.34
SCARF1-205ENST00000571272 AVPP01185 164 aa12.92□□□□□ -0.34
SCARF1-205ENST00000571272 IGHV4-30-2A0A087WSY4 118 aa12.91□□□□□ -0.34
SCARF1-205ENST00000571272 HTN1P15515 57 aa12.91□□□□□ -0.34
SCARF1-205ENST00000571272 GNLYP22749 145 aa12.91□□□□□ -0.34
SCARF1-205ENST00000571272 CFHR3Q02985 330 aa12.91□□□□□ -0.34
SCARF1-205ENST00000571272 TRPT1Q86TN4 253 aaKnown RBP12.91□□□□□ -0.34
SCARF1-205ENST00000571272 ANKRD29Q8N6D5 301 aa12.91□□□□□ -0.34
SCARF1-205ENST00000571272 ITPR1Q14643 2758 aa12.91□□□□□ -0.34
SCARF1-205ENST00000571272 IGHV1OR15-1A0A075B7D0 117 aa12.91□□□□□ -0.34
SCARF1-205ENST00000571272 ZNF22P17026 224 aaPredicted RBP12.91□□□□□ -0.34
SCARF1-205ENST00000571272 NSUN5P1Q3KNT7 163 aa12.91□□□□□ -0.34
SCARF1-205ENST00000571272 MUSTN1Q8IVN3 82 aa12.91□□□□□ -0.34
SCARF1-205ENST00000571272 C20orf203Q8NBC4 194 aa12.91□□□□□ -0.34
SCARF1-205ENST00000571272 C10orf105Q8TEF2 133 aa12.91□□□□□ -0.34
SCARF1-205ENST00000571272 IGHV3-73A0A0B4J1V6 119 aa12.91□□□□□ -0.34
SCARF1-205ENST00000571272 ADARB2-AS1A8MUL3 147 aa12.91□□□□□ -0.34
SCARF1-205ENST00000571272 LEPROTO15243 131 aa12.91□□□□□ -0.34
SCARF1-205ENST00000571272 Q6ZUT4 128 aa12.91□□□□□ -0.34
SCARF1-205ENST00000571272 DUX5Q96PT3 197 aa12.91□□□□□ -0.34
SCARF1-205ENST00000571272 CRYBA4P53673 196 aa12.9□□□□□ -0.34
SCARF1-205ENST00000571272 SNRPD3P62318 126 aaKnown RBP12.9□□□□□ -0.34
SCARF1-205ENST00000571272 RHODO00212 210 aa12.9□□□□□ -0.34
SCARF1-205ENST00000571272 RHOHQ15669 191 aa12.9□□□□□ -0.34
SCARF1-205ENST00000571272 CCL19Q99731 98 aa12.9□□□□□ -0.34
SCARF1-205ENST00000571272 VCX2Q9H322 139 aa12.9□□□□□ -0.34
SCARF1-205ENST00000571272 USP9YO00507 2555 aaPredicted RBP12.89□□□□□ -0.35
SCARF1-205ENST00000571272 TCTEX1D4Q5JR98 221 aa12.89□□□□□ -0.35
SCARF1-205ENST00000571272 C9JAW5 83 aa12.89□□□□□ -0.35
SCARF1-205ENST00000571272 I3L3M4 83 aa12.89□□□□□ -0.35
SCARF1-205ENST00000571272 IGHV3-33P01772 117 aa12.89□□□□□ -0.35
SCARF1-205ENST00000571272 SPXQ9BT56 116 aa12.89□□□□□ -0.35
SCARF1-205ENST00000571272 IGLV4-3A0A075B6K6 122 aa12.88□□□□□ -0.35
SCARF1-205ENST00000571272 PSMB8P28062 276 aa12.88□□□□□ -0.35
SCARF1-205ENST00000571272 ATP5J2P56134 94 aa12.88□□□□□ -0.35
SCARF1-205ENST00000571272 MSMBP08118 114 aa12.88□□□□□ -0.35
SCARF1-205ENST00000571272 SBSPONQ8IVN8 264 aa12.88□□□□□ -0.35
SCARF1-205ENST00000571272 ERG28Q9UKR5 140 aa12.88□□□□□ -0.35
SCARF1-205ENST00000571272 SLC25A20O43772 301 aa12.87□□□□□ -0.35
SCARF1-205ENST00000571272 SYNJ2BPP57105 145 aa12.87□□□□□ -0.35
SCARF1-205ENST00000571272 Q1RN00 199 aa12.87□□□□□ -0.35
SCARF1-205ENST00000571272 RNASE13Q5GAN3 156 aaKnown RBP12.87□□□□□ -0.35
SCARF1-205ENST00000571272 CEMP1Q6PRD7 247 aaPredicted RBP12.87□□□□□ -0.35
SCARF1-205ENST00000571272 TMEM263Q8WUH6 116 aaKnown RBP12.87□□□□□ -0.35
SCARF1-205ENST00000571272 CSMD2Q7Z408 3487 aa12.87□□□□□ -0.35
SCARF1-205ENST00000571272 PROK1P58294 105 aa12.87□□□□□ -0.35
SCARF1-205ENST00000571272 GEMIN7Q9H840 131 aaKnown RBP12.87□□□□□ -0.35
SCARF1-205ENST00000571272 PRRC2AP48634 2157 aaKnown RBP12.87□□□□□ -0.35
SCARF1-205ENST00000571272 K7EQG2 157 aa12.87□□□□□ -0.35
SCARF1-205ENST00000571272 IGHV4-59P01825 116 aa12.87□□□□□ -0.35
SCARF1-205ENST00000571272 BEX4Q9NWD9 120 aaPredicted RBP12.87□□□□□ -0.35
SCARF1-205ENST00000571272 ELANEP08246 267 aa12.86□□□□□ -0.35
SCARF1-205ENST00000571272 PRM2P04554 102 aa12.86□□□□□ -0.35
SCARF1-205ENST00000571272 ODF3Q96PU9 254 aa12.85□□□□□ -0.35
SCARF1-205ENST00000571272 TRAV8-3A0A0A6YYJ7 113 aa12.85□□□□□ -0.35
SCARF1-205ENST00000571272 A0A0J9YXY3 114 aa12.84□□□□□ -0.35
SCARF1-205ENST00000571272 PRSS2P07478 247 aa12.84□□□□□ -0.35
SCARF1-205ENST00000571272 IGHV3-30-3P0DP02 117 aa12.84□□□□□ -0.35
SCARF1-205ENST00000571272 CD28P10747 220 aa12.84□□□□□ -0.35
SCARF1-205ENST00000571272 TRAV26-1A0A087WT03 109 aa12.83□□□□□ -0.35
SCARF1-205ENST00000571272 KNCNA6PVL3 124 aa12.83□□□□□ -0.35
SCARF1-205ENST00000571272 Q5PR19 223 aa12.83□□□□□ -0.35
SCARF1-205ENST00000571272 Q9UF83 564 aa12.83□□□□□ -0.35
SCARF1-205ENST00000571272 ZANQ9Y493 2812 aa12.83□□□□□ -0.35
SCARF1-205ENST00000571272 RBMY1A1P0DJD3 496 aaKnown RBP12.83□□□□□ -0.36
SCARF1-205ENST00000571272 RBMY1CP0DJD4 496 aa12.83□□□□□ -0.36
SCARF1-205ENST00000571272 RBMY1FQ15415 496 aaKnown RBP12.83□□□□□ -0.36
SCARF1-205ENST00000571272 FLNCQ14315 2725 aa12.83□□□□□ -0.36
SCARF1-205ENST00000571272 A0A0B4J2C4 111 aa12.82□□□□□ -0.36
SCARF1-205ENST00000571272 M0R2P5 195 aa12.82□□□□□ -0.36
SCARF1-205ENST00000571272 DEFB112Q30KQ8 113 aa12.82□□□□□ -0.36
SCARF1-205ENST00000571272 CLUHP3Q96NS8 147 aa12.82□□□□□ -0.36
SCARF1-205ENST00000571272 TIMM21Q9BVV7 248 aa12.82□□□□□ -0.36
SCARF1-205ENST00000571272 A8MZ25 164 aa12.81□□□□□ -0.36
SCARF1-205ENST00000571272 FAM104AQ969W3 186 aa12.81□□□□□ -0.36
SCARF1-205ENST00000571272 NPC2P61916 151 aa12.81□□□□□ -0.36
SCARF1-205ENST00000571272 POLQO75417 2590 aa12.8□□□□□ -0.36
SCARF1-205ENST00000571272 TRGV11A0A075B6L2 103 aa12.8□□□□□ -0.36
SCARF1-205ENST00000571272 TRAV16A0A0A6YYK6 109 aaPredicted RBP12.8□□□□□ -0.36
SCARF1-205ENST00000571272 NTN5Q8WTR8 489 aaPredicted RBP12.8□□□□□ -0.36
SCARF1-205ENST00000571272 UTP20O75691 2785 aaKnown RBP12.79□□□□□ -0.36
SCARF1-205ENST00000571272 ADAMTSL4-AS1Q5T5F5 129 aa12.79□□□□□ -0.36
SCARF1-205ENST00000571272 NRGNQ92686 78 aa12.79□□□□□ -0.36
SCARF1-205ENST00000571272 USP9XQ93008 2570 aaPredicted RBP12.79□□□□□ -0.36
SCARF1-205ENST00000571272 NACAE9PAV3 2078 aa12.79□□□□□ -0.36
SCARF1-205ENST00000571272 CFAP46Q8IYW2 2715 aa12.78□□□□□ -0.36
SCARF1-205ENST00000571272 B4DSR2 109 aa12.78□□□□□ -0.36
SCARF1-205ENST00000571272 LITAFQ99732 161 aa12.78□□□□□ -0.36
SCARF1-205ENST00000571272 TNFRSF18Q9Y5U5 241 aa12.78□□□□□ -0.36
SCARF1-205ENST00000571272 TRIAP1O43715 76 aa12.78□□□□□ -0.36
SCARF1-205ENST00000571272 HOXD3P31249 432 aaPredicted RBP12.78□□□□□ -0.36
SCARF1-205ENST00000571272 LINC01620Q4KN68 170 aa12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 63.1 ms