RNA–Protein interactions for RNA: ENST00000566889.5

FANCA-221, Transcript of FA complementation group A, humanhuman

TSL 1 (best)

Gene FANCA, Length 2,201 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FANCA-221ENST00000566889 TMEM61Q8N0U2 210 aa18.56■□□□□ 0.56
FANCA-221ENST00000566889 C9orf85Q96MD7 179 aa18.56■□□□□ 0.56
FANCA-221ENST00000566889 PYGO1Q9Y3Y4 419 aa18.56■□□□□ 0.56
FANCA-221ENST00000566889 ADAMTSL4-AS1Q5T5F5 129 aa18.55■□□□□ 0.56
FANCA-221ENST00000566889 NDUFA12Q9UI09 145 aa18.55■□□□□ 0.56
FANCA-221ENST00000566889 TRAV41A0A0B4J266 112 aa18.55■□□□□ 0.56
FANCA-221ENST00000566889 C5orf56Q8N8D9 126 aa18.55■□□□□ 0.56
FANCA-221ENST00000566889 FAM236AA0A1B0GUQ0 79 aa18.54■□□□□ 0.56
FANCA-221ENST00000566889 FAM236BA0A1B0GV22 79 aa18.54■□□□□ 0.56
FANCA-221ENST00000566889 BOD1L1Q8NFC6 3051 aa18.54■□□□□ 0.56
FANCA-221ENST00000566889 TACC2O95359 2948 aa18.54■□□□□ 0.56
FANCA-221ENST00000566889 ADARB2-AS1A8MUL3 147 aa18.54■□□□□ 0.56
FANCA-221ENST00000566889 C19orf54Q5BKX5 351 aa18.54■□□□□ 0.56
FANCA-221ENST00000566889 ATP5G1P05496 136 aa18.53■□□□□ 0.56
FANCA-221ENST00000566889 ZFP36P26651 326 aaKnown RBP18.53■□□□□ 0.56
FANCA-221ENST00000566889 TIMM17BO60830 172 aa18.52■□□□□ 0.56
FANCA-221ENST00000566889 C3orf22Q8N5N4 141 aa18.52■□□□□ 0.56
FANCA-221ENST00000566889 DNAJC30Q96LL9 226 aa18.52■□□□□ 0.56
FANCA-221ENST00000566889 IGHV3-16A0A0C4DH30 117 aa18.51■□□□□ 0.55
FANCA-221ENST00000566889 PPDPFQ9H3Y8 114 aa18.51■□□□□ 0.55
FANCA-221ENST00000566889 ABCA4P78363 2273 aa18.5■□□□□ 0.55
FANCA-221ENST00000566889 SAA4P35542 130 aa18.5■□□□□ 0.55
FANCA-221ENST00000566889 LINC00643Q86TS7 51 aa18.5■□□□□ 0.55
FANCA-221ENST00000566889 TRAV8-3A0A0A6YYJ7 113 aa18.5■□□□□ 0.55
FANCA-221ENST00000566889 NRGNQ92686 78 aa18.5■□□□□ 0.55
FANCA-221ENST00000566889 PCNX1Q96RV3 2341 aa18.49■□□□□ 0.55
FANCA-221ENST00000566889 UQCRQO14949 82 aa18.49■□□□□ 0.55
FANCA-221ENST00000566889 CD28P10747 220 aa18.49■□□□□ 0.55
FANCA-221ENST00000566889 C9orf153Q5TBE3 101 aa18.49■□□□□ 0.55
FANCA-221ENST00000566889 Q8NA96 180 aa18.49■□□□□ 0.55
FANCA-221ENST00000566889 VSIG2Q96IQ7 327 aa18.49■□□□□ 0.55
FANCA-221ENST00000566889 TRAV12-3A0A0B4J271 114 aa18.49■□□□□ 0.55
FANCA-221ENST00000566889 CEP250Q9BV73 2442 aa18.48■□□□□ 0.55
FANCA-221ENST00000566889 NDUFA7O95182 113 aa18.48■□□□□ 0.55
FANCA-221ENST00000566889 TRBV12-3P01733 135 aa18.48■□□□□ 0.55
FANCA-221ENST00000566889 ID1P41134 155 aa18.48■□□□□ 0.55
FANCA-221ENST00000566889 CNOT1A5YKK6 2376 aaKnown RBP18.48■□□□□ 0.55
FANCA-221ENST00000566889 DCANP1Q8TF63 244 aa18.47■□□□□ 0.55
FANCA-221ENST00000566889 Q6ZSV7 163 aa18.47■□□□□ 0.55
FANCA-221ENST00000566889 C3orf56Q8N813 242 aa18.47■□□□□ 0.55
FANCA-221ENST00000566889 RHPN1-AS1Q9BWJ2 59 aa18.47■□□□□ 0.55
FANCA-221ENST00000566889 TINCRA0A1B0GVN0 87 aa18.46■□□□□ 0.55
FANCA-221ENST00000566889 ADGRG4Q8IZF6 3080 aa18.45■□□□□ 0.54
FANCA-221ENST00000566889 IGKV3-7A0A075B6H7 116 aa18.45■□□□□ 0.54
FANCA-221ENST00000566889 LINC00526Q96FQ7 95 aa18.45■□□□□ 0.54
FANCA-221ENST00000566889 MOB4Q9Y3A3 225 aa18.45■□□□□ 0.54
FANCA-221ENST00000566889 MUC3AQ02505 3323 aa18.45■□□□□ 0.54
FANCA-221ENST00000566889 C11orf71Q6IPW1 123 aa18.45■□□□□ 0.54
FANCA-221ENST00000566889 USMG5Q96IX5 58 aa18.45■□□□□ 0.54
FANCA-221ENST00000566889 LINC00694P0DN24 101 aa18.43■□□□□ 0.54
FANCA-221ENST00000566889 CXCL5P42830 114 aa18.43■□□□□ 0.54
FANCA-221ENST00000566889 FBXL19-AS1Q494R0 122 aa18.43■□□□□ 0.54
FANCA-221ENST00000566889 SDIM1Q6ZPB5 146 aa18.43■□□□□ 0.54
FANCA-221ENST00000566889 FAM104AQ969W3 186 aa18.43■□□□□ 0.54
FANCA-221ENST00000566889 EDA2RQ9HAV5 297 aa18.43■□□□□ 0.54
FANCA-221ENST00000566889 NPC2P61916 151 aa18.42■□□□□ 0.54
FANCA-221ENST00000566889 APC2O95996 2303 aa18.41■□□□□ 0.54
FANCA-221ENST00000566889 H3BUA1 57 aa18.41■□□□□ 0.54
FANCA-221ENST00000566889 CEMP1Q6PRD7 247 aaPredicted RBP18.41■□□□□ 0.54
FANCA-221ENST00000566889 LINC00527Q9UJ94 153 aa18.41■□□□□ 0.54
FANCA-221ENST00000566889 PRRC2AP48634 2157 aaKnown RBP18.41■□□□□ 0.54
FANCA-221ENST00000566889 CSMD1Q96PZ7 3565 aa18.41■□□□□ 0.54
FANCA-221ENST00000566889 NPFFO15130 113 aa18.41■□□□□ 0.54
FANCA-221ENST00000566889 PIEZO2Q9H5I5 2752 aa18.4■□□□□ 0.54
FANCA-221ENST00000566889 COX7A2LO14548 114 aa18.4■□□□□ 0.54
FANCA-221ENST00000566889 LRRC75A-AS1Q8N1F1 130 aa18.39■□□□□ 0.54
FANCA-221ENST00000566889 SMCR5Q8TEV8 140 aa18.39■□□□□ 0.54
FANCA-221ENST00000566889 DAZ1Q9NQZ3 744 aaKnown RBP18.39■□□□□ 0.54
FANCA-221ENST00000566889 A0A1B0GX51 115 aa18.38■□□□□ 0.53
FANCA-221ENST00000566889 CITED2Q99967 270 aaPredicted RBP18.38■□□□□ 0.53
FANCA-221ENST00000566889 PEMTQ9UBM1 199 aa18.38■□□□□ 0.53
FANCA-221ENST00000566889 IGHV1OR15-1A0A075B7D0 117 aa18.38■□□□□ 0.53
FANCA-221ENST00000566889 CIRBPQ14011 172 aaKnown RBP18.38■□□□□ 0.53
FANCA-221ENST00000566889 CSDC2Q9Y534 153 aaKnown RBP18.38■□□□□ 0.53
FANCA-221ENST00000566889 GRNP28799 593 aaKnown RBP18.37■□□□□ 0.53
FANCA-221ENST00000566889 HERVK_113P63121 156 aa18.37■□□□□ 0.53
FANCA-221ENST00000566889 TMEM219Q86XT9 240 aa18.37■□□□□ 0.53
FANCA-221ENST00000566889 C5orf38Q86SI9 138 aa18.37■□□□□ 0.53
FANCA-221ENST00000566889 DUX5Q96PT3 197 aa18.37■□□□□ 0.53
FANCA-221ENST00000566889 NDUFA1O15239 70 aa18.36■□□□□ 0.53
FANCA-221ENST00000566889 J3KT08 172 aa18.35■□□□□ 0.53
FANCA-221ENST00000566889 COPS9Q8WXC6 57 aa18.35■□□□□ 0.53
FANCA-221ENST00000566889 TRACP01848 142 aa18.34■□□□□ 0.53
FANCA-221ENST00000566889 COX7CP15954 63 aa18.34■□□□□ 0.53
FANCA-221ENST00000566889 K7EMT4 169 aa18.34■□□□□ 0.53
FANCA-221ENST00000566889 DAND5Q8N907 189 aa18.34■□□□□ 0.53
FANCA-221ENST00000566889 MAP1BP46821 2468 aaKnown RBP18.33■□□□□ 0.53
FANCA-221ENST00000566889 A8MZ25 164 aa18.33■□□□□ 0.53
FANCA-221ENST00000566889 IGHV3-11P01762 117 aa18.33■□□□□ 0.53
FANCA-221ENST00000566889 C5orf47Q569G3 176 aa18.33■□□□□ 0.52
FANCA-221ENST00000566889 DAZ2Q13117 558 aaKnown RBP18.32■□□□□ 0.52
FANCA-221ENST00000566889 DAZ4Q86SG3 579 aaKnown RBP18.32■□□□□ 0.52
FANCA-221ENST00000566889 DAZ3Q9NR90 486 aaKnown RBP18.32■□□□□ 0.52
FANCA-221ENST00000566889 FAM222AQ5U5X8 452 aa18.31■□□□□ 0.52
FANCA-221ENST00000566889 LINC00308Q8TCZ7 52 aa18.31■□□□□ 0.52
FANCA-221ENST00000566889 TRAV12-2A0A075B6T6 113 aa18.3■□□□□ 0.52
FANCA-221ENST00000566889 UBE2D4Q9Y2X8 147 aa18.3■□□□□ 0.52
FANCA-221ENST00000566889 INAFM2P0DMQ5 153 aa18.3■□□□□ 0.52
FANCA-221ENST00000566889 CRYGAP11844 174 aa18.3■□□□□ 0.52
FANCA-221ENST00000566889 RPS28P62857 69 aaKnown RBP18.29■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 81.5 ms