RNA–Protein interactions for RNA: ENST00000566339.5

SPSB3-208, Transcript of splA/ryanodine receptor domain and SOCS box containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPSB3, Length 1,784 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPSB3-208ENST00000566339 FAM231CP0DMU5 169 aa16.09■□□□□ 0.17
SPSB3-208ENST00000566339 CFHR3Q02985 330 aa16.09■□□□□ 0.17
SPSB3-208ENST00000566339 ZNRF2Q8NHG8 242 aa16.09■□□□□ 0.17
SPSB3-208ENST00000566339 TRAV16A0A0A6YYK6 109 aaPredicted RBP16.08■□□□□ 0.17
SPSB3-208ENST00000566339 TMEM89A2RUT3 159 aa16.08■□□□□ 0.17
SPSB3-208ENST00000566339 F5H697 171 aa16.08■□□□□ 0.17
SPSB3-208ENST00000566339 TCL1BO95988 128 aa16.08■□□□□ 0.17
SPSB3-208ENST00000566339 CKS1BP61024 79 aa16.08■□□□□ 0.17
SPSB3-208ENST00000566339 ZNF256Q9Y2P7 627 aaPredicted RBP16.08■□□□□ 0.17
SPSB3-208ENST00000566339 M0QY20 66 aa16.08■□□□□ 0.16
SPSB3-208ENST00000566339 CLEC2AQ6UVW9 174 aa16.08■□□□□ 0.16
SPSB3-208ENST00000566339 TSPEAR-AS2P59090 65 aa16.07■□□□□ 0.16
SPSB3-208ENST00000566339 RPL39P62891 51 aaKnown RBP16.07■□□□□ 0.16
SPSB3-208ENST00000566339 PIMREGQ9BSJ6 248 aa16.07■□□□□ 0.16
SPSB3-208ENST00000566339 DEFB1P60022 68 aa16.06■□□□□ 0.16
SPSB3-208ENST00000566339 CSMD2Q7Z408 3487 aa16.06■□□□□ 0.16
SPSB3-208ENST00000566339 IGHV3-11P01762 117 aa16.05■□□□□ 0.16
SPSB3-208ENST00000566339 ZNF688P0C7X2 276 aa16.05■□□□□ 0.16
SPSB3-208ENST00000566339 Q6ZS46 218 aa16.05■□□□□ 0.16
SPSB3-208ENST00000566339 ABCA2Q9BZC7 2435 aa16.05■□□□□ 0.16
SPSB3-208ENST00000566339 C20orf203Q8NBC4 194 aa16.05■□□□□ 0.16
SPSB3-208ENST00000566339 CARD19Q96LW7 228 aa16.05■□□□□ 0.16
SPSB3-208ENST00000566339 Q6ZUT4 128 aa16.04■□□□□ 0.16
SPSB3-208ENST00000566339 PYGO1Q9Y3Y4 419 aa16.04■□□□□ 0.16
SPSB3-208ENST00000566339 A0A087WWL8 130 aa16.03■□□□□ 0.16
SPSB3-208ENST00000566339 I3L3M4 83 aa16.03■□□□□ 0.16
SPSB3-208ENST00000566339 IGHV4-39P01824 125 aa16.03■□□□□ 0.16
SPSB3-208ENST00000566339 SPINK8P0C7L1 97 aa16.03■□□□□ 0.16
SPSB3-208ENST00000566339 ABCA12Q86UK0 2595 aa16.03■□□□□ 0.16
SPSB3-208ENST00000566339 H3BUX3 64 aa16.03■□□□□ 0.16
SPSB3-208ENST00000566339 C19orf84I3L1E1 186 aa16.03■□□□□ 0.16
SPSB3-208ENST00000566339 IGHV3-33P01772 117 aa16.03■□□□□ 0.16
SPSB3-208ENST00000566339 SCGB1C2P0DMR2 95 aa16.03■□□□□ 0.16
SPSB3-208ENST00000566339 SNRPD3P62318 126 aaKnown RBP16.03■□□□□ 0.16
SPSB3-208ENST00000566339 TMEM263Q8WUH6 116 aaKnown RBP16.03■□□□□ 0.16
SPSB3-208ENST00000566339 JPT2Q9H910 190 aa16.03■□□□□ 0.16
SPSB3-208ENST00000566339 TRGV11A0A075B6L2 103 aa16.02■□□□□ 0.15
SPSB3-208ENST00000566339 IGHV1OR15-1A0A075B7D0 117 aa16.02■□□□□ 0.15
SPSB3-208ENST00000566339 TRAV12-3A0A0B4J271 114 aa16.02■□□□□ 0.15
SPSB3-208ENST00000566339 RHODO00212 210 aa16.02■□□□□ 0.15
SPSB3-208ENST00000566339 ERG28Q9UKR5 140 aa16.02■□□□□ 0.15
SPSB3-208ENST00000566339 MED13LQ71F56 2210 aa16.02■□□□□ 0.15
SPSB3-208ENST00000566339 MUC4Q99102 2169 aa16.01■□□□□ 0.15
SPSB3-208ENST00000566339 ZNF22P17026 224 aaPredicted RBP16.01■□□□□ 0.15
SPSB3-208ENST00000566339 ZNF56Q15929 161 aa16.01■□□□□ 0.15
SPSB3-208ENST00000566339 BRD3OSQ6XYD6 125 aa16.01■□□□□ 0.15
SPSB3-208ENST00000566339 APCP25054 2843 aa16.01■□□□□ 0.15
SPSB3-208ENST00000566339 M0R2P5 195 aa16■□□□□ 0.15
SPSB3-208ENST00000566339 EMP1P54849 157 aa16■□□□□ 0.15
SPSB3-208ENST00000566339 A4D1N5 150 aa16■□□□□ 0.15
SPSB3-208ENST00000566339 IGHV3OR16-10A0A075B7F0 116 aa15.99■□□□□ 0.15
SPSB3-208ENST00000566339 K7EQG2 157 aa15.99■□□□□ 0.15
SPSB3-208ENST00000566339 LY6EQ16553 131 aa15.99■□□□□ 0.15
SPSB3-208ENST00000566339 PIK3CD-AS1Q5SR53 167 aa15.99■□□□□ 0.15
SPSB3-208ENST00000566339 C10orf105Q8TEF2 133 aa15.99■□□□□ 0.15
SPSB3-208ENST00000566339 FBN2P35556 2912 aa15.98■□□□□ 0.15
SPSB3-208ENST00000566339 IGKV3-7A0A075B6H7 116 aa15.98■□□□□ 0.15
SPSB3-208ENST00000566339 SLC25A20O43772 301 aa15.98■□□□□ 0.15
SPSB3-208ENST00000566339 ANKRD29Q8N6D5 301 aa15.98■□□□□ 0.15
SPSB3-208ENST00000566339 RNF183Q96D59 192 aa15.98■□□□□ 0.15
SPSB3-208ENST00000566339 ATXN8Q156A1 80 aa15.98■□□□□ 0.15
SPSB3-208ENST00000566339 GEMIN7Q9H840 131 aaKnown RBP15.98■□□□□ 0.15
SPSB3-208ENST00000566339 IGLV4-3A0A075B6K6 122 aa15.97■□□□□ 0.15
SPSB3-208ENST00000566339 IGHV4-38-2P0DP08 117 aa15.97■□□□□ 0.15
SPSB3-208ENST00000566339 PSMB8P28062 276 aa15.97■□□□□ 0.15
SPSB3-208ENST00000566339 IGHV4-61A0A0C4DH41 118 aa15.96■□□□□ 0.15
SPSB3-208ENST00000566339 TRBV30A0A0K0K1B3 111 aa15.96■□□□□ 0.15
SPSB3-208ENST00000566339 BLCAPP62952 87 aa15.96■□□□□ 0.15
SPSB3-208ENST00000566339 FAM74A4Q5TZK3 123 aa15.96■□□□□ 0.15
SPSB3-208ENST00000566339 Q8N1Y9 231 aa15.96■□□□□ 0.15
SPSB3-208ENST00000566339 XGP55808 180 aa15.95■□□□□ 0.14
SPSB3-208ENST00000566339 PTH2Q96A98 100 aa15.95■□□□□ 0.14
SPSB3-208ENST00000566339 MT-ATP8P03928 68 aa15.95■□□□□ 0.14
SPSB3-208ENST00000566339 MRPS36P82909 103 aaKnown RBP15.95■□□□□ 0.14
SPSB3-208ENST00000566339 FHL3Q13643 280 aa15.95■□□□□ 0.14
SPSB3-208ENST00000566339 CREBBPQ92793 2442 aa15.94■□□□□ 0.14
SPSB3-208ENST00000566339 GATA3P23771 443 aa15.94■□□□□ 0.14
SPSB3-208ENST00000566339 MUSTN1Q8IVN3 82 aa15.94■□□□□ 0.14
SPSB3-208ENST00000566339 SPANXDQ9BXN6 97 aa15.94■□□□□ 0.14
SPSB3-208ENST00000566339 SPANXCQ9NY87 97 aa15.94■□□□□ 0.14
SPSB3-208ENST00000566339 SRD5A1P18405 259 aa15.93■□□□□ 0.14
SPSB3-208ENST00000566339 RPL13AP40429 203 aaKnown RBP15.93■□□□□ 0.14
SPSB3-208ENST00000566339 SFTA2Q6UW10 78 aa15.93■□□□□ 0.14
SPSB3-208ENST00000566339 A0A0J9YXY3 114 aa15.92■□□□□ 0.14
SPSB3-208ENST00000566339 TRAV2A0A0B4J234 112 aa15.92■□□□□ 0.14
SPSB3-208ENST00000566339 MSMBP08118 114 aa15.92■□□□□ 0.14
SPSB3-208ENST00000566339 Q5PR19 223 aa15.92■□□□□ 0.14
SPSB3-208ENST00000566339 C9JAW5 83 aa15.91■□□□□ 0.14
SPSB3-208ENST00000566339 A0A0J9YXV3 536 aa15.9■□□□□ 0.14
SPSB3-208ENST00000566339 TRBV10-2A0A0K0K1G8 114 aa15.9■□□□□ 0.14
SPSB3-208ENST00000566339 A8MTW9 85 aa15.9■□□□□ 0.14
SPSB3-208ENST00000566339 EIF4EBP3O60516 100 aaPredicted RBP15.9■□□□□ 0.14
SPSB3-208ENST00000566339 TIMM17BO60830 172 aa15.9■□□□□ 0.14
SPSB3-208ENST00000566339 LINC01620Q4KN68 170 aa15.9■□□□□ 0.14
SPSB3-208ENST00000566339 TIMM21Q9BVV7 248 aa15.9■□□□□ 0.14
SPSB3-208ENST00000566339 SPANXA1Q9NS26 97 aa15.9■□□□□ 0.14
SPSB3-208ENST00000566339 POLQO75417 2590 aa15.89■□□□□ 0.14
SPSB3-208ENST00000566339 IGHV1-58A0A0C4DH39 117 aa15.89■□□□□ 0.13
SPSB3-208ENST00000566339 IGHV3-30-3P0DP02 117 aa15.89■□□□□ 0.13
SPSB3-208ENST00000566339 ZFAND6Q6FIF0 208 aa15.89■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 61.1 ms