RNA–Protein interactions for RNA: ENST00000565662.5

USB1-211, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 4

Gene USB1, Length 719 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-211ENST00000565662 C9orf62Q8N4C0 152 aa11.18□□□□□ -0.62
USB1-211ENST00000565662 FRZBQ92765 325 aa11.18□□□□□ -0.62
USB1-211ENST00000565662 IGLV2-8P01709 118 aa11.17□□□□□ -0.62
USB1-211ENST00000565662 C14orf177Q52M58 125 aa11.17□□□□□ -0.62
USB1-211ENST00000565662 TPPP3Q9BW30 176 aa11.17□□□□□ -0.62
USB1-211ENST00000565662 TRBV25-1A0A075B6N4 114 aa11.16□□□□□ -0.62
USB1-211ENST00000565662 SMIM15Q7Z3B0 74 aa11.16□□□□□ -0.62
USB1-211ENST00000565662 Q8N976 141 aa11.16□□□□□ -0.62
USB1-211ENST00000565662 CTRLP40313 264 aa11.15□□□□□ -0.62
USB1-211ENST00000565662 ATRAIDQ6UW56 229 aa11.15□□□□□ -0.62
USB1-211ENST00000565662 CNFNQ9BYD5 112 aa11.15□□□□□ -0.62
USB1-211ENST00000565662 DPH3P1Q9H4G8 78 aa11.15□□□□□ -0.62
USB1-211ENST00000565662 KIF25-AS1Q9Y6Z4 181 aa11.15□□□□□ -0.62
USB1-211ENST00000565662 RAB19A4D1S5 217 aa11.14□□□□□ -0.63
USB1-211ENST00000565662 TMEM262E9PQX1 116 aa11.14□□□□□ -0.63
USB1-211ENST00000565662 C1orf43Q9BWL3 253 aa11.14□□□□□ -0.63
USB1-211ENST00000565662 RPP21Q9H633 154 aaKnown RBP11.14□□□□□ -0.63
USB1-211ENST00000565662 Q9UF83 564 aa11.14□□□□□ -0.63
USB1-211ENST00000565662 KLK12Q9UKR0 248 aa11.14□□□□□ -0.63
USB1-211ENST00000565662 DNAH5Q8TE73 4624 aa11.13□□□□□ -0.63
USB1-211ENST00000565662 TRBV20OR9-2A0A075B6H5 130 aa11.13□□□□□ -0.63
USB1-211ENST00000565662 IGKV2D-24A0A075B6R9 120 aa11.13□□□□□ -0.63
USB1-211ENST00000565662 EPM2AB3EWF7 344 aa11.13□□□□□ -0.63
USB1-211ENST00000565662 MGPP08493 103 aa11.13□□□□□ -0.63
USB1-211ENST00000565662 MIAQ16674 131 aa11.13□□□□□ -0.63
USB1-211ENST00000565662 TEX261Q6UWH6 196 aa11.13□□□□□ -0.63
USB1-211ENST00000565662 LYPD6BQ8NI32 183 aa11.13□□□□□ -0.63
USB1-211ENST00000565662 UBE2WQ96B02 151 aa11.13□□□□□ -0.63
USB1-211ENST00000565662 CHCHD5Q9BSY4 110 aa11.13□□□□□ -0.63
USB1-211ENST00000565662 HSPG2P98160 4391 aa11.12□□□□□ -0.63
USB1-211ENST00000565662 IGHV1-24A0A0C4DH33 117 aa11.12□□□□□ -0.63
USB1-211ENST00000565662 IQCJQ1A5X6 159 aa11.12□□□□□ -0.63
USB1-211ENST00000565662 CT83Q5H943 113 aa11.12□□□□□ -0.63
USB1-211ENST00000565662 RASL11AQ6T310 242 aa11.12□□□□□ -0.63
USB1-211ENST00000565662 ALKAL2Q6UX46 152 aa11.12□□□□□ -0.63
USB1-211ENST00000565662 PGLYRP4Q96LB8 373 aa11.12□□□□□ -0.63
USB1-211ENST00000565662 KRTAP17-1Q9BYP8 105 aa11.12□□□□□ -0.63
USB1-211ENST00000565662 M0QY20 66 aa11.11□□□□□ -0.63
USB1-211ENST00000565662 LYZL1Q6UWQ5 148 aa11.11□□□□□ -0.63
USB1-211ENST00000565662 FAM231DQ6ZW35 169 aa11.11□□□□□ -0.63
USB1-211ENST00000565662 NUDT10Q8NFP7 164 aa11.11□□□□□ -0.63
USB1-211ENST00000565662 NUDT11Q96G61 164 aa11.11□□□□□ -0.63
USB1-211ENST00000565662 FAM210AQ96ND0 272 aa11.11□□□□□ -0.63
USB1-211ENST00000565662 hCG_2014768A0A024R1R8 64 aa11.1□□□□□ -0.63
USB1-211ENST00000565662 MUC21A0A0G2JKD1 596 aa11.1□□□□□ -0.63
USB1-211ENST00000565662 MUC21A0A140T8X8 626 aa11.1□□□□□ -0.63
USB1-211ENST00000565662 A8MWL6 223 aa11.1□□□□□ -0.63
USB1-211ENST00000565662 ANGP03950 147 aaKnown RBP11.1□□□□□ -0.63
USB1-211ENST00000565662 GZMBP10144 247 aa11.1□□□□□ -0.63
USB1-211ENST00000565662 NTF3P20783 257 aa11.1□□□□□ -0.63
USB1-211ENST00000565662 KRTAP10-1P60331 282 aa11.1□□□□□ -0.63
USB1-211ENST00000565662 BORCS7Q96B45 105 aa11.1□□□□□ -0.63
USB1-211ENST00000565662 NIT2Q9NQR4 276 aa11.1□□□□□ -0.63
USB1-211ENST00000565662 PCLOQ9Y6V0 5065 aa11.09□□□□□ -0.63
USB1-211ENST00000565662 SUMO4Q6EEV6 95 aa11.09□□□□□ -0.63
USB1-211ENST00000565662 FAM229AH3BQW9 127 aa11.08□□□□□ -0.64
USB1-211ENST00000565662 SSTP61278 116 aa11.08□□□□□ -0.64
USB1-211ENST00000565662 TWIST1Q15672 202 aa11.08□□□□□ -0.64
USB1-211ENST00000565662 MPV17L2Q567V2 206 aa11.08□□□□□ -0.64
USB1-211ENST00000565662 Q8N3U1 123 aa11.08□□□□□ -0.64
USB1-211ENST00000565662 EIF5A2Q9GZV4 153 aaKnown RBP11.08□□□□□ -0.64
USB1-211ENST00000565662 GATCO43716 136 aaKnown RBP11.07□□□□□ -0.64
USB1-211ENST00000565662 XGP55808 180 aa11.07□□□□□ -0.64
USB1-211ENST00000565662 C15orf54Q8N8G6 183 aa11.07□□□□□ -0.64
USB1-211ENST00000565662 OCC1Q8TAD7 63 aa11.07□□□□□ -0.64
USB1-211ENST00000565662 APOBP04114 4563 aaKnown RBP11.07□□□□□ -0.64
USB1-211ENST00000565662 A0A1B0GUV1 79 aa11.06□□□□□ -0.64
USB1-211ENST00000565662 FAM231BA6NCW3 169 aa11.06□□□□□ -0.64
USB1-211ENST00000565662 UBE2L6O14933 153 aa11.06□□□□□ -0.64
USB1-211ENST00000565662 COTL1Q14019 142 aa11.06□□□□□ -0.64
USB1-211ENST00000565662 SMIM7Q9BQ49 75 aa11.06□□□□□ -0.64
USB1-211ENST00000565662 TMEM243Q9BU79 118 aa11.06□□□□□ -0.64
USB1-211ENST00000565662 GFRA4Q9GZZ7 299 aa11.06□□□□□ -0.64
USB1-211ENST00000565662 RNASE7Q9H1E1 156 aaKnown RBP11.06□□□□□ -0.64
USB1-211ENST00000565662 PRR34Q9NV39 138 aa11.06□□□□□ -0.64
USB1-211ENST00000565662 TRAV8-4A0A0B4J246 113 aa11.05□□□□□ -0.64
USB1-211ENST00000565662 K7EN84 100 aa11.05□□□□□ -0.64
USB1-211ENST00000565662 NCR2O95944 276 aa11.05□□□□□ -0.64
USB1-211ENST00000565662 NKX2-5P52952 324 aaPredicted RBP11.04□□□□□ -0.64
USB1-211ENST00000565662 FOXA3P55318 350 aaPredicted RBP11.04□□□□□ -0.64
USB1-211ENST00000565662 RBX1P62877 108 aa11.04□□□□□ -0.64
USB1-211ENST00000565662 FAM74A3Q4VXF1 159 aa11.04□□□□□ -0.64
USB1-211ENST00000565662 BAALCQ8WXS3 180 aa11.04□□□□□ -0.64
USB1-211ENST00000565662 H7C423 109 aa11.03□□□□□ -0.64
USB1-211ENST00000565662 Q5VSD8 79 aa11.03□□□□□ -0.64
USB1-211ENST00000565662 ENHOQ6UWT2 76 aa11.03□□□□□ -0.64
USB1-211ENST00000565662 Q6ZSA8 131 aa11.03□□□□□ -0.64
USB1-211ENST00000565662 NTM-AS1Q6ZSK4 140 aa11.03□□□□□ -0.64
USB1-211ENST00000565662 SMDT1Q9H4I9 107 aa11.03□□□□□ -0.64
USB1-211ENST00000565662 IGLV2-33A0A075B6J2 118 aaPredicted RBP11.02□□□□□ -0.65
USB1-211ENST00000565662 ZNF727A8MUV8 499 aa11.02□□□□□ -0.65
USB1-211ENST00000565662 FUSP35637 526 aaKnown RBP eCLIP11.02□□□□□ -0.65
USB1-211ENST00000565662 AMTP48728 403 aa11.02□□□□□ -0.65
USB1-211ENST00000565662 CEBPGP53567 150 aa11.02□□□□□ -0.65
USB1-211ENST00000565662 CLRN3Q8NCR9 226 aa11.02□□□□□ -0.65
USB1-211ENST00000565662 KRTAP4-5Q9BYR2 181 aa11.02□□□□□ -0.65
USB1-211ENST00000565662 LECT2O14960 151 aa11.01□□□□□ -0.65
USB1-211ENST00000565662 GAGE6Q13070 117 aa11.01□□□□□ -0.65
USB1-211ENST00000565662 LINC01551Q86U37 167 aa11.01□□□□□ -0.65
USB1-211ENST00000565662 TSKUQ8WUA8 353 aa11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 67.3 ms