RNA–Protein interactions for RNA: ENST00000564582.2

CHD9-210, Transcript of chromodomain helicase DNA binding protein 9, human

TSL 3

Gene CHD9, Length 968 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CHD9-210	ENST00000564582	ZNF80	P51504	273 aa	Predicted RBP	4.13	□□□□□ -1.75
CHD9-210	ENST00000564582	NPC2	P61916	151 aa		4.13	□□□□□ -1.75
CHD9-210	ENST00000564582	SFTA2	Q6UW10	78 aa		4.13	□□□□□ -1.75
CHD9-210	ENST00000564582	APRG1	Q8IVJ8	170 aa		4.13	□□□□□ -1.75
CHD9-210	ENST00000564582	TMEM61	Q8N0U2	210 aa		4.13	□□□□□ -1.75
CHD9-210	ENST00000564582	DEFB119	Q8N690	84 aa		4.13	□□□□□ -1.75
CHD9-210	ENST00000564582	KLHL30-AS1	Q8NEE0	82 aa		4.13	□□□□□ -1.75
CHD9-210	ENST00000564582	DPM3	Q9P2X0	92 aa		4.13	□□□□□ -1.75
CHD9-210	ENST00000564582	TP53TG1	Q9Y2A0	90 aa		4.13	□□□□□ -1.75
CHD9-210	ENST00000564582	SDK2	Q58EX2	2172 aa		4.13	□□□□□ -1.75
CHD9-210	ENST00000564582	FREM1	Q5H8C1	2179 aa		4.12	□□□□□ -1.75
CHD9-210	ENST00000564582	ASXL3	Q9C0F0	2248 aa		4.12	□□□□□ -1.75
CHD9-210	ENST00000564582	TRAV12-2	A0A075B6T6	113 aa		4.12	□□□□□ -1.75
CHD9-210	ENST00000564582	TRAV13-2	A0A0B4J235	113 aa		4.12	□□□□□ -1.75
CHD9-210	ENST00000564582	DNAL4	O96015	105 aa		4.12	□□□□□ -1.75
CHD9-210	ENST00000564582	IGHG2	P01859	326 aa		4.12	□□□□□ -1.75
CHD9-210	ENST00000564582	CCL4	P13236	92 aa		4.12	□□□□□ -1.75
CHD9-210	ENST00000564582	RNASE4	P34096	147 aa	Known RBP	4.12	□□□□□ -1.75
CHD9-210	ENST00000564582	MINOS1	Q5TGZ0	78 aa		4.12	□□□□□ -1.75
CHD9-210	ENST00000564582	DEFB108B	Q8NET1	73 aa		4.12	□□□□□ -1.75
CHD9-210	ENST00000564582	KIR2DL5B	Q8NHK3	375 aa		4.12	□□□□□ -1.75
CHD9-210	ENST00000564582	AMELX	Q99217	191 aa		4.12	□□□□□ -1.75
CHD9-210	ENST00000564582	KRTAP2-2	Q9BYT5	123 aa		4.12	□□□□□ -1.75
CHD9-210	ENST00000564582	DEFB127	Q9H1M4	99 aa		4.12	□□□□□ -1.75
CHD9-210	ENST00000564582	SPRR3	Q9UBC9	169 aa		4.12	□□□□□ -1.75
CHD9-210	ENST00000564582	SERP1	Q9Y6X1	66 aa		4.12	□□□□□ -1.75
CHD9-210	ENST00000564582	MINOS1-NBL1	R4GNA1	71 aa		4.12	□□□□□ -1.75
CHD9-210	ENST00000564582	DSCAML1	Q8TD84	2053 aa		4.11	□□□□□ -1.75
CHD9-210	ENST00000564582	LOC107984640	A0A0U1RRK4	108 aa		4.11	□□□□□ -1.75
CHD9-210	ENST00000564582	TINCR	A0A1B0GVN0	87 aa		4.11	□□□□□ -1.75
CHD9-210	ENST00000564582		I3L3M4	83 aa		4.11	□□□□□ -1.75
CHD9-210	ENST00000564582		M0R1B8	84 aa		4.11	□□□□□ -1.75
CHD9-210	ENST00000564582		M0R1W7	72 aa		4.11	□□□□□ -1.75
CHD9-210	ENST00000564582	CTSG	P08311	255 aa		4.11	□□□□□ -1.75
CHD9-210	ENST00000564582	GATA1	P15976	413 aa	Predicted RBP	4.11	□□□□□ -1.75
CHD9-210	ENST00000564582	CRIP2	P52943	208 aa	Predicted RBP	4.11	□□□□□ -1.75
CHD9-210	ENST00000564582	PMS2CL	Q68D20	193 aa		4.11	□□□□□ -1.75
CHD9-210	ENST00000564582	GPHB5	Q86YW7	130 aa		4.11	□□□□□ -1.75
CHD9-210	ENST00000564582	DYNAP	Q8N1N2	210 aa		4.11	□□□□□ -1.75
CHD9-210	ENST00000564582	EEF1AKMT3	Q96AZ1	226 aa		4.11	□□□□□ -1.75
CHD9-210	ENST00000564582	C2orf48	Q96LS8	159 aa		4.11	□□□□□ -1.75
CHD9-210	ENST00000564582	NDUFA12	Q9UI09	145 aa		4.11	□□□□□ -1.75
CHD9-210	ENST00000564582	CACNA1E	Q15878	2313 aa		4.1	□□□□□ -1.75
CHD9-210	ENST00000564582	SMIM26	A0A096LP01	95 aa		4.1	□□□□□ -1.75
CHD9-210	ENST00000564582	JMJD7-PLA2G4B	H0Y9G9	81 aa		4.1	□□□□□ -1.75
CHD9-210	ENST00000564582	LY6L	H3BQJ8	138 aa		4.1	□□□□□ -1.75
CHD9-210	ENST00000564582	TRGV3	P03979	118 aa		4.1	□□□□□ -1.75
CHD9-210	ENST00000564582	TFF1	P04155	84 aa		4.1	□□□□□ -1.75
CHD9-210	ENST00000564582	BAALC-AS2	P0C853	105 aa		4.1	□□□□□ -1.75
CHD9-210	ENST00000564582	CCL3L1	P16619	93 aa		4.1	□□□□□ -1.75
CHD9-210	ENST00000564582	LOX	P28300	417 aa	Predicted RBP	4.1	□□□□□ -1.75
CHD9-210	ENST00000564582	UBE2E1	P51965	193 aa		4.1	□□□□□ -1.75
CHD9-210	ENST00000564582	SYNJ2BP	P57105	145 aa		4.1	□□□□□ -1.75
CHD9-210	ENST00000564582	UNQ5830/PRO19650/PRO19816	Q6UY13	95 aa		4.1	□□□□□ -1.75
CHD9-210	ENST00000564582	SMIM29	Q86T20	159 aa		4.1	□□□□□ -1.75
CHD9-210	ENST00000564582	C20orf203	Q8NBC4	194 aa		4.1	□□□□□ -1.75
CHD9-210	ENST00000564582	KNTC1	P50748	2209 aa		4.1	□□□□□ -1.75
CHD9-210	ENST00000564582	CACNA1G	O43497	2377 aa		4.09	□□□□□ -1.75
CHD9-210	ENST00000564582	TRAV8-3	A0A0A6YYJ7	113 aa		4.09	□□□□□ -1.75
CHD9-210	ENST00000564582	FAM223B	A6NKX1	122 aa		4.09	□□□□□ -1.75
CHD9-210	ENST00000564582		H7C2G1	150 aa		4.09	□□□□□ -1.75
CHD9-210	ENST00000564582	SOCS3	O14543	225 aa		4.09	□□□□□ -1.75
CHD9-210	ENST00000564582	NDUFA1	O15239	70 aa		4.09	□□□□□ -1.75
CHD9-210	ENST00000564582	MGP	P08493	103 aa		4.09	□□□□□ -1.75
CHD9-210	ENST00000564582	IGHV3-30-3	P0DP02	117 aa		4.09	□□□□□ -1.75
CHD9-210	ENST00000564582	IGFL2	Q6UWQ7	119 aa		4.09	□□□□□ -1.75
CHD9-210	ENST00000564582	FAM223A	Q8IWN6	122 aa		4.09	□□□□□ -1.75
CHD9-210	ENST00000564582	C14orf178	Q8N769	122 aa	Predicted RBP	4.09	□□□□□ -1.75
CHD9-210	ENST00000564582		Q8TAT8	98 aa		4.09	□□□□□ -1.75
CHD9-210	ENST00000564582	SMAD5-AS1	Q9Y6J3	95 aa		4.09	□□□□□ -1.75
CHD9-210	ENST00000564582	IGLV5-45	A0A087WSX0	123 aa		4.08	□□□□□ -1.76
CHD9-210	ENST00000564582		A0A087WYN8	130 aa		4.08	□□□□□ -1.76
CHD9-210	ENST00000564582	IGHV3-21	A0A0B4J1V1	117 aa		4.08	□□□□□ -1.76
CHD9-210	ENST00000564582	KNCN	A6PVL3	124 aa		4.08	□□□□□ -1.76
CHD9-210	ENST00000564582		H3BUA1	57 aa		4.08	□□□□□ -1.76
CHD9-210	ENST00000564582	TSHB	P01222	138 aa		4.08	□□□□□ -1.76
CHD9-210	ENST00000564582	PDE6G	P18545	87 aa		4.08	□□□□□ -1.76
CHD9-210	ENST00000564582	DAZ2	Q13117	558 aa	Known RBP	4.08	□□□□□ -1.76
CHD9-210	ENST00000564582	DAZ4	Q86SG3	579 aa	Known RBP	4.08	□□□□□ -1.76
CHD9-210	ENST00000564582	JPT2	Q9H910	190 aa		4.08	□□□□□ -1.76
CHD9-210	ENST00000564582	DAZ1	Q9NQZ3	744 aa	Known RBP	4.08	□□□□□ -1.76
CHD9-210	ENST00000564582	DAZ3	Q9NR90	486 aa	Known RBP	4.08	□□□□□ -1.76
CHD9-210	ENST00000564582	KIF25-AS1	Q9Y6Z4	181 aa		4.08	□□□□□ -1.76
CHD9-210	ENST00000564582	GOLGB1	Q14789	3259 aa	Known RBP	4.07	□□□□□ -1.76
CHD9-210	ENST00000564582	RBMY1B	A6NDE4	496 aa	Known RBP	4.07	□□□□□ -1.76
CHD9-210	ENST00000564582	RBMY1E	A6NEQ0	496 aa	Known RBP	4.07	□□□□□ -1.76
CHD9-210	ENST00000564582		A8MZ25	164 aa		4.07	□□□□□ -1.76
CHD9-210	ENST00000564582	EPM2A	B3EWF7	344 aa		4.07	□□□□□ -1.76
CHD9-210	ENST00000564582	NDUFA4	O00483	81 aa		4.07	□□□□□ -1.76
CHD9-210	ENST00000564582	GAS8-AS1	O95177	125 aa		4.07	□□□□□ -1.76
CHD9-210	ENST00000564582	RBMY1D	P0C7P1	496 aa	Known RBP	4.07	□□□□□ -1.76
CHD9-210	ENST00000564582	RBMY1A1	P0DJD3	496 aa	Known RBP	4.07	□□□□□ -1.76
CHD9-210	ENST00000564582	RBMY1C	P0DJD4	496 aa		4.07	□□□□□ -1.76
CHD9-210	ENST00000564582	RPL28	P46779	137 aa	Known RBP	4.07	□□□□□ -1.76
CHD9-210	ENST00000564582	KLRB1	Q12918	225 aa		4.07	□□□□□ -1.76
CHD9-210	ENST00000564582	RBMY1F	Q15415	496 aa	Known RBP	4.07	□□□□□ -1.76
CHD9-210	ENST00000564582	ITLN2	Q8WWU7	325 aa	Predicted RBP	4.07	□□□□□ -1.76
CHD9-210	ENST00000564582	FAM19A4	Q96LR4	140 aa		4.07	□□□□□ -1.76
CHD9-210	ENST00000564582	LITAF	Q99732	161 aa		4.07	□□□□□ -1.76
CHD9-210	ENST00000564582	HES7	Q9BYE0	225 aa		4.07	□□□□□ -1.76

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