RNA–Protein interactions for RNA: ENST00000564047.1

SPG7-209, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 2

Gene SPG7, Length 422 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-209ENST00000564047 C18orf15Q96N68 181 aa9.2□□□□□ -0.94
SPG7-209ENST00000564047 AP1S3Q96PC3 154 aa9.2□□□□□ -0.94
SPG7-209ENST00000564047 CSMD3Q7Z407 3707 aa9.2□□□□□ -0.94
SPG7-209ENST00000564047 GAGE12BA1L429 117 aa9.19□□□□□ -0.94
SPG7-209ENST00000564047 GAGE7O76087 117 aa9.19□□□□□ -0.94
SPG7-209ENST00000564047 GAGE12FP0CL80 117 aa9.19□□□□□ -0.94
SPG7-209ENST00000564047 GAGE12GP0CL81 117 aa9.19□□□□□ -0.94
SPG7-209ENST00000564047 GAGE12IP0CL82 117 aa9.19□□□□□ -0.94
SPG7-209ENST00000564047 BTF3P20290 206 aaKnown RBP9.19□□□□□ -0.94
SPG7-209ENST00000564047 KRTAP17-1Q9BYP8 105 aa9.19□□□□□ -0.94
SPG7-209ENST00000564047 TMEM191AQ9H0A3 160 aa9.19□□□□□ -0.94
SPG7-209ENST00000564047 A0A0J9YWU9 116 aa9.18□□□□□ -0.94
SPG7-209ENST00000564047 C20orf202A1L168 122 aa9.18□□□□□ -0.94
SPG7-209ENST00000564047 RS1O15537 224 aa9.18□□□□□ -0.94
SPG7-209ENST00000564047 EVI2AP22794 236 aa9.18□□□□□ -0.94
SPG7-209ENST00000564047 C14orf178Q8N769 122 aaPredicted RBP9.18□□□□□ -0.94
SPG7-209ENST00000564047 JPT2Q9H910 190 aa9.18□□□□□ -0.94
SPG7-209ENST00000564047 CELA1Q9UNI1 258 aa9.18□□□□□ -0.94
SPG7-209ENST00000564047 TRGV2A0A075B6R0 118 aa9.17□□□□□ -0.94
SPG7-209ENST00000564047 TRAV4A0A0B4J268 109 aa9.17□□□□□ -0.94
SPG7-209ENST00000564047 IGHV1-24A0A0C4DH33 117 aa9.17□□□□□ -0.94
SPG7-209ENST00000564047 CIDEAO60543 219 aa9.17□□□□□ -0.94
SPG7-209ENST00000564047 PPBPP02775 128 aa9.17□□□□□ -0.94
SPG7-209ENST00000564047 CRYGDP07320 174 aa9.17□□□□□ -0.94
SPG7-209ENST00000564047 SMIM17P0DL12 118 aa9.17□□□□□ -0.94
SPG7-209ENST00000564047 DEFB130BP0DP73 79 aa9.17□□□□□ -0.94
SPG7-209ENST00000564047 DEFB130AP0DP74 79 aa9.17□□□□□ -0.94
SPG7-209ENST00000564047 CFAP126Q5VTH2 177 aa9.17□□□□□ -0.94
SPG7-209ENST00000564047 ORMDL3Q8N138 153 aa9.17□□□□□ -0.94
SPG7-209ENST00000564047 POM121L12Q8N7R1 296 aa9.17□□□□□ -0.94
SPG7-209ENST00000564047 OR4C5Q8NGB2 326 aa9.17□□□□□ -0.94
SPG7-209ENST00000564047 TMEM70Q9BUB7 260 aa9.17□□□□□ -0.94
SPG7-209ENST00000564047 DPH3P1Q9H4G8 78 aa9.17□□□□□ -0.94
SPG7-209ENST00000564047 LAMTOR2Q9Y2Q5 125 aa9.17□□□□□ -0.94
SPG7-209ENST00000564047 KIF25-AS1Q9Y6Z4 181 aa9.17□□□□□ -0.94
SPG7-209ENST00000564047 RHODO00212 210 aa9.16□□□□□ -0.94
SPG7-209ENST00000564047 LEPROTL1O95214 131 aa9.16□□□□□ -0.94
SPG7-209ENST00000564047 DAD1P61803 113 aa9.16□□□□□ -0.94
SPG7-209ENST00000564047 MRPL51Q4U2R6 128 aaKnown RBP9.16□□□□□ -0.94
SPG7-209ENST00000564047 ZFP2Q6ZN57 461 aa9.16□□□□□ -0.94
SPG7-209ENST00000564047 FA2HQ7L5A8 372 aa9.16□□□□□ -0.94
SPG7-209ENST00000564047 PRELID3AQ96N28 172 aa9.16□□□□□ -0.94
SPG7-209ENST00000564047 MIEN1Q9BRT3 115 aa9.16□□□□□ -0.94
SPG7-209ENST00000564047 C2orf88Q9BSF0 95 aa9.16□□□□□ -0.94
SPG7-209ENST00000564047 HSPB8Q9UJY1 196 aa9.16□□□□□ -0.94
SPG7-209ENST00000564047 MUC4Q99102 2169 aa9.16□□□□□ -0.94
SPG7-209ENST00000564047 A0A087WWL8 130 aa9.15□□□□□ -0.94
SPG7-209ENST00000564047 LINC00315P59091 139 aa9.15□□□□□ -0.94
SPG7-209ENST00000564047 UFSP1Q6NVU6 142 aa9.15□□□□□ -0.94
SPG7-209ENST00000564047 AP5S1Q9NUS5 200 aa9.15□□□□□ -0.94
SPG7-209ENST00000564047 HUWE1Q7Z6Z7 4374 aaKnown RBP9.15□□□□□ -0.95
SPG7-209ENST00000564047 D6R8Y8 96 aa9.14□□□□□ -0.95
SPG7-209ENST00000564047 C12orf74Q32Q52 190 aa9.14□□□□□ -0.95
SPG7-209ENST00000564047 CASC10Q5T4H9 136 aa9.14□□□□□ -0.95
SPG7-209ENST00000564047 FAM74A4Q5TZK3 123 aa9.14□□□□□ -0.95
SPG7-209ENST00000564047 PET117Q6UWS5 81 aa9.14□□□□□ -0.95
SPG7-209ENST00000564047 AMN1Q8IY45 258 aa9.14□□□□□ -0.95
SPG7-209ENST00000564047 PRSS3P2Q8NHM4 247 aa9.14□□□□□ -0.95
SPG7-209ENST00000564047 C11orf45Q8TAV5 145 aa9.14□□□□□ -0.95
SPG7-209ENST00000564047 RNF185Q96GF1 192 aa9.14□□□□□ -0.95
SPG7-209ENST00000564047 ZNF479Q96JC4 524 aa9.14□□□□□ -0.95
SPG7-209ENST00000564047 PAM16Q9Y3D7 125 aa9.14□□□□□ -0.95
SPG7-209ENST00000564047 LINC01546A6NGU7 62 aa9.13□□□□□ -0.95
SPG7-209ENST00000564047 SYS1-DBNDD2H3BUS1 97 aa9.13□□□□□ -0.95
SPG7-209ENST00000564047 IGHV3-53P01767 116 aa9.13□□□□□ -0.95
SPG7-209ENST00000564047 ATP5G1P05496 136 aa9.13□□□□□ -0.95
SPG7-209ENST00000564047 MGPP08493 103 aa9.13□□□□□ -0.95
SPG7-209ENST00000564047 SPATA45Q537H7 98 aa9.13□□□□□ -0.95
SPG7-209ENST00000564047 TRAV9-2A0A087WT02 112 aa9.12□□□□□ -0.95
SPG7-209ENST00000564047 IGHV3-73A0A0B4J1V6 119 aa9.12□□□□□ -0.95
SPG7-209ENST00000564047 M0R143 59 aa9.12□□□□□ -0.95
SPG7-209ENST00000564047 CKS2P33552 79 aa9.12□□□□□ -0.95
SPG7-209ENST00000564047 ZNF56Q15929 161 aa9.12□□□□□ -0.95
SPG7-209ENST00000564047 MUC7Q8TAX7 377 aa9.12□□□□□ -0.95
SPG7-209ENST00000564047 MAP1LC3CQ9BXW4 147 aa9.12□□□□□ -0.95
SPG7-209ENST00000564047 UQCR10Q9UDW1 63 aa9.12□□□□□ -0.95
SPG7-209ENST00000564047 HYDINQ4G0P3 5121 aa9.11□□□□□ -0.95
SPG7-209ENST00000564047 LCE6AA0A183 80 aa9.11□□□□□ -0.95
SPG7-209ENST00000564047 F5H697 171 aa9.11□□□□□ -0.95
SPG7-209ENST00000564047 FHL2Q14192 279 aa9.11□□□□□ -0.95
SPG7-209ENST00000564047 SPATA12Q7Z6I5 190 aa9.11□□□□□ -0.95
SPG7-209ENST00000564047 MRAP2Q96G30 205 aa9.11□□□□□ -0.95
SPG7-209ENST00000564047 EDA2RQ9HAV5 297 aa9.11□□□□□ -0.95
SPG7-209ENST00000564047 TRGV4A0A0C4DH28 118 aa9.1□□□□□ -0.95
SPG7-209ENST00000564047 TRBV6-4A0A1B0GX49 114 aa9.1□□□□□ -0.95
SPG7-209ENST00000564047 PRSS47A8MTI9 375 aa9.1□□□□□ -0.95
SPG7-209ENST00000564047 IGLC3P0DOY3 106 aa9.1□□□□□ -0.95
SPG7-209ENST00000564047 GATA1P15976 413 aaPredicted RBP9.1□□□□□ -0.95
SPG7-209ENST00000564047 IFI27P40305 119 aaPredicted RBP9.1□□□□□ -0.95
SPG7-209ENST00000564047 NANOS2P60321 138 aaKnown RBP9.1□□□□□ -0.95
SPG7-209ENST00000564047 SUMO4Q6EEV6 95 aa9.1□□□□□ -0.95
SPG7-209ENST00000564047 Q6ZTC4 211 aa9.1□□□□□ -0.95
SPG7-209ENST00000564047 MAP1LC3AQ9H492 121 aa9.1□□□□□ -0.95
SPG7-209ENST00000564047 STARD9Q9P2P6 4700 aa9.09□□□□□ -0.95
SPG7-209ENST00000564047 H7C1H1 209 aa9.09□□□□□ -0.95
SPG7-209ENST00000564047 M0QY20 66 aa9.09□□□□□ -0.95
SPG7-209ENST00000564047 NPYP01303 97 aa9.09□□□□□ -0.95
SPG7-209ENST00000564047 Q6ZSN1 163 aa9.09□□□□□ -0.95
SPG7-209ENST00000564047 ST20Q9HBF5 79 aa9.09□□□□□ -0.95
SPG7-209ENST00000564047 NXT2Q9NPJ8 142 aaKnown RBP9.09□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 78.1 ms