RNA–Protein interactions for RNA: ENST00000563790.5

HDGFL3-204, Transcript of HDGF like 3, humanhuman

TSL 3

Gene HDGFL3, Length 934 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFL3-204ENST00000563790 MBD2Q9UBB5 411 aa6.09□□□□□ -1.43
HDGFL3-204ENST00000563790 CENPXA8MT69 81 aa6.08□□□□□ -1.44
HDGFL3-204ENST00000563790 GCGP01275 180 aa6.08□□□□□ -1.44
HDGFL3-204ENST00000563790 LINC00173Q6ZV60 143 aa6.08□□□□□ -1.44
HDGFL3-204ENST00000563790 SUN5Q8TC36 379 aa6.08□□□□□ -1.44
HDGFL3-204ENST00000563790 KCNIP2Q9NS61 270 aa6.08□□□□□ -1.44
HDGFL3-204ENST00000563790 A8MWV9 139 aa6.07□□□□□ -1.44
HDGFL3-204ENST00000563790 SIX6O95475 246 aa6.07□□□□□ -1.44
HDGFL3-204ENST00000563790 MT-ND6P03923 174 aa6.07□□□□□ -1.44
HDGFL3-204ENST00000563790 TCRAP04437 139 aa6.07□□□□□ -1.44
HDGFL3-204ENST00000563790 C1orf137Q5JT78 98 aa6.07□□□□□ -1.44
HDGFL3-204ENST00000563790 OR10G7Q8NGN6 311 aa6.07□□□□□ -1.44
HDGFL3-204ENST00000563790 CMTM2Q8TAZ6 248 aa6.07□□□□□ -1.44
HDGFL3-204ENST00000563790 NMES1Q9C002 83 aa6.07□□□□□ -1.44
HDGFL3-204ENST00000563790 RPP21Q9H633 154 aaKnown RBP6.07□□□□□ -1.44
HDGFL3-204ENST00000563790 WFDC1Q9HC57 220 aa6.07□□□□□ -1.44
HDGFL3-204ENST00000563790 IGLV7-43P04211 117 aa6.06□□□□□ -1.44
HDGFL3-204ENST00000563790 TAS2R45P59539 299 aa6.06□□□□□ -1.44
HDGFL3-204ENST00000563790 PQLC2Q6ZP29 291 aa6.06□□□□□ -1.44
HDGFL3-204ENST00000563790 SVIPQ8NHG7 77 aa6.06□□□□□ -1.44
HDGFL3-204ENST00000563790 PSG8Q9UQ74 426 aa6.06□□□□□ -1.44
HDGFL3-204ENST00000563790 A0A096LNI7 61 aa6.05□□□□□ -1.44
HDGFL3-204ENST00000563790 C17orf112F2Z3M2 114 aa6.05□□□□□ -1.44
HDGFL3-204ENST00000563790 FGF8P55075 233 aaPredicted RBP6.05□□□□□ -1.44
HDGFL3-204ENST00000563790 H2BFSP57053 126 aa6.05□□□□□ -1.44
HDGFL3-204ENST00000563790 RAB2AP61019 212 aa6.05□□□□□ -1.44
HDGFL3-204ENST00000563790 UBE2D3P61077 147 aa6.05□□□□□ -1.44
HDGFL3-204ENST00000563790 UBE2D2P62837 147 aa6.05□□□□□ -1.44
HDGFL3-204ENST00000563790 KRTAP13-3Q3SY46 172 aa6.05□□□□□ -1.44
HDGFL3-204ENST00000563790 MPV17L2Q567V2 206 aa6.05□□□□□ -1.44
HDGFL3-204ENST00000563790 DNLZQ5SXM8 178 aa6.05□□□□□ -1.44
HDGFL3-204ENST00000563790 C5orf17Q8NAS9 161 aa6.05□□□□□ -1.44
HDGFL3-204ENST00000563790 PRR34Q9NV39 138 aa6.05□□□□□ -1.44
HDGFL3-204ENST00000563790 IL36BQ9NZH7 164 aa6.05□□□□□ -1.44
HDGFL3-204ENST00000563790 LINC00474Q9P2X8 69 aa6.05□□□□□ -1.44
HDGFL3-204ENST00000563790 HSPB11Q9Y547 144 aa6.05□□□□□ -1.44
HDGFL3-204ENST00000563790 IGLV10-54A0A075B6I4 117 aa6.04□□□□□ -1.44
HDGFL3-204ENST00000563790 SERTM2A0A1B0GWG4 89 aa6.04□□□□□ -1.44
HDGFL3-204ENST00000563790 HMGB3O15347 200 aaKnown RBP6.04□□□□□ -1.44
HDGFL3-204ENST00000563790 ARL14EPLP0DKL9 152 aa6.04□□□□□ -1.44
HDGFL3-204ENST00000563790 CRIP1P50238 77 aa6.04□□□□□ -1.44
HDGFL3-204ENST00000563790 FLI1Q01543 452 aaPredicted RBP6.04□□□□□ -1.44
HDGFL3-204ENST00000563790 LRRC37A5PQ49AS3 106 aa6.04□□□□□ -1.44
HDGFL3-204ENST00000563790 SMUG1Q53HV7 270 aa6.04□□□□□ -1.44
HDGFL3-204ENST00000563790 FAM74A1Q5RGS3 127 aa6.04□□□□□ -1.44
HDGFL3-204ENST00000563790 OR10G8Q8NGN5 311 aa6.04□□□□□ -1.44
HDGFL3-204ENST00000563790 KRTAP9-3Q9BYQ3 159 aa6.04□□□□□ -1.44
HDGFL3-204ENST00000563790 A0A087WX48 190 aa6.03□□□□□ -1.44
HDGFL3-204ENST00000563790 STAG3L2P0CL84 134 aa6.03□□□□□ -1.44
HDGFL3-204ENST00000563790 STAG3L3P0CL85 134 aa6.03□□□□□ -1.44
HDGFL3-204ENST00000563790 SUMO1P63165 101 aaKnown RBP6.03□□□□□ -1.44
HDGFL3-204ENST00000563790 LGALSLQ3ZCW2 172 aaPredicted RBP6.03□□□□□ -1.44
HDGFL3-204ENST00000563790 SFRP2Q96HF1 295 aa6.03□□□□□ -1.44
HDGFL3-204ENST00000563790 A0A087WWL8 130 aa6.02□□□□□ -1.45
HDGFL3-204ENST00000563790 TRBV6-8A0A0A6YYG3 113 aa6.02□□□□□ -1.45
HDGFL3-204ENST00000563790 TRBV10-1A0A0K0K1A3 114 aa6.02□□□□□ -1.45
HDGFL3-204ENST00000563790 H3BVH4 76 aa6.02□□□□□ -1.45
HDGFL3-204ENST00000563790 RHODO00212 210 aa6.02□□□□□ -1.45
HDGFL3-204ENST00000563790 CRPP02741 224 aa6.02□□□□□ -1.45
HDGFL3-204ENST00000563790 PRR27Q6MZM9 219 aa6.02□□□□□ -1.45
HDGFL3-204ENST00000563790 NTM-AS1Q6ZSK4 140 aa6.02□□□□□ -1.45
HDGFL3-204ENST00000563790 COX8CQ7Z4L0 72 aa6.02□□□□□ -1.45
HDGFL3-204ENST00000563790 C15orf54Q8N8G6 183 aa6.02□□□□□ -1.45
HDGFL3-204ENST00000563790 OR2G3Q8NGZ4 309 aa6.02□□□□□ -1.45
HDGFL3-204ENST00000563790 PPP1R1CQ8WVI7 109 aa6.02□□□□□ -1.45
HDGFL3-204ENST00000563790 NDFIP1Q9BT67 221 aa6.02□□□□□ -1.45
HDGFL3-204ENST00000563790 SMIM3Q9BZL3 60 aa6.02□□□□□ -1.45
HDGFL3-204ENST00000563790 EPDR1Q9UM22 224 aa6.02□□□□□ -1.45
HDGFL3-204ENST00000563790 TRBV7-3A0A075B6L6 115 aa6.01□□□□□ -1.45
HDGFL3-204ENST00000563790 CCDC160A6NGH7 325 aa6.01□□□□□ -1.45
HDGFL3-204ENST00000563790 KRBOX1C9JBD0 128 aa6.01□□□□□ -1.45
HDGFL3-204ENST00000563790 MPC2O95563 127 aa6.01□□□□□ -1.45
HDGFL3-204ENST00000563790 ARMS2P0C7Q2 107 aa6.01□□□□□ -1.45
HDGFL3-204ENST00000563790 GCHFRP30047 84 aa6.01□□□□□ -1.45
HDGFL3-204ENST00000563790 LINC00310P59036 64 aa6.01□□□□□ -1.45
HDGFL3-204ENST00000563790 MIAQ16674 131 aa6.01□□□□□ -1.45
HDGFL3-204ENST00000563790 PRNTQ86SH4 94 aa6.01□□□□□ -1.45
HDGFL3-204ENST00000563790 KRTAP2-2Q9BYT5 123 aa6.01□□□□□ -1.45
HDGFL3-204ENST00000563790 KRTAP2-1Q9BYU5 128 aa6.01□□□□□ -1.45
HDGFL3-204ENST00000563790 ARL2-SNX15V9GYD0 113 aa6.01□□□□□ -1.45
HDGFL3-204ENST00000563790 TRAV34A0A0B4J273 112 aa6□□□□□ -1.45
HDGFL3-204ENST00000563790 RPL12P30050 165 aaKnown RBP6□□□□□ -1.45
HDGFL3-204ENST00000563790 FAM74A4Q5TZK3 123 aa6□□□□□ -1.45
HDGFL3-204ENST00000563790 NEXN-AS1Q8NBZ9 246 aa6□□□□□ -1.45
HDGFL3-204ENST00000563790 RAB24Q969Q5 203 aa6□□□□□ -1.45
HDGFL3-204ENST00000563790 A0A1W2PPV4 95 aa5.99□□□□□ -1.45
HDGFL3-204ENST00000563790 FABP5P3A8MUU1 101 aa5.99□□□□□ -1.45
HDGFL3-204ENST00000563790 ANGP03950 147 aaKnown RBP5.99□□□□□ -1.45
HDGFL3-204ENST00000563790 S100A4P26447 101 aaKnown RBP5.99□□□□□ -1.45
HDGFL3-204ENST00000563790 CDC34P49427 236 aaPredicted RBP5.99□□□□□ -1.45
HDGFL3-204ENST00000563790 SAPCD1Q5SSQ6 148 aa5.99□□□□□ -1.45
HDGFL3-204ENST00000563790 Q86TA4 180 aa5.99□□□□□ -1.45
HDGFL3-204ENST00000563790 FAM240BA0A1B0GVZ2 78 aa5.98□□□□□ -1.45
HDGFL3-204ENST00000563790 GRIFINA4D1Z8 144 aa5.98□□□□□ -1.45
HDGFL3-204ENST00000563790 B4DEV8 164 aa5.98□□□□□ -1.45
HDGFL3-204ENST00000563790 RBX1P62877 108 aa5.98□□□□□ -1.45
HDGFL3-204ENST00000563790 RPL36AP83881 106 aaKnown RBP5.98□□□□□ -1.45
HDGFL3-204ENST00000563790 CYCSP99999 105 aaKnown RBP5.98□□□□□ -1.45
HDGFL3-204ENST00000563790 ZFP69Q49AA0 526 aa5.98□□□□□ -1.45
HDGFL3-204ENST00000563790 OR11H4Q8NGC9 324 aa5.98□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 233.5 ms