RNA–Protein interactions for RNA: ENST00000561940.1

SMG1-204, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 2

Gene SMG1, Length 964 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-204ENST00000561940 C4orf22Q6V702 233 aa2.02□□□□□ -2.09
SMG1-204ENST00000561940 GRINAQ7Z429 371 aa2.02□□□□□ -2.09
SMG1-204ENST00000561940 LYG2Q86SG7 212 aa2.02□□□□□ -2.09
SMG1-204ENST00000561940 SLAMF6Q96DU3 332 aa2.02□□□□□ -2.09
SMG1-204ENST00000561940 LINC00467Q9BRT7 94 aa2.02□□□□□ -2.09
SMG1-204ENST00000561940 PRADC1Q9BSG0 188 aa2.02□□□□□ -2.09
SMG1-204ENST00000561940 SH3BGRL3Q9H299 93 aa2.02□□□□□ -2.09
SMG1-204ENST00000561940 KMT2AQ03164 3969 aa2.02□□□□□ -2.09
SMG1-204ENST00000561940 ALMS1Q8TCU4 4167 aa2.01□□□□□ -2.09
SMG1-204ENST00000561940 DNAH10Q8IVF4 4471 aa2.01□□□□□ -2.09
SMG1-204ENST00000561940 IGKV2-40A0A087WW87 121 aaPredicted RBP2.01□□□□□ -2.09
SMG1-204ENST00000561940 H3BSH0 61 aa2.01□□□□□ -2.09
SMG1-204ENST00000561940 TAX1BP3O14907 124 aa2.01□□□□□ -2.09
SMG1-204ENST00000561940 IGKV2D-40P01614 121 aaPredicted RBP2.01□□□□□ -2.09
SMG1-204ENST00000561940 RNASE10Q5GAN6 216 aaKnown RBP2.01□□□□□ -2.09
SMG1-204ENST00000561940 C1orf134Q5TEV5 83 aa2.01□□□□□ -2.09
SMG1-204ENST00000561940 C10orf99Q6UWK7 81 aa2.01□□□□□ -2.09
SMG1-204ENST00000561940 UNQ6190/PRO20217Q6UXQ8 127 aa2.01□□□□□ -2.09
SMG1-204ENST00000561940 OR10J5Q8NHC4 309 aa2.01□□□□□ -2.09
SMG1-204ENST00000561940 CANT1Q8WVQ1 401 aa2.01□□□□□ -2.09
SMG1-204ENST00000561940 GINS3Q9BRX5 216 aa2.01□□□□□ -2.09
SMG1-204ENST00000561940 OR2J1Q9GZK6 312 aa2.01□□□□□ -2.09
SMG1-204ENST00000561940 C6orf62Q9GZU0 229 aaPredicted RBP2.01□□□□□ -2.09
SMG1-204ENST00000561940 BCL2L10Q9HD36 194 aa2.01□□□□□ -2.09
SMG1-204ENST00000561940 C14orf132Q9NPU4 83 aa2.01□□□□□ -2.09
SMG1-204ENST00000561940 APLNQ9ULZ1 77 aa2.01□□□□□ -2.09
SMG1-204ENST00000561940 DNAH11Q96DT5 4516 aa2.01□□□□□ -2.09
SMG1-204ENST00000561940 DUXBA0A1W2PPF3 345 aa2□□□□□ -2.09
SMG1-204ENST00000561940 TMEM238C9JI98 176 aa2□□□□□ -2.09
SMG1-204ENST00000561940 RNASE4P34096 147 aaKnown RBP2□□□□□ -2.09
SMG1-204ENST00000561940 POLR2HP52434 150 aaKnown RBP2□□□□□ -2.09
SMG1-204ENST00000561940 UBE2BP63146 152 aa2□□□□□ -2.09
SMG1-204ENST00000561940 PDE6HQ13956 83 aa2□□□□□ -2.09
SMG1-204ENST00000561940 SURF2Q15527 256 aaPredicted RBP2□□□□□ -2.09
SMG1-204ENST00000561940 COMMD6Q7Z4G1 85 aa2□□□□□ -2.09
SMG1-204ENST00000561940 STAG3L4Q8TBR4 150 aa2□□□□□ -2.09
SMG1-204ENST00000561940 DEFB104AQ8WTQ1 72 aa2□□□□□ -2.09
SMG1-204ENST00000561940 C4orf3Q8WVX3 66 aa2□□□□□ -2.09
SMG1-204ENST00000561940 OR4C12Q96R67 309 aa2□□□□□ -2.09
SMG1-204ENST00000561940 PBOV1Q9GZY1 135 aa2□□□□□ -2.09
SMG1-204ENST00000561940 GID8Q9NWU2 228 aa2□□□□□ -2.09
SMG1-204ENST00000561940 SNURFQ9Y675 71 aa2□□□□□ -2.09
SMG1-204ENST00000561940 HMCN2Q8NDA2 5059 aa1.99□□□□□ -2.09
SMG1-204ENST00000561940 TNCP24821 2201 aa1.99□□□□□ -2.09
SMG1-204ENST00000561940 A0A096LPI6 279 aa1.99□□□□□ -2.09
SMG1-204ENST00000561940 NDUFB3O43676 98 aa1.99□□□□□ -2.09
SMG1-204ENST00000561940 IGLV1-51P01701 117 aa1.99□□□□□ -2.09
SMG1-204ENST00000561940 ASIPP42127 132 aa1.99□□□□□ -2.09
SMG1-204ENST00000561940 RAB4BP61018 213 aa1.99□□□□□ -2.09
SMG1-204ENST00000561940 GNG3P63215 75 aa1.99□□□□□ -2.09
SMG1-204ENST00000561940 KLRD1Q13241 179 aa1.99□□□□□ -2.09
SMG1-204ENST00000561940 STX12Q86Y82 276 aa1.99□□□□□ -2.09
SMG1-204ENST00000561940 SFT2D1Q8WV19 159 aa1.99□□□□□ -2.09
SMG1-204ENST00000561940 TEX37Q96LM6 180 aa1.99□□□□□ -2.09
SMG1-204ENST00000561940 POPDC3Q9HBV1 291 aa1.99□□□□□ -2.09
SMG1-204ENST00000561940 DYNC1H1Q14204 4646 aaKnown RBP1.98□□□□□ -2.09
SMG1-204ENST00000561940 MUC2Q02817 5179 aa1.98□□□□□ -2.09
SMG1-204ENST00000561940 C2orf70A6NJV1 201 aa1.98□□□□□ -2.09
SMG1-204ENST00000561940 RIIAD1A6NNX1 92 aa1.98□□□□□ -2.09
SMG1-204ENST00000561940 M0R2N4 97 aa1.98□□□□□ -2.09
SMG1-204ENST00000561940 OR8B8Q15620 311 aa1.98□□□□□ -2.09
SMG1-204ENST00000561940 MINOS1Q5TGZ0 78 aa1.98□□□□□ -2.09
SMG1-204ENST00000561940 TRIQKQ629K1 86 aa1.98□□□□□ -2.09
SMG1-204ENST00000561940 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP1.98□□□□□ -2.09
SMG1-204ENST00000561940 IFT20Q8IY31 132 aa1.98□□□□□ -2.09
SMG1-204ENST00000561940 GPER1Q99527 375 aa1.98□□□□□ -2.09
SMG1-204ENST00000561940 BIN3Q9NQY0 253 aa1.98□□□□□ -2.09
SMG1-204ENST00000561940 NOP16Q9Y3C1 178 aaKnown RBP1.98□□□□□ -2.09
SMG1-204ENST00000561940 RNF11Q9Y3C5 154 aa1.98□□□□□ -2.09
SMG1-204ENST00000561940 RNF213Q63HN8 5207 aa1.98□□□□□ -2.09
SMG1-204ENST00000561940 MYCBP2O75592 4640 aa1.97□□□□□ -2.09
SMG1-204ENST00000561940 IGKV3-7A0A075B6H7 116 aa1.97□□□□□ -2.09
SMG1-204ENST00000561940 TRAV12-1A0A0B4J245 112 aa1.97□□□□□ -2.09
SMG1-204ENST00000561940 GNG14A0A1W2PPG7 69 aa1.97□□□□□ -2.09
SMG1-204ENST00000561940 A8MWV9 139 aa1.97□□□□□ -2.09
SMG1-204ENST00000561940 HYPMO75409 117 aa1.97□□□□□ -2.09
SMG1-204ENST00000561940 CAV3P56539 151 aa1.97□□□□□ -2.09
SMG1-204ENST00000561940 TAS2R41P59536 307 aa1.97□□□□□ -2.09
SMG1-204ENST00000561940 DEFB136Q30KP8 78 aa1.97□□□□□ -2.09
SMG1-204ENST00000561940 C1orf140Q5VVS0 124 aa1.97□□□□□ -2.09
SMG1-204ENST00000561940 EIF5AL1Q6IS14 154 aaKnown RBP1.97□□□□□ -2.09
SMG1-204ENST00000561940 OR9Q1Q8NGQ5 310 aa1.97□□□□□ -2.09
SMG1-204ENST00000561940 NEK7Q8TDX7 302 aa1.97□□□□□ -2.09
SMG1-204ENST00000561940 CCDC115Q96NT0 180 aa1.97□□□□□ -2.09
SMG1-204ENST00000561940 SDF2Q99470 211 aa1.97□□□□□ -2.09
SMG1-204ENST00000561940 SLC25A21Q9BQT8 299 aaPredicted RBP1.97□□□□□ -2.09
SMG1-204ENST00000561940 TMEM126AQ9H061 195 aa1.97□□□□□ -2.09
SMG1-204ENST00000561940 V9GYQ6 96 aa1.97□□□□□ -2.09
SMG1-204ENST00000561940 TRAV3A0A0B4J244 114 aa1.96□□□□□ -2.1
SMG1-204ENST00000561940 TIMM17BO60830 172 aa1.96□□□□□ -2.1
SMG1-204ENST00000561940 GYPAP02724 150 aa1.96□□□□□ -2.1
SMG1-204ENST00000561940 NFYBP25208 207 aa1.96□□□□□ -2.1
SMG1-204ENST00000561940 GNG10P50151 68 aa1.96□□□□□ -2.1
SMG1-204ENST00000561940 PCBD1P61457 104 aa1.96□□□□□ -2.1
SMG1-204ENST00000561940 VBP1P61758 197 aa1.96□□□□□ -2.1
SMG1-204ENST00000561940 PRB3Q04118 309 aaPredicted RBP1.96□□□□□ -2.1
SMG1-204ENST00000561940 LELP1Q5T871 98 aa1.96□□□□□ -2.1
SMG1-204ENST00000561940 STX19Q8N4C7 294 aa1.96□□□□□ -2.1
SMG1-204ENST00000561940 MYOZ3Q8TDC0 251 aa1.96□□□□□ -2.1
SMG1-204ENST00000561940 SS18L2Q9UHA2 77 aa1.96□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 87 ms