RNA–Protein interactions for RNA: ENST00000561305.1

CASC4-211, Transcript of cancer susceptibility 4, humanhuman

TSL 5

Gene CASC4, Length 353 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-211ENST00000561305 MORN4Q8NDC4 146 aa-2.09□□□□□ -2.74
CASC4-211ENST00000561305 TRAPPC8Q9Y2L5 1435 aa-2.09□□□□□ -2.74
CASC4-211ENST00000561305 PTPN23Q9H3S7 1636 aa-2.09□□□□□ -2.74
CASC4-211ENST00000561305 XIRP1Q702N8 1843 aaKnown RBP-2.1□□□□□ -2.74
CASC4-211ENST00000561305 TRAV2A0A0B4J234 112 aa-2.1□□□□□ -2.75
CASC4-211ENST00000561305 BLCAPP62952 87 aa-2.1□□□□□ -2.75
CASC4-211ENST00000561305 BAGE3Q86Y29 109 aa-2.1□□□□□ -2.75
CASC4-211ENST00000561305 TEX29Q8N6K0 151 aa-2.1□□□□□ -2.75
CASC4-211ENST00000561305 OTOSQ8NHW6 89 aa-2.1□□□□□ -2.75
CASC4-211ENST00000561305 SH3BGRL3Q9H299 93 aa-2.1□□□□□ -2.75
CASC4-211ENST00000561305 OTORQ9NRC9 128 aa-2.1□□□□□ -2.75
CASC4-211ENST00000561305 SSR3Q9UNL2 185 aa-2.1□□□□□ -2.75
CASC4-211ENST00000561305 NDUFAF1Q9Y375 327 aa-2.1□□□□□ -2.75
CASC4-211ENST00000561305 ANKRD31Q8N7Z5 1873 aa-2.1□□□□□ -2.75
CASC4-211ENST00000561305 COL4A6Q14031 1691 aa-2.11□□□□□ -2.75
CASC4-211ENST00000561305 TRAV16A0A0A6YYK6 109 aaPredicted RBP-2.11□□□□□ -2.75
CASC4-211ENST00000561305 MAP1LC3B2A6NCE7 125 aa-2.11□□□□□ -2.75
CASC4-211ENST00000561305 PGRMC1O00264 195 aaKnown RBP-2.11□□□□□ -2.75
CASC4-211ENST00000561305 CKS2P33552 79 aa-2.11□□□□□ -2.75
CASC4-211ENST00000561305 OR51A4Q8NGJ6 313 aa-2.11□□□□□ -2.75
CASC4-211ENST00000561305 LYRM2Q9NU23 88 aaPredicted RBP-2.11□□□□□ -2.75
CASC4-211ENST00000561305 ERG28Q9UKR5 140 aa-2.11□□□□□ -2.75
CASC4-211ENST00000561305 A0A0C4DFX4 3053 aa-2.11□□□□□ -2.75
CASC4-211ENST00000561305 IBTKQ9P2D0 1353 aaPredicted RBP-2.11□□□□□ -2.75
CASC4-211ENST00000561305 CCDC171Q6TFL3 1326 aa-2.12□□□□□ -2.75
CASC4-211ENST00000561305 ABCA13Q86UQ4 5058 aa-2.12□□□□□ -2.75
CASC4-211ENST00000561305 H0YGG7 62 aa-2.12□□□□□ -2.75
CASC4-211ENST00000561305 H3BNG1 76 aa-2.12□□□□□ -2.75
CASC4-211ENST00000561305 H3BQV1 296 aa-2.12□□□□□ -2.75
CASC4-211ENST00000561305 SMIM6P0DI80 62 aa-2.12□□□□□ -2.75
CASC4-211ENST00000561305 SLC25A6P12236 298 aa-2.12□□□□□ -2.75
CASC4-211ENST00000561305 RPL19P84098 196 aaKnown RBP-2.12□□□□□ -2.75
CASC4-211ENST00000561305 SPCS2Q15005 226 aa-2.12□□□□□ -2.75
CASC4-211ENST00000561305 RGS21Q2M5E4 152 aa-2.12□□□□□ -2.75
CASC4-211ENST00000561305 AKR1C8PQ5T2L2 129 aa-2.12□□□□□ -2.75
CASC4-211ENST00000561305 TAS2R8Q9NYW2 309 aa-2.12□□□□□ -2.75
CASC4-211ENST00000561305 LAMTOR3Q9UHA4 124 aa-2.12□□□□□ -2.75
CASC4-211ENST00000561305 FAM135BQ49AJ0 1406 aa-2.12□□□□□ -2.75
CASC4-211ENST00000561305 LRRC37A2A6NM11 1700 aa-2.12□□□□□ -2.75
CASC4-211ENST00000561305 CCDC168Q8NDH2 2452 aa-2.12□□□□□ -2.75
CASC4-211ENST00000561305 KIF13AQ9H1H9 1805 aa-2.12□□□□□ -2.75
CASC4-211ENST00000561305 DOCK1Q14185 1865 aa-2.13□□□□□ -2.75
CASC4-211ENST00000561305 TRBV27A0A0K0K1C4 114 aa-2.13□□□□□ -2.75
CASC4-211ENST00000561305 FABP2P12104 132 aa-2.13□□□□□ -2.75
CASC4-211ENST00000561305 CDKN2CP42773 168 aa-2.13□□□□□ -2.75
CASC4-211ENST00000561305 MRPS15P82914 257 aaKnown RBP-2.13□□□□□ -2.75
CASC4-211ENST00000561305 TMEM91Q6ZNR0 172 aa-2.13□□□□□ -2.75
CASC4-211ENST00000561305 SLC25A26Q70HW3 274 aa-2.13□□□□□ -2.75
CASC4-211ENST00000561305 LRTM1Q9HBL6 345 aa-2.13□□□□□ -2.75
CASC4-211ENST00000561305 PARP14Q460N5 1801 aa-2.13□□□□□ -2.75
CASC4-211ENST00000561305 ARFGEF1Q9Y6D6 1849 aa-2.13□□□□□ -2.75
CASC4-211ENST00000561305 GOLGA4Q13439 2230 aaKnown RBP-2.13□□□□□ -2.75
CASC4-211ENST00000561305 SLIT1O75093 1534 aa-2.13□□□□□ -2.75
CASC4-211ENST00000561305 TRAV12-3A0A0B4J271 114 aa-2.14□□□□□ -2.75
CASC4-211ENST00000561305 IFNGP01579 166 aa-2.14□□□□□ -2.75
CASC4-211ENST00000561305 PPP1R14BQ96C90 147 aa-2.14□□□□□ -2.75
CASC4-211ENST00000561305 CARD19Q96LW7 228 aa-2.14□□□□□ -2.75
CASC4-211ENST00000561305 ARL2BPQ9Y2Y0 163 aa-2.14□□□□□ -2.75
CASC4-211ENST00000561305 MRC1P22897 1456 aa-2.14□□□□□ -2.75
CASC4-211ENST00000561305 MTORP42345 2549 aa-2.15□□□□□ -2.75
CASC4-211ENST00000561305 NBEAQ8NFP9 2946 aa-2.15□□□□□ -2.75
CASC4-211ENST00000561305 CAMSAP1Q5T5Y3 1602 aa-2.15□□□□□ -2.75
CASC4-211ENST00000561305 PNMA8CA0A1B0GUJ8 204 aa-2.15□□□□□ -2.75
CASC4-211ENST00000561305 FAM92AA1XBS5 289 aa-2.15□□□□□ -2.75
CASC4-211ENST00000561305 CSN2P05814 226 aa-2.15□□□□□ -2.75
CASC4-211ENST00000561305 PPP1R2P41236 205 aa-2.15□□□□□ -2.75
CASC4-211ENST00000561305 LSM3P62310 102 aaKnown RBP-2.15□□□□□ -2.75
CASC4-211ENST00000561305 BORCS8Q96FH0 119 aa-2.15□□□□□ -2.75
CASC4-211ENST00000561305 APLNQ9ULZ1 77 aa-2.15□□□□□ -2.75
CASC4-211ENST00000561305 KIAA0556O60303 1618 aa-2.16□□□□□ -2.75
CASC4-211ENST00000561305 MYH1P12882 1939 aa-2.16□□□□□ -2.76
CASC4-211ENST00000561305 MYH2Q9UKX2 1941 aa-2.16□□□□□ -2.76
CASC4-211ENST00000561305 ITPR1Q14643 2758 aa-2.16□□□□□ -2.76
CASC4-211ENST00000561305 SYS1-DBNDD2H3BUS1 97 aa-2.16□□□□□ -2.76
CASC4-211ENST00000561305 NIPSNAP2O75323 286 aa-2.16□□□□□ -2.76
CASC4-211ENST00000561305 COX8AP10176 69 aa-2.16□□□□□ -2.76
CASC4-211ENST00000561305 SRP9P49458 86 aaKnown RBP-2.16□□□□□ -2.76
CASC4-211ENST00000561305 PLGLB1Q02325 96 aa-2.16□□□□□ -2.76
CASC4-211ENST00000561305 CROCCP2Q86T23 111 aa-2.16□□□□□ -2.76
CASC4-211ENST00000561305 RELNP78509 3460 aa-2.16□□□□□ -2.76
CASC4-211ENST00000561305 CLPSL1A2RUU4 121 aa-2.17□□□□□ -2.76
CASC4-211ENST00000561305 CCDC179H3BU77 68 aa-2.17□□□□□ -2.76
CASC4-211ENST00000561305 ATG12O94817 140 aa-2.17□□□□□ -2.76
CASC4-211ENST00000561305 BASP1P80723 227 aaKnown RBP-2.17□□□□□ -2.76
CASC4-211ENST00000561305 H1FX-AS1Q4G0G2 97 aa-2.17□□□□□ -2.76
CASC4-211ENST00000561305 Q6JHZ5 121 aa-2.17□□□□□ -2.76
CASC4-211ENST00000561305 DYNLRB2Q8TF09 96 aa-2.17□□□□□ -2.76
CASC4-211ENST00000561305 SMIM4Q8WVI0 70 aa-2.17□□□□□ -2.76
CASC4-211ENST00000561305 TECPR2O15040 1411 aa-2.17□□□□□ -2.76
CASC4-211ENST00000561305 UTP20O75691 2785 aaKnown RBP-2.18□□□□□ -2.76
CASC4-211ENST00000561305 HBDP02042 147 aa-2.18□□□□□ -2.76
CASC4-211ENST00000561305 S100A6P06703 90 aa-2.18□□□□□ -2.76
CASC4-211ENST00000561305 SDC2P34741 201 aa-2.18□□□□□ -2.76
CASC4-211ENST00000561305 PCBD1P61457 104 aa-2.18□□□□□ -2.76
CASC4-211ENST00000561305 LRRC37A3O60309 1634 aa-2.18□□□□□ -2.76
CASC4-211ENST00000561305 TRIOO75962 3097 aa-2.19□□□□□ -2.76
CASC4-211ENST00000561305 TRAV13-1A0A0B4J241 112 aa-2.19□□□□□ -2.76
CASC4-211ENST00000561305 TRDV1A0A1B0GX56 115 aa-2.19□□□□□ -2.76
CASC4-211ENST00000561305 PITX3O75364 302 aa-2.19□□□□□ -2.76
CASC4-211ENST00000561305 CRYGSP22914 178 aa-2.19□□□□□ -2.76
Retrieved 100 of 20,778 RNA–protein pairs in 82.5 ms