RNA–Protein interactions for RNA: ENST00000559886.1

HERC1-205, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 1 (best)

Gene HERC1, Length 2,462 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-205ENST00000559886 MAP1LC3AQ9H492 121 aa8.61□□□□□ -1.03
HERC1-205ENST00000559886 COL7A1Q02388 2944 aa8.61□□□□□ -1.03
HERC1-205ENST00000559886 TRGV4A0A0C4DH28 118 aa8.61□□□□□ -1.03
HERC1-205ENST00000559886 TRBV6-5A0A0K0K1A5 114 aa8.61□□□□□ -1.03
HERC1-205ENST00000559886 P0DMU3 169 aa8.6□□□□□ -1.03
HERC1-205ENST00000559886 FAM231AP0DMU4 169 aa8.6□□□□□ -1.03
HERC1-205ENST00000559886 FAM231CP0DMU5 169 aa8.6□□□□□ -1.03
HERC1-205ENST00000559886 SUMO2P61956 95 aaKnown RBP8.6□□□□□ -1.03
HERC1-205ENST00000559886 C12orf74Q32Q52 190 aa8.6□□□□□ -1.03
HERC1-205ENST00000559886 SLC25A29Q8N8R3 303 aa8.6□□□□□ -1.03
HERC1-205ENST00000559886 LOC389332A0A1B0GUA5 103 aa8.6□□□□□ -1.03
HERC1-205ENST00000559886 TRBV6-4A0A1B0GX49 114 aa8.6□□□□□ -1.03
HERC1-205ENST00000559886 HOXA5P20719 270 aa8.6□□□□□ -1.03
HERC1-205ENST00000559886 LINC00310P59036 64 aa8.6□□□□□ -1.03
HERC1-205ENST00000559886 ST20Q9HBF5 79 aa8.6□□□□□ -1.03
HERC1-205ENST00000559886 Q9UF83 564 aa8.6□□□□□ -1.03
HERC1-205ENST00000559886 K7EQD1 137 aa8.59□□□□□ -1.03
HERC1-205ENST00000559886 ATP5G1P05496 136 aa8.59□□□□□ -1.03
HERC1-205ENST00000559886 NHLRC4P0CG21 123 aaPredicted RBP8.59□□□□□ -1.03
HERC1-205ENST00000559886 IFI27P40305 119 aaPredicted RBP8.59□□□□□ -1.03
HERC1-205ENST00000559886 NIT1Q86X76 327 aa8.59□□□□□ -1.03
HERC1-205ENST00000559886 URB1-AS1Q96HZ7 61 aa8.59□□□□□ -1.03
HERC1-205ENST00000559886 TRBV10-1A0A0K0K1A3 114 aa8.59□□□□□ -1.03
HERC1-205ENST00000559886 C5orf52A6NGY3 159 aa8.59□□□□□ -1.03
HERC1-205ENST00000559886 SERF1AO75920 110 aa8.59□□□□□ -1.03
HERC1-205ENST00000559886 RPL32P62910 135 aaKnown RBP8.59□□□□□ -1.03
HERC1-205ENST00000559886 NEXN-AS1Q8NBZ9 246 aa8.59□□□□□ -1.03
HERC1-205ENST00000559886 PRSS3P2Q8NHM4 247 aa8.59□□□□□ -1.03
HERC1-205ENST00000559886 HHLA3Q9XRX5 114 aa8.59□□□□□ -1.03
HERC1-205ENST00000559886 IGLV2-18A0A075B6J9 118 aa8.58□□□□□ -1.04
HERC1-205ENST00000559886 LINC00614P0C842 121 aa8.58□□□□□ -1.04
HERC1-205ENST00000559886 POLR2KP53803 58 aaKnown RBP8.58□□□□□ -1.04
HERC1-205ENST00000559886 SNRPEP62304 92 aaKnown RBP8.58□□□□□ -1.04
HERC1-205ENST00000559886 DNAJC30Q96LL9 226 aa8.58□□□□□ -1.04
HERC1-205ENST00000559886 TMEM70Q9BUB7 260 aa8.58□□□□□ -1.04
HERC1-205ENST00000559886 SMIM2Q9BVW6 85 aa8.58□□□□□ -1.04
HERC1-205ENST00000559886 NXT2Q9NPJ8 142 aaKnown RBP8.58□□□□□ -1.04
HERC1-205ENST00000559886 SDHAF1A6NFY7 115 aa8.58□□□□□ -1.04
HERC1-205ENST00000559886 NUPR1O60356 82 aa8.58□□□□□ -1.04
HERC1-205ENST00000559886 Q8N8P6 123 aa8.58□□□□□ -1.04
HERC1-205ENST00000559886 C11orf45Q8TAV5 145 aa8.58□□□□□ -1.04
HERC1-205ENST00000559886 TNFRSF18Q9Y5U5 241 aa8.58□□□□□ -1.04
HERC1-205ENST00000559886 ESDP10768 282 aa8.57□□□□□ -1.04
HERC1-205ENST00000559886 PMCHP20382 165 aa8.57□□□□□ -1.04
HERC1-205ENST00000559886 RHOHQ15669 191 aa8.57□□□□□ -1.04
HERC1-205ENST00000559886 PRO0255Q9UI72 69 aa8.57□□□□□ -1.04
HERC1-205ENST00000559886 CRYBA4P53673 196 aa8.57□□□□□ -1.04
HERC1-205ENST00000559886 RNASEKQ6P5S7 137 aaKnown RBP8.57□□□□□ -1.04
HERC1-205ENST00000559886 FA2HQ7L5A8 372 aa8.57□□□□□ -1.04
HERC1-205ENST00000559886 CHCHD1Q96BP2 118 aaKnown RBP8.57□□□□□ -1.04
HERC1-205ENST00000559886 TRBV27A0A0K0K1C4 114 aa8.56□□□□□ -1.04
HERC1-205ENST00000559886 LINC01546A6NGU7 62 aa8.56□□□□□ -1.04
HERC1-205ENST00000559886 VCYO14598 125 aa8.56□□□□□ -1.04
HERC1-205ENST00000559886 Q6ZTC4 211 aa8.56□□□□□ -1.04
HERC1-205ENST00000559886 PRADC1Q9BSG0 188 aa8.56□□□□□ -1.04
HERC1-205ENST00000559886 AP5S1Q9NUS5 200 aa8.56□□□□□ -1.04
HERC1-205ENST00000559886 TRBV7-3A0A075B6L6 115 aa8.56□□□□□ -1.04
HERC1-205ENST00000559886 NANOS2P60321 138 aaKnown RBP8.56□□□□□ -1.04
HERC1-205ENST00000559886 RPL36AP83881 106 aaKnown RBP8.56□□□□□ -1.04
HERC1-205ENST00000559886 RPL36ALQ969Q0 106 aaKnown RBP8.56□□□□□ -1.04
HERC1-205ENST00000559886 F5H768 121 aa8.55□□□□□ -1.04
HERC1-205ENST00000559886 HTN3P15516 51 aa8.55□□□□□ -1.04
HERC1-205ENST00000559886 ZNRF2Q8NHG8 242 aa8.55□□□□□ -1.04
HERC1-205ENST00000559886 LOC100131303A0A0U1RQF7 123 aa8.55□□□□□ -1.04
HERC1-205ENST00000559886 NEGR1Q7Z3B1 354 aa8.55□□□□□ -1.04
HERC1-205ENST00000559886 HIST3H2BBQ8N257 126 aa8.55□□□□□ -1.04
HERC1-205ENST00000559886 STAB2Q8WWQ8 2551 aa8.55□□□□□ -1.04
HERC1-205ENST00000559886 K7EMI3 77 aa8.54□□□□□ -1.04
HERC1-205ENST00000559886 PAX4O43316 350 aa8.54□□□□□ -1.04
HERC1-205ENST00000559886 HSBP1O75506 76 aa8.54□□□□□ -1.04
HERC1-205ENST00000559886 VSIG2Q96IQ7 327 aa8.54□□□□□ -1.04
HERC1-205ENST00000559886 GAGE12JA6NER3 117 aa8.54□□□□□ -1.04
HERC1-205ENST00000559886 I3L3M4 83 aa8.54□□□□□ -1.04
HERC1-205ENST00000559886 UBE2D3P61077 147 aa8.54□□□□□ -1.04
HERC1-205ENST00000559886 UBE2D2P62837 147 aa8.54□□□□□ -1.04
HERC1-205ENST00000559886 GAGE1Q13065 139 aa8.54□□□□□ -1.04
HERC1-205ENST00000559886 GAGE4Q13068 117 aa8.54□□□□□ -1.04
HERC1-205ENST00000559886 GAGE5Q13069 117 aa8.54□□□□□ -1.04
HERC1-205ENST00000559886 GAGE13Q4V321 117 aa8.54□□□□□ -1.04
HERC1-205ENST00000559886 PDZD11Q5EBL8 140 aa8.54□□□□□ -1.04
HERC1-205ENST00000559886 TRAV26-1A0A087WT03 109 aa8.53□□□□□ -1.04
HERC1-205ENST00000559886 TCAPO15273 167 aa8.53□□□□□ -1.04
HERC1-205ENST00000559886 LINC00694P0DN24 101 aa8.53□□□□□ -1.04
HERC1-205ENST00000559886 KIR2DL4Q99706 377 aa8.53□□□□□ -1.04
HERC1-205ENST00000559886 GYPEP15421 78 aa8.53□□□□□ -1.04
HERC1-205ENST00000559886 LAGE3Q14657 143 aa8.53□□□□□ -1.04
HERC1-205ENST00000559886 A0A0J9YY99 117 aa8.52□□□□□ -1.05
HERC1-205ENST00000559886 DAZ4Q86SG3 579 aaKnown RBP8.52□□□□□ -1.05
HERC1-205ENST00000559886 FAM19A2Q8N3H0 131 aa8.52□□□□□ -1.05
HERC1-205ENST00000559886 DAZ3Q9NR90 486 aaKnown RBP8.52□□□□□ -1.05
HERC1-205ENST00000559886 IGHV1-24A0A0C4DH33 117 aa8.52□□□□□ -1.05
HERC1-205ENST00000559886 IFITM10A6NMD0 228 aa8.52□□□□□ -1.05
HERC1-205ENST00000559886 TSHBP01222 138 aa8.52□□□□□ -1.05
HERC1-205ENST00000559886 PMCHL1Q16048 86 aa8.52□□□□□ -1.05
HERC1-205ENST00000559886 PHLDA1Q8WV24 401 aaPredicted RBP8.52□□□□□ -1.05
HERC1-205ENST00000559886 DEFB131BA0A096LNP1 70 aa8.51□□□□□ -1.05
HERC1-205ENST00000559886 S100A2P29034 98 aa8.51□□□□□ -1.05
HERC1-205ENST00000559886 AMTP48728 403 aa8.51□□□□□ -1.05
HERC1-205ENST00000559886 ORMDL2Q53FV1 153 aa8.51□□□□□ -1.05
HERC1-205ENST00000559886 DEFB104AQ8WTQ1 72 aa8.51□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 74.4 ms