RNA–Protein interactions for RNA: ENST00000556564.5

PTPN21-208, Transcript of protein tyrosine phosphatase, non-receptor type 21, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPN21, Length 6,166 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN21-208ENST00000556564 TIRAPP58753 221 aa13.05□□□□□ -0.32
PTPN21-208ENST00000556564 DEFB131BA0A096LNP1 70 aa13.05□□□□□ -0.32
PTPN21-208ENST00000556564 K7EMI3 77 aa13.05□□□□□ -0.32
PTPN21-208ENST00000556564 MED14OSP0DP75 135 aa13.05□□□□□ -0.32
PTPN21-208ENST00000556564 TAL2Q16559 108 aa13.05□□□□□ -0.32
PTPN21-208ENST00000556564 GAGE2BQ13066 116 aa13.04□□□□□ -0.32
PTPN21-208ENST00000556564 TM2D2Q9BX73 214 aa13.04□□□□□ -0.32
PTPN21-208ENST00000556564 BOD1L2Q8IYS8 172 aa13.04□□□□□ -0.32
PTPN21-208ENST00000556564 RNF183Q96D59 192 aa13.04□□□□□ -0.32
PTPN21-208ENST00000556564 IGHV4-4A0A075B6R2 117 aa13.03□□□□□ -0.32
PTPN21-208ENST00000556564 OXLD1Q5BKU9 147 aa13.03□□□□□ -0.32
PTPN21-208ENST00000556564 DEFB105AQ8NG35 78 aa13.03□□□□□ -0.32
PTPN21-208ENST00000556564 PRRC2AP48634 2157 aaKnown RBP13.02□□□□□ -0.32
PTPN21-208ENST00000556564 NOTCH2Q04721 2471 aa13.02□□□□□ -0.33
PTPN21-208ENST00000556564 C9JAW5 83 aa13.01□□□□□ -0.33
PTPN21-208ENST00000556564 PKIGQ9Y2B9 76 aa13.01□□□□□ -0.33
PTPN21-208ENST00000556564 A0A0J9YXV3 536 aa13.01□□□□□ -0.33
PTPN21-208ENST00000556564 CTRLP40313 264 aa13.01□□□□□ -0.33
PTPN21-208ENST00000556564 C21orf62-AS1Q17RA5 79 aa13.01□□□□□ -0.33
PTPN21-208ENST00000556564 ZNF747Q9BV97 191 aa13.01□□□□□ -0.33
PTPN21-208ENST00000556564 TRBV6-1A0A0K0K1D8 114 aa13□□□□□ -0.33
PTPN21-208ENST00000556564 ATG2AQ2TAZ0 1938 aa13□□□□□ -0.33
PTPN21-208ENST00000556564 PIEZO2Q9H5I5 2752 aa13□□□□□ -0.33
PTPN21-208ENST00000556564 LYRM9A8MSI8 78 aa13□□□□□ -0.33
PTPN21-208ENST00000556564 MAJINQ3KP22 176 aa13□□□□□ -0.33
PTPN21-208ENST00000556564 NACAE9PAV3 2078 aa13□□□□□ -0.33
PTPN21-208ENST00000556564 SMIM9A6NGZ8 99 aa13□□□□□ -0.33
PTPN21-208ENST00000556564 HIST1H4AP62805 103 aaKnown RBP13□□□□□ -0.33
PTPN21-208ENST00000556564 GAGE2AQ6NT46 116 aa13□□□□□ -0.33
PTPN21-208ENST00000556564 COX7B2Q8TF08 81 aa13□□□□□ -0.33
PTPN21-208ENST00000556564 TRAV13-2A0A0B4J235 113 aa12.99□□□□□ -0.33
PTPN21-208ENST00000556564 IGLV1-40P01703 118 aa12.99□□□□□ -0.33
PTPN21-208ENST00000556564 ODF3Q96PU9 254 aa12.99□□□□□ -0.33
PTPN21-208ENST00000556564 COX8AP10176 69 aa12.98□□□□□ -0.33
PTPN21-208ENST00000556564 NDUFA7O95182 113 aa12.98□□□□□ -0.33
PTPN21-208ENST00000556564 CEMP1Q6PRD7 247 aaPredicted RBP12.97□□□□□ -0.33
PTPN21-208ENST00000556564 IGHV4-28A0A0C4DH34 117 aa12.96□□□□□ -0.33
PTPN21-208ENST00000556564 CCL25O15444 150 aa12.96□□□□□ -0.33
PTPN21-208ENST00000556564 CSPG4Q6UVK1 2322 aa12.96□□□□□ -0.33
PTPN21-208ENST00000556564 NDUFA1O15239 70 aa12.96□□□□□ -0.33
PTPN21-208ENST00000556564 HERV-K104P63124 156 aa12.96□□□□□ -0.33
PTPN21-208ENST00000556564 LINC00173Q6ZV60 143 aa12.96□□□□□ -0.33
PTPN21-208ENST00000556564 CEND1Q8N111 149 aa12.96□□□□□ -0.33
PTPN21-208ENST00000556564 C19orf71A6NCJ1 209 aa12.96□□□□□ -0.33
PTPN21-208ENST00000556564 MIFP14174 115 aa12.96□□□□□ -0.33
PTPN21-208ENST00000556564 TANC2Q9HCD6 1990 aa12.96□□□□□ -0.33
PTPN21-208ENST00000556564 GAGE12HA6NDE8 117 aa12.96□□□□□ -0.33
PTPN21-208ENST00000556564 PIEZO1Q92508 2521 aa12.96□□□□□ -0.34
PTPN21-208ENST00000556564 ARHGAP32A7KAX9 2087 aa12.95□□□□□ -0.34
PTPN21-208ENST00000556564 LINC00322Q6ZN03 302 aaPredicted RBP12.95□□□□□ -0.34
PTPN21-208ENST00000556564 BAALCQ8WXS3 180 aa12.95□□□□□ -0.34
PTPN21-208ENST00000556564 OPRPNQ99935 248 aaPredicted RBP12.95□□□□□ -0.34
PTPN21-208ENST00000556564 ETDCA0A1B0GVM5 59 aa12.95□□□□□ -0.34
PTPN21-208ENST00000556564 NCR3O14931 201 aa12.95□□□□□ -0.34
PTPN21-208ENST00000556564 CRYGDP07320 174 aa12.95□□□□□ -0.34
PTPN21-208ENST00000556564 ZFAND6Q6FIF0 208 aa12.95□□□□□ -0.34
PTPN21-208ENST00000556564 TOMM6Q96B49 74 aa12.95□□□□□ -0.34
PTPN21-208ENST00000556564 HIGD2BQ4VC39 106 aa12.94□□□□□ -0.34
PTPN21-208ENST00000556564 EDN2P20800 178 aa12.94□□□□□ -0.34
PTPN21-208ENST00000556564 FRMD6-AS1P0C7T7 363 aa12.94□□□□□ -0.34
PTPN21-208ENST00000556564 SPAG11BQ08648 103 aa12.94□□□□□ -0.34
PTPN21-208ENST00000556564 K7ERJ3 54 aa12.93□□□□□ -0.34
PTPN21-208ENST00000556564 LINC00269Q8N2A0 174 aa12.93□□□□□ -0.34
PTPN21-208ENST00000556564 C15orf53Q8NAA6 179 aa12.93□□□□□ -0.34
PTPN21-208ENST00000556564 TRBV10-1A0A0K0K1A3 114 aa12.92□□□□□ -0.34
PTPN21-208ENST00000556564 DAND5Q8N907 189 aa12.92□□□□□ -0.34
PTPN21-208ENST00000556564 PRO1854Q9UHT4 67 aa12.92□□□□□ -0.34
PTPN21-208ENST00000556564 RPL32P62910 135 aaKnown RBP12.91□□□□□ -0.34
PTPN21-208ENST00000556564 PCP2Q8IVA1 136 aa12.91□□□□□ -0.34
PTPN21-208ENST00000556564 IGLC3P0DOY3 106 aa12.91□□□□□ -0.34
PTPN21-208ENST00000556564 CACNA1AO00555 2505 aa12.9□□□□□ -0.34
PTPN21-208ENST00000556564 IGLV2-18A0A075B6J9 118 aa12.9□□□□□ -0.34
PTPN21-208ENST00000556564 Q6ZUT4 128 aa12.9□□□□□ -0.34
PTPN21-208ENST00000556564 MTURNQ8N3F0 131 aa12.9□□□□□ -0.34
PTPN21-208ENST00000556564 PRM2P04554 102 aa12.9□□□□□ -0.34
PTPN21-208ENST00000556564 GTSF1LQ9H1H1 148 aa12.9□□□□□ -0.34
PTPN21-208ENST00000556564 EXPH5Q8NEV8 1989 aa12.9□□□□□ -0.34
PTPN21-208ENST00000556564 M0R2N4 97 aa12.9□□□□□ -0.34
PTPN21-208ENST00000556564 UBE2AP49459 152 aa12.89□□□□□ -0.35
PTPN21-208ENST00000556564 TRAV10A0A0B4J240 114 aa12.89□□□□□ -0.35
PTPN21-208ENST00000556564 SOCS3O14543 225 aa12.89□□□□□ -0.35
PTPN21-208ENST00000556564 NUPR1O60356 82 aa12.89□□□□□ -0.35
PTPN21-208ENST00000556564 PROK1P58294 105 aa12.89□□□□□ -0.35
PTPN21-208ENST00000556564 REG3AQ06141 175 aa12.89□□□□□ -0.35
PTPN21-208ENST00000556564 IGKV2-24A0A0C4DH68 120 aa12.89□□□□□ -0.35
PTPN21-208ENST00000556564 IGLV2-8P01709 118 aa12.89□□□□□ -0.35
PTPN21-208ENST00000556564 CFAP126Q5VTH2 177 aa12.89□□□□□ -0.35
PTPN21-208ENST00000556564 IGHV4-30-4P0DP06 118 aa12.88□□□□□ -0.35
PTPN21-208ENST00000556564 PRSS47A8MTI9 375 aa12.88□□□□□ -0.35
PTPN21-208ENST00000556564 TNRC6BQ9UPQ9 1833 aaKnown RBP12.88□□□□□ -0.35
PTPN21-208ENST00000556564 A0A0J9YWU9 116 aa12.88□□□□□ -0.35
PTPN21-208ENST00000556564 DSCR8Q96T75 97 aa12.87□□□□□ -0.35
PTPN21-208ENST00000556564 OCIAD2Q56VL3 154 aa12.87□□□□□ -0.35
PTPN21-208ENST00000556564 SND1-IT1Q9HBX3 110 aa12.87□□□□□ -0.35
PTPN21-208ENST00000556564 HIVEP3Q5T1R4 2406 aa12.87□□□□□ -0.35
PTPN21-208ENST00000556564 LY6G6CO95867 125 aa12.86□□□□□ -0.35
PTPN21-208ENST00000556564 ZFAND2AQ8N6M9 145 aa12.86□□□□□ -0.35
PTPN21-208ENST00000556564 NEXN-AS1Q8NBZ9 246 aa12.86□□□□□ -0.35
PTPN21-208ENST00000556564 C20orf203Q8NBC4 194 aa12.86□□□□□ -0.35
PTPN21-208ENST00000556564 BVES-AS1Q5T3Y7 98 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 57.2 ms