RNA–Protein interactions for RNA: ENST00000556432.1

ACTN1-219, Transcript of actinin alpha 1, humanhuman

TSL 1 (best)

Gene ACTN1, Length 558 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-219ENST00000556432 SH2D1AO60880 128 aa8.74□□□□□ -1.01
ACTN1-219ENST00000556432 RAB5CP51148 216 aa8.74□□□□□ -1.01
ACTN1-219ENST00000556432 KRTAP10-8P60410 259 aa8.74□□□□□ -1.01
ACTN1-219ENST00000556432 REG3AQ06141 175 aa8.74□□□□□ -1.01
ACTN1-219ENST00000556432 DNLZQ5SXM8 178 aa8.74□□□□□ -1.01
ACTN1-219ENST00000556432 KRTAP9-2Q9BYQ4 174 aa8.74□□□□□ -1.01
ACTN1-219ENST00000556432 TRBV25-1A0A075B6N4 114 aa8.73□□□□□ -1.01
ACTN1-219ENST00000556432 SLPIP03973 132 aa8.73□□□□□ -1.01
ACTN1-219ENST00000556432 STAG3L2P0CL84 134 aa8.73□□□□□ -1.01
ACTN1-219ENST00000556432 STAG3L3P0CL85 134 aa8.73□□□□□ -1.01
ACTN1-219ENST00000556432 RAB4BP61018 213 aa8.73□□□□□ -1.01
ACTN1-219ENST00000556432 COX6A2Q02221 97 aa8.73□□□□□ -1.01
ACTN1-219ENST00000556432 TMEM97Q5BJF2 176 aa8.73□□□□□ -1.01
ACTN1-219ENST00000556432 FAM162BQ5T6X4 162 aa8.73□□□□□ -1.01
ACTN1-219ENST00000556432 RPL7L1Q6DKI1 246 aaKnown RBP8.73□□□□□ -1.01
ACTN1-219ENST00000556432 Q6ZNX1 250 aa8.73□□□□□ -1.01
ACTN1-219ENST00000556432 Q86TA4 180 aa8.73□□□□□ -1.01
ACTN1-219ENST00000556432 INO80EQ8NBZ0 244 aaPredicted RBP8.73□□□□□ -1.01
ACTN1-219ENST00000556432 RAB24Q969Q5 203 aa8.73□□□□□ -1.01
ACTN1-219ENST00000556432 DERL1Q9BUN8 251 aa8.73□□□□□ -1.01
ACTN1-219ENST00000556432 TMEM167BQ9NRX6 74 aa8.73□□□□□ -1.01
ACTN1-219ENST00000556432 F5H697 171 aa8.72□□□□□ -1.01
ACTN1-219ENST00000556432 SPINK6Q6UWN8 80 aa8.72□□□□□ -1.01
ACTN1-219ENST00000556432 NTM-AS1Q6ZSK4 140 aa8.72□□□□□ -1.01
ACTN1-219ENST00000556432 STPG4Q8N801 248 aa8.72□□□□□ -1.01
ACTN1-219ENST00000556432 CXorf1O96002 111 aa8.71□□□□□ -1.02
ACTN1-219ENST00000556432 ATP6V0CP27449 155 aa8.71□□□□□ -1.02
ACTN1-219ENST00000556432 SUN5Q8TC36 379 aa8.71□□□□□ -1.02
ACTN1-219ENST00000556432 TRAV8-4A0A0B4J246 113 aa8.7□□□□□ -1.02
ACTN1-219ENST00000556432 MUC21A0A0G2JKD1 596 aa8.7□□□□□ -1.02
ACTN1-219ENST00000556432 TRBV6-1A0A0K0K1D8 114 aa8.7□□□□□ -1.02
ACTN1-219ENST00000556432 PEX7O00628 323 aa8.7□□□□□ -1.02
ACTN1-219ENST00000556432 NDUFS6O75380 124 aaKnown RBP8.7□□□□□ -1.02
ACTN1-219ENST00000556432 P01737 135 aa8.7□□□□□ -1.02
ACTN1-219ENST00000556432 CRIP1P50238 77 aa8.7□□□□□ -1.02
ACTN1-219ENST00000556432 IGHV1-24A0A0C4DH33 117 aa8.69□□□□□ -1.02
ACTN1-219ENST00000556432 A0A1B0GVG6 124 aa8.69□□□□□ -1.02
ACTN1-219ENST00000556432 UBE2G2P60604 165 aa8.69□□□□□ -1.02
ACTN1-219ENST00000556432 PRR27Q6MZM9 219 aa8.69□□□□□ -1.02
ACTN1-219ENST00000556432 PRSS3P2Q8NHM4 247 aa8.69□□□□□ -1.02
ACTN1-219ENST00000556432 CYTL1Q9NRR1 136 aa8.69□□□□□ -1.02
ACTN1-219ENST00000556432 A0A1W2PRE2 83 aa8.68□□□□□ -1.02
ACTN1-219ENST00000556432 RPS10P46783 165 aaKnown RBP8.68□□□□□ -1.02
ACTN1-219ENST00000556432 LINC01559Q495D7 138 aa8.68□□□□□ -1.02
ACTN1-219ENST00000556432 HIGD2BQ4VC39 106 aa8.68□□□□□ -1.02
ACTN1-219ENST00000556432 PSMG3Q9BT73 122 aaPredicted RBP8.68□□□□□ -1.02
ACTN1-219ENST00000556432 BORCS7-ASMTA0A0B4J1R7 106 aa8.67□□□□□ -1.02
ACTN1-219ENST00000556432 MBP02144 154 aa8.67□□□□□ -1.02
ACTN1-219ENST00000556432 LPAP08519 4548 aa8.67□□□□□ -1.02
ACTN1-219ENST00000556432 GZMBP10144 247 aa8.67□□□□□ -1.02
ACTN1-219ENST00000556432 SULT1A2P50226 295 aa8.67□□□□□ -1.02
ACTN1-219ENST00000556432 SSTP61278 116 aa8.67□□□□□ -1.02
ACTN1-219ENST00000556432 UBE2G1P62253 170 aa8.67□□□□□ -1.02
ACTN1-219ENST00000556432 CFAP161Q6P656 301 aa8.67□□□□□ -1.02
ACTN1-219ENST00000556432 OR10AG1Q8NH19 301 aa8.67□□□□□ -1.02
ACTN1-219ENST00000556432 ZNF471Q9BX82 626 aaPredicted RBP8.67□□□□□ -1.02
ACTN1-219ENST00000556432 ACTR3CQ9C0K3 210 aaPredicted RBP8.67□□□□□ -1.02
ACTN1-219ENST00000556432 VAX2Q9UIW0 290 aa8.67□□□□□ -1.02
ACTN1-219ENST00000556432 ZFP30Q9Y2G7 519 aa8.67□□□□□ -1.02
ACTN1-219ENST00000556432 MUC21A0A140T8X8 626 aa8.66□□□□□ -1.02
ACTN1-219ENST00000556432 H7C1H1 209 aa8.66□□□□□ -1.02
ACTN1-219ENST00000556432 IQCJQ1A5X6 159 aa8.66□□□□□ -1.02
ACTN1-219ENST00000556432 KCNRGQ8N5I3 272 aa8.66□□□□□ -1.02
ACTN1-219ENST00000556432 C20orf203Q8NBC4 194 aa8.66□□□□□ -1.02
ACTN1-219ENST00000556432 IGLV4-60A0A075B6I1 120 aa8.65□□□□□ -1.02
ACTN1-219ENST00000556432 A0A0U1RQV1 116 aa8.65□□□□□ -1.02
ACTN1-219ENST00000556432 SMIM17P0DL12 118 aa8.65□□□□□ -1.02
ACTN1-219ENST00000556432 ZNF345Q14585 488 aa8.65□□□□□ -1.02
ACTN1-219ENST00000556432 ZNF726P1Q15940 193 aa8.65□□□□□ -1.02
ACTN1-219ENST00000556432 ZNF674Q2M3X9 581 aa8.65□□□□□ -1.02
ACTN1-219ENST00000556432 SPANXN1Q5VSR9 72 aa8.65□□□□□ -1.02
ACTN1-219ENST00000556432 Q6ZRP5 223 aa8.65□□□□□ -1.02
ACTN1-219ENST00000556432 TCTE3Q8IZS6 198 aa8.65□□□□□ -1.02
ACTN1-219ENST00000556432 C15orf56Q8N910 161 aa8.65□□□□□ -1.02
ACTN1-219ENST00000556432 HIST1H2BAQ96A08 127 aa8.65□□□□□ -1.02
ACTN1-219ENST00000556432 TMEM243Q9BU79 118 aa8.65□□□□□ -1.02
ACTN1-219ENST00000556432 GFRA4Q9GZZ7 299 aa8.65□□□□□ -1.02
ACTN1-219ENST00000556432 A0A096LNI7 61 aa8.64□□□□□ -1.03
ACTN1-219ENST00000556432 IGKV3OR2-268A0A0C4DH90 116 aa8.64□□□□□ -1.03
ACTN1-219ENST00000556432 FAM231BA6NCW3 169 aa8.64□□□□□ -1.03
ACTN1-219ENST00000556432 GAGE12HA6NDE8 117 aa8.64□□□□□ -1.03
ACTN1-219ENST00000556432 HMSDA8MTL9 139 aa8.64□□□□□ -1.03
ACTN1-219ENST00000556432 BCL2L11O43521 198 aa8.64□□□□□ -1.03
ACTN1-219ENST00000556432 FMC1Q96HJ9 113 aa8.64□□□□□ -1.03
ACTN1-219ENST00000556432 UBE2L6O14933 153 aa8.63□□□□□ -1.03
ACTN1-219ENST00000556432 SRSF9Q13242 221 aaKnown RBP eCLIP8.63□□□□□ -1.03
ACTN1-219ENST00000556432 COX8CQ7Z4L0 72 aa8.63□□□□□ -1.03
ACTN1-219ENST00000556432 AKAP14Q86UN6 197 aa8.63□□□□□ -1.03
ACTN1-219ENST00000556432 LINC00474Q9P2X8 69 aa8.63□□□□□ -1.03
ACTN1-219ENST00000556432 MGPP08493 103 aa8.62□□□□□ -1.03
ACTN1-219ENST00000556432 SERF2P84101 59 aa8.62□□□□□ -1.03
ACTN1-219ENST00000556432 AKR1C8PQ5T2L2 129 aa8.62□□□□□ -1.03
ACTN1-219ENST00000556432 TMUB2Q71RG4 321 aa8.62□□□□□ -1.03
ACTN1-219ENST00000556432 NKX6-2Q9C056 277 aaPredicted RBP8.62□□□□□ -1.03
ACTN1-219ENST00000556432 KRTAP9-6A0A140TA67 174 aa8.61□□□□□ -1.03
ACTN1-219ENST00000556432 A0A1B0GUV1 79 aa8.61□□□□□ -1.03
ACTN1-219ENST00000556432 KANTRA0A1W2PQU2 76 aa8.61□□□□□ -1.03
ACTN1-219ENST00000556432 FAM74A7A6NL05 159 aa8.61□□□□□ -1.03
ACTN1-219ENST00000556432 PFDN1O60925 122 aa8.61□□□□□ -1.03
ACTN1-219ENST00000556432 FHITP49789 147 aa8.61□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 170.4 ms