RNA–Protein interactions for RNA: ENST00000555609.5

TUBB3-209, Transcript of tubulin beta 3 class III, humanhuman

TSL 3

Gene TUBB3, Length 1,855 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-209ENST00000555609 LGALS3P17931 250 aaKnown RBP11.97□□□□□ -0.49
TUBB3-209ENST00000555609 FAM74A4Q5TZK3 123 aa11.97□□□□□ -0.49
TUBB3-209ENST00000555609 NDUFA11Q86Y39 141 aa11.97□□□□□ -0.49
TUBB3-209ENST00000555609 ZNRF2Q8NHG8 242 aa11.97□□□□□ -0.49
TUBB3-209ENST00000555609 UBE2E2Q96LR5 201 aa11.97□□□□□ -0.49
TUBB3-209ENST00000555609 SPATA25Q9BR10 227 aa11.97□□□□□ -0.49
TUBB3-209ENST00000555609 TSPAN13O95857 204 aa11.96□□□□□ -0.49
TUBB3-209ENST00000555609 TMEM95Q3KNT9 176 aa11.96□□□□□ -0.49
TUBB3-209ENST00000555609 HIST2H2BCQ6DN03 193 aa11.96□□□□□ -0.49
TUBB3-209ENST00000555609 AMTNQ6UX39 209 aa11.96□□□□□ -0.49
TUBB3-209ENST00000555609 FLNBO75369 2602 aaKnown RBP11.96□□□□□ -0.49
TUBB3-209ENST00000555609 TRAV2A0A0B4J234 112 aa11.95□□□□□ -0.5
TUBB3-209ENST00000555609 TMEM223A0PJW6 202 aa11.95□□□□□ -0.5
TUBB3-209ENST00000555609 GAGE12HA6NDE8 117 aa11.95□□□□□ -0.5
TUBB3-209ENST00000555609 ETDBQ3ZM63 59 aa11.95□□□□□ -0.5
TUBB3-209ENST00000555609 WFDC12Q8WWY7 111 aa11.95□□□□□ -0.5
TUBB3-209ENST00000555609 PTH2Q96A98 100 aa11.95□□□□□ -0.5
TUBB3-209ENST00000555609 PYGO1Q9Y3Y4 419 aa11.95□□□□□ -0.5
TUBB3-209ENST00000555609 A8MTW9 85 aa11.95□□□□□ -0.5
TUBB3-209ENST00000555609 CFAP126Q5VTH2 177 aa11.95□□□□□ -0.5
TUBB3-209ENST00000555609 MTURNQ8N3F0 131 aa11.95□□□□□ -0.5
TUBB3-209ENST00000555609 AMELXQ99217 191 aa11.95□□□□□ -0.5
TUBB3-209ENST00000555609 SPAG8Q99932 426 aaPredicted RBP11.95□□□□□ -0.5
TUBB3-209ENST00000555609 TRAV12-2A0A075B6T6 113 aa11.94□□□□□ -0.5
TUBB3-209ENST00000555609 SPINK13Q1W4C9 94 aa11.94□□□□□ -0.5
TUBB3-209ENST00000555609 VPREB3Q9UKI3 123 aa11.94□□□□□ -0.5
TUBB3-209ENST00000555609 P0DMU3 169 aa11.93□□□□□ -0.5
TUBB3-209ENST00000555609 FAM231AP0DMU4 169 aa11.93□□□□□ -0.5
TUBB3-209ENST00000555609 FAM231CP0DMU5 169 aa11.93□□□□□ -0.5
TUBB3-209ENST00000555609 SYNJ2BPP57105 145 aa11.93□□□□□ -0.5
TUBB3-209ENST00000555609 VCX2Q9H322 139 aa11.93□□□□□ -0.5
TUBB3-209ENST00000555609 EMP1P54849 157 aa11.93□□□□□ -0.5
TUBB3-209ENST00000555609 TSPEAR-AS2P59090 65 aa11.93□□□□□ -0.5
TUBB3-209ENST00000555609 SH2D6Q7Z4S9 175 aa11.93□□□□□ -0.5
TUBB3-209ENST00000555609 C10orf126Q8N4M7 172 aa11.93□□□□□ -0.5
TUBB3-209ENST00000555609 C1QTNF4Q9BXJ3 329 aa11.93□□□□□ -0.5
TUBB3-209ENST00000555609 TSSC4Q9Y5U2 329 aaPredicted RBP11.93□□□□□ -0.5
TUBB3-209ENST00000555609 IGKV3-20P01619 116 aa11.92□□□□□ -0.5
TUBB3-209ENST00000555609 Q5PR19 223 aa11.92□□□□□ -0.5
TUBB3-209ENST00000555609 A0A096LNT2 108 aa11.91□□□□□ -0.5
TUBB3-209ENST00000555609 RHODO00212 210 aa11.91□□□□□ -0.5
TUBB3-209ENST00000555609 APOMO95445 188 aa11.91□□□□□ -0.5
TUBB3-209ENST00000555609 CFC1BP0CG36 223 aa11.91□□□□□ -0.5
TUBB3-209ENST00000555609 CFC1P0CG37 223 aa11.91□□□□□ -0.5
TUBB3-209ENST00000555609 HOXD3P31249 432 aaPredicted RBP11.91□□□□□ -0.5
TUBB3-209ENST00000555609 PRO1854Q9UHT4 67 aa11.91□□□□□ -0.5
TUBB3-209ENST00000555609 CSMD1Q96PZ7 3565 aa11.91□□□□□ -0.5
TUBB3-209ENST00000555609 SETXQ7Z333 2677 aaKnown RBP11.91□□□□□ -0.5
TUBB3-209ENST00000555609 ASH1LQ9NR48 2969 aaKnown RBP11.91□□□□□ -0.5
TUBB3-209ENST00000555609 IGLV4-3A0A075B6K6 122 aa11.91□□□□□ -0.5
TUBB3-209ENST00000555609 LOC107984156A0A0G2JMH3 177 aa11.91□□□□□ -0.5
TUBB3-209ENST00000555609 A8MWV9 139 aa11.91□□□□□ -0.5
TUBB3-209ENST00000555609 FSHBP01225 129 aa11.91□□□□□ -0.5
TUBB3-209ENST00000555609 PSMB2P49721 201 aa11.91□□□□□ -0.5
TUBB3-209ENST00000555609 Q6YL49 198 aa11.91□□□□□ -0.5
TUBB3-209ENST00000555609 SBSPONQ8IVN8 264 aa11.91□□□□□ -0.5
TUBB3-209ENST00000555609 ARL17AQ8IVW1 177 aa11.91□□□□□ -0.5
TUBB3-209ENST00000555609 CELSR2Q9HCU4 2923 aa11.91□□□□□ -0.5
TUBB3-209ENST00000555609 M0QXV9 152 aa11.9□□□□□ -0.5
TUBB3-209ENST00000555609 ZNF22P17026 224 aaPredicted RBP11.9□□□□□ -0.5
TUBB3-209ENST00000555609 FOXI1Q12951 378 aa11.9□□□□□ -0.5
TUBB3-209ENST00000555609 C10orf99Q6UWK7 81 aa11.9□□□□□ -0.5
TUBB3-209ENST00000555609 ZNF702PQ9H963 129 aa11.9□□□□□ -0.5
TUBB3-209ENST00000555609 A0A0B4J2C4 111 aa11.89□□□□□ -0.51
TUBB3-209ENST00000555609 AZU1P20160 251 aa11.89□□□□□ -0.51
TUBB3-209ENST00000555609 LINC00467Q9BRT7 94 aa11.89□□□□□ -0.51
TUBB3-209ENST00000555609 TRAV16A0A0A6YYK6 109 aaPredicted RBP11.89□□□□□ -0.51
TUBB3-209ENST00000555609 TCTEX1D4Q5JR98 221 aa11.89□□□□□ -0.51
TUBB3-209ENST00000555609 M0R2P5 195 aa11.87□□□□□ -0.51
TUBB3-209ENST00000555609 TGFAP01135 160 aa11.87□□□□□ -0.51
TUBB3-209ENST00000555609 SMCPP49901 116 aaPredicted RBP11.87□□□□□ -0.51
TUBB3-209ENST00000555609 MRPS36P82909 103 aaKnown RBP11.87□□□□□ -0.51
TUBB3-209ENST00000555609 DNAJC30Q96LL9 226 aa11.87□□□□□ -0.51
TUBB3-209ENST00000555609 PEMTQ9UBM1 199 aa11.87□□□□□ -0.51
TUBB3-209ENST00000555609 TNFRSF18Q9Y5U5 241 aa11.87□□□□□ -0.51
TUBB3-209ENST00000555609 H3BMM0 161 aa11.86□□□□□ -0.51
TUBB3-209ENST00000555609 ZNF415Q09FC8 603 aa11.86□□□□□ -0.51
TUBB3-209ENST00000555609 Q8N2B8 174 aa11.86□□□□□ -0.51
TUBB3-209ENST00000555609 PPDPFLQ8WWR9 84 aa11.86□□□□□ -0.51
TUBB3-209ENST00000555609 DUX5Q96PT3 197 aa11.86□□□□□ -0.51
TUBB3-209ENST00000555609 GTSF1LQ9H1H1 148 aa11.86□□□□□ -0.51
TUBB3-209ENST00000555609 SPANXA1Q9NS26 97 aa11.86□□□□□ -0.51
TUBB3-209ENST00000555609 ABCA12Q86UK0 2595 aa11.86□□□□□ -0.51
TUBB3-209ENST00000555609 TEN1Q86WV5 123 aa11.85□□□□□ -0.51
TUBB3-209ENST00000555609 OPRPNQ99935 248 aaPredicted RBP11.85□□□□□ -0.51
TUBB3-209ENST00000555609 AKAP6Q13023 2319 aa11.85□□□□□ -0.51
TUBB3-209ENST00000555609 UNC79Q9P2D8 2635 aa11.85□□□□□ -0.51
TUBB3-209ENST00000555609 A0A0J9YXV3 536 aa11.85□□□□□ -0.51
TUBB3-209ENST00000555609 TCL1BO95988 128 aa11.85□□□□□ -0.51
TUBB3-209ENST00000555609 DEFB104AQ8WTQ1 72 aa11.85□□□□□ -0.51
TUBB3-209ENST00000555609 TMEM263Q8WUH6 116 aaKnown RBP11.85□□□□□ -0.51
TUBB3-209ENST00000555609 SPXQ9BT56 116 aa11.85□□□□□ -0.51
TUBB3-209ENST00000555609 CSMD2Q7Z408 3487 aa11.84□□□□□ -0.51
TUBB3-209ENST00000555609 A4D1N5 150 aa11.84□□□□□ -0.51
TUBB3-209ENST00000555609 IGHV3-33P01772 117 aa11.84□□□□□ -0.51
TUBB3-209ENST00000555609 SCGB1C2P0DMR2 95 aa11.84□□□□□ -0.51
TUBB3-209ENST00000555609 CD28P10747 220 aa11.84□□□□□ -0.51
TUBB3-209ENST00000555609 DEFB131AP59861 70 aa11.84□□□□□ -0.51
TUBB3-209ENST00000555609 ERG28Q9UKR5 140 aa11.84□□□□□ -0.51
TUBB3-209ENST00000555609 TINCRA0A1B0GVN0 87 aa11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 81.2 ms