RNA–Protein interactions for RNA: ENST00000554819.5

SCFD1-214, Transcript of sec1 family domain containing 1, humanhuman

TSL 5

Gene SCFD1, Length 608 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-214ENST00000554819 PLCE1Q9P212 2302 aa-0.14□□□□□ -2.43
SCFD1-214ENST00000554819 ANKRD31Q8N7Z5 1873 aa-0.14□□□□□ -2.43
SCFD1-214ENST00000554819 PKDREJQ9NTG1 2253 aa-0.15□□□□□ -2.43
SCFD1-214ENST00000554819 DNAH17Q9UFH2 4485 aa-0.15□□□□□ -2.43
SCFD1-214ENST00000554819 MED23Q9ULK4 1368 aa-0.15□□□□□ -2.43
SCFD1-214ENST00000554819 ALKQ9UM73 1620 aa-0.15□□□□□ -2.43
SCFD1-214ENST00000554819 IGHV1-24A0A0C4DH33 117 aa-0.15□□□□□ -2.43
SCFD1-214ENST00000554819 TEX49A0A1B0GTD5 131 aa-0.15□□□□□ -2.43
SCFD1-214ENST00000554819 UQCRQO14949 82 aa-0.15□□□□□ -2.43
SCFD1-214ENST00000554819 OR2H2O95918 312 aa-0.15□□□□□ -2.43
SCFD1-214ENST00000554819 SLC25A5P05141 298 aaKnown RBP-0.15□□□□□ -2.43
SCFD1-214ENST00000554819 ADCYAP1P18509 176 aa-0.15□□□□□ -2.43
SCFD1-214ENST00000554819 SDC4P31431 198 aa-0.15□□□□□ -2.43
SCFD1-214ENST00000554819 CKS2P33552 79 aa-0.15□□□□□ -2.43
SCFD1-214ENST00000554819 PPP1R2P3Q6NXS1 205 aa-0.15□□□□□ -2.43
SCFD1-214ENST00000554819 OR9Q1Q8NGQ5 310 aa-0.15□□□□□ -2.43
SCFD1-214ENST00000554819 BRK1Q8WUW1 75 aa-0.15□□□□□ -2.43
SCFD1-214ENST00000554819 CCDC115Q96NT0 180 aa-0.15□□□□□ -2.43
SCFD1-214ENST00000554819 DSCR8Q96T75 97 aa-0.15□□□□□ -2.43
SCFD1-214ENST00000554819 RREB1Q92766 1687 aa-0.15□□□□□ -2.43
SCFD1-214ENST00000554819 VPS13DQ5THJ4 4388 aa-0.15□□□□□ -2.43
SCFD1-214ENST00000554819 DNAH11Q96DT5 4516 aa-0.15□□□□□ -2.43
SCFD1-214ENST00000554819 TJP1Q07157 1748 aa-0.16□□□□□ -2.43
SCFD1-214ENST00000554819 DNAH8Q96JB1 4490 aa-0.16□□□□□ -2.43
SCFD1-214ENST00000554819 NHSL1Q5SYE7 1610 aa-0.16□□□□□ -2.43
SCFD1-214ENST00000554819 PPRC1Q5VV67 1664 aaKnown RBP-0.16□□□□□ -2.44
SCFD1-214ENST00000554819 LCE6AA0A183 80 aa-0.16□□□□□ -2.44
SCFD1-214ENST00000554819 PNMA8CA0A1B0GUJ8 204 aa-0.16□□□□□ -2.44
SCFD1-214ENST00000554819 M0QZK8 103 aa-0.16□□□□□ -2.44
SCFD1-214ENST00000554819 IFNA21P01568 189 aa-0.16□□□□□ -2.44
SCFD1-214ENST00000554819 PYYP10082 97 aa-0.16□□□□□ -2.44
SCFD1-214ENST00000554819 IQCJQ1A5X6 159 aa-0.16□□□□□ -2.44
SCFD1-214ENST00000554819 UNQ5815/PRO19632Q6UWF5 114 aa-0.16□□□□□ -2.44
SCFD1-214ENST00000554819 PPDPFLQ8WWR9 84 aa-0.16□□□□□ -2.44
SCFD1-214ENST00000554819 PRR15LQ9BU68 103 aa-0.16□□□□□ -2.44
SCFD1-214ENST00000554819 CENPHQ9H3R5 247 aa-0.16□□□□□ -2.44
SCFD1-214ENST00000554819 METTL1Q9UBP6 276 aaKnown RBP-0.16□□□□□ -2.44
SCFD1-214ENST00000554819 MED13LQ71F56 2210 aa-0.16□□□□□ -2.44
SCFD1-214ENST00000554819 ZNF609O15014 1411 aa-0.16□□□□□ -2.44
SCFD1-214ENST00000554819 SOGA1O94964 1423 aa-0.16□□□□□ -2.44
SCFD1-214ENST00000554819 UNC13BO14795 1591 aa-0.16□□□□□ -2.44
SCFD1-214ENST00000554819 BICRAQ9NZM4 1560 aa-0.16□□□□□ -2.44
SCFD1-214ENST00000554819 ABCA1O95477 2261 aa-0.16□□□□□ -2.44
SCFD1-214ENST00000554819 DMDP11532 3685 aa-0.16□□□□□ -2.44
SCFD1-214ENST00000554819 LAMC1P11047 1609 aa-0.16□□□□□ -2.44
SCFD1-214ENST00000554819 CACNA1CQ13936 2221 aa-0.17□□□□□ -2.44
SCFD1-214ENST00000554819 DNAH2Q9P225 4427 aa-0.17□□□□□ -2.44
SCFD1-214ENST00000554819 CDK13Q14004 1512 aaKnown RBP-0.17□□□□□ -2.44
SCFD1-214ENST00000554819 ASXL1Q8IXJ9 1541 aa-0.17□□□□□ -2.44
SCFD1-214ENST00000554819 COL4A6Q14031 1691 aa-0.17□□□□□ -2.44
SCFD1-214ENST00000554819 TRAV12-2A0A075B6T6 113 aa-0.17□□□□□ -2.44
SCFD1-214ENST00000554819 CXorf51AA0A1B0GTR3 108 aa-0.17□□□□□ -2.44
SCFD1-214ENST00000554819 A0A1B0GV72 72 aa-0.17□□□□□ -2.44
SCFD1-214ENST00000554819 C9JAW5 83 aa-0.17□□□□□ -2.44
SCFD1-214ENST00000554819 ANK1P16157 1881 aa-0.17□□□□□ -2.44
SCFD1-214ENST00000554819 POLR2JP52435 117 aaKnown RBP-0.17□□□□□ -2.44
SCFD1-214ENST00000554819 TFAMQ00059 246 aaKnown RBP-0.17□□□□□ -2.44
SCFD1-214ENST00000554819 EMX2Q04743 252 aa-0.17□□□□□ -2.44
SCFD1-214ENST00000554819 SPCS2Q15005 226 aa-0.17□□□□□ -2.44
SCFD1-214ENST00000554819 ARHGAP31Q2M1Z3 1444 aa-0.17□□□□□ -2.44
SCFD1-214ENST00000554819 HSD17B12Q53GQ0 312 aa-0.17□□□□□ -2.44
SCFD1-214ENST00000554819 TMEM128Q5BJH2 165 aa-0.17□□□□□ -2.44
SCFD1-214ENST00000554819 COA4Q9NYJ1 87 aa-0.17□□□□□ -2.44
SCFD1-214ENST00000554819 LRP6O75581 1613 aa-0.17□□□□□ -2.44
SCFD1-214ENST00000554819 PAPPAQ13219 1627 aa-0.17□□□□□ -2.44
SCFD1-214ENST00000554819 MAGI2Q86UL8 1455 aa-0.17□□□□□ -2.44
SCFD1-214ENST00000554819 MRC2Q9UBG0 1479 aa-0.17□□□□□ -2.44
SCFD1-214ENST00000554819 AHCTF1Q8WYP5 2266 aa-0.17□□□□□ -2.44
SCFD1-214ENST00000554819 RIMS1Q86UR5 1692 aaKnown RBP-0.18□□□□□ -2.44
SCFD1-214ENST00000554819 KIDINS220Q9ULH0 1771 aa-0.18□□□□□ -2.44
SCFD1-214ENST00000554819 DLEC1Q9Y238 1755 aa-0.18□□□□□ -2.44
SCFD1-214ENST00000554819 TRAV2A0A0B4J234 112 aa-0.18□□□□□ -2.44
SCFD1-214ENST00000554819 TCRAP04437 139 aa-0.18□□□□□ -2.44
SCFD1-214ENST00000554819 ELOF1P60002 83 aaKnown RBP-0.18□□□□□ -2.44
SCFD1-214ENST00000554819 PCBD1P61457 104 aa-0.18□□□□□ -2.44
SCFD1-214ENST00000554819 RPS28P62857 69 aaKnown RBP-0.18□□□□□ -2.44
SCFD1-214ENST00000554819 PLGLB1Q02325 96 aa-0.18□□□□□ -2.44
SCFD1-214ENST00000554819 SAMD13Q5VXD3 122 aa-0.18□□□□□ -2.44
SCFD1-214ENST00000554819 KRTAP8-1Q8IUC2 63 aa-0.18□□□□□ -2.44
SCFD1-214ENST00000554819 DEFB123Q8N688 67 aa-0.18□□□□□ -2.44
SCFD1-214ENST00000554819 PPP1R1CQ8WVI7 109 aa-0.18□□□□□ -2.44
SCFD1-214ENST00000554819 TMEM141Q96I45 108 aa-0.18□□□□□ -2.44
SCFD1-214ENST00000554819 VPS25Q9BRG1 176 aa-0.18□□□□□ -2.44
SCFD1-214ENST00000554819 DDA1Q9BW61 102 aa-0.18□□□□□ -2.44
SCFD1-214ENST00000554819 BET1LQ9NYM9 111 aa-0.18□□□□□ -2.44
SCFD1-214ENST00000554819 NDUFAF1Q9Y375 327 aa-0.18□□□□□ -2.44
SCFD1-214ENST00000554819 ZMYM4Q5VZL5 1548 aa-0.18□□□□□ -2.44
SCFD1-214ENST00000554819 MYH2Q9UKX2 1941 aa-0.19□□□□□ -2.44
SCFD1-214ENST00000554819 AKAP6Q13023 2319 aa-0.19□□□□□ -2.44
SCFD1-214ENST00000554819 LAMB1P07942 1786 aa-0.19□□□□□ -2.44
SCFD1-214ENST00000554819 OVOS2A0A0G2JMS6 1433 aa-0.19□□□□□ -2.44
SCFD1-214ENST00000554819 M0R2T5 61 aa-0.19□□□□□ -2.44
SCFD1-214ENST00000554819 APOC1P02654 83 aa-0.19□□□□□ -2.44
SCFD1-214ENST00000554819 FABP1P07148 127 aa-0.19□□□□□ -2.44
SCFD1-214ENST00000554819 HIST1H1BP16401 226 aaKnown RBP-0.19□□□□□ -2.44
SCFD1-214ENST00000554819 AKR1D1P51857 326 aa-0.19□□□□□ -2.44
SCFD1-214ENST00000554819 PSPHP78330 225 aa-0.19□□□□□ -2.44
SCFD1-214ENST00000554819 TMEM91Q6ZNR0 172 aa-0.19□□□□□ -2.44
SCFD1-214ENST00000554819 SLC25A26Q70HW3 274 aa-0.19□□□□□ -2.44
SCFD1-214ENST00000554819 BPESC1Q9GZL8 116 aa-0.19□□□□□ -2.44
Retrieved 100 of 20,778 RNA–protein pairs in 77 ms