RNA–Protein interactions for RNA: ENST00000550872.1

CHMP1A-209, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 2

Gene CHMP1A, Length 533 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-209ENST00000550872 OR10J3Q5JRS4 329 aa11.11□□□□□ -0.63
CHMP1A-209ENST00000550872 LELP1Q5T871 98 aa11.11□□□□□ -0.63
CHMP1A-209ENST00000550872 DNAJC30Q96LL9 226 aa11.11□□□□□ -0.63
CHMP1A-209ENST00000550872 TMEM191AQ9H0A3 160 aa11.11□□□□□ -0.63
CHMP1A-209ENST00000550872 TNFRSF18Q9Y5U5 241 aa11.11□□□□□ -0.63
CHMP1A-209ENST00000550872 Q6ZR54 194 aa11.1□□□□□ -0.63
CHMP1A-209ENST00000550872 WFDC10BQ8IUB3 73 aa11.1□□□□□ -0.63
CHMP1A-209ENST00000550872 SREK1IP1Q8N9Q2 155 aaPredicted RBP11.1□□□□□ -0.63
CHMP1A-209ENST00000550872 HYDINQ4G0P3 5121 aa11.09□□□□□ -0.63
CHMP1A-209ENST00000550872 A0A087WWC5 75 aa11.09□□□□□ -0.63
CHMP1A-209ENST00000550872 TRAV26-2A0A0B4J265 109 aa11.09□□□□□ -0.63
CHMP1A-209ENST00000550872 IGHV3-38A0A0C4DH36 116 aa11.09□□□□□ -0.63
CHMP1A-209ENST00000550872 A0A1B0GW15 77 aa11.09□□□□□ -0.63
CHMP1A-209ENST00000550872 CAMPP49913 170 aa11.09□□□□□ -0.63
CHMP1A-209ENST00000550872 C10orf91Q5T1B1 145 aa11.09□□□□□ -0.63
CHMP1A-209ENST00000550872 MRPL54Q6P161 138 aaKnown RBP11.09□□□□□ -0.63
CHMP1A-209ENST00000550872 GATD1Q8NB37 220 aa11.09□□□□□ -0.63
CHMP1A-209ENST00000550872 NIT2Q9NQR4 276 aa11.09□□□□□ -0.63
CHMP1A-209ENST00000550872 CARHSP1Q9Y2V2 147 aaKnown RBP11.09□□□□□ -0.63
CHMP1A-209ENST00000550872 VPS13DQ5THJ4 4388 aa11.08□□□□□ -0.64
CHMP1A-209ENST00000550872 TTC32Q5I0X7 151 aa11.08□□□□□ -0.64
CHMP1A-209ENST00000550872 AMN1Q8IY45 258 aa11.08□□□□□ -0.64
CHMP1A-209ENST00000550872 S100A8P05109 93 aa11.07□□□□□ -0.64
CHMP1A-209ENST00000550872 RAB4AP20338 218 aa11.07□□□□□ -0.64
CHMP1A-209ENST00000550872 HBBP68871 147 aa11.07□□□□□ -0.64
CHMP1A-209ENST00000550872 RNF185Q96GF1 192 aa11.07□□□□□ -0.64
CHMP1A-209ENST00000550872 CTDSP1Q9GZU7 261 aa11.07□□□□□ -0.64
CHMP1A-209ENST00000550872 DAZ4Q86SG3 579 aaKnown RBP11.06□□□□□ -0.64
CHMP1A-209ENST00000550872 FRZBQ92765 325 aa11.06□□□□□ -0.64
CHMP1A-209ENST00000550872 DAZ3Q9NR90 486 aaKnown RBP11.06□□□□□ -0.64
CHMP1A-209ENST00000550872 TRAV9-2A0A087WT02 112 aa11.05□□□□□ -0.64
CHMP1A-209ENST00000550872 A0A1B0GXF2 115 aa11.05□□□□□ -0.64
CHMP1A-209ENST00000550872 DNAH10OSP0CZ25 163 aa11.05□□□□□ -0.64
CHMP1A-209ENST00000550872 FAM104BQ5XKR9 115 aa11.05□□□□□ -0.64
CHMP1A-209ENST00000550872 CLRN3Q8NCR9 226 aa11.05□□□□□ -0.64
CHMP1A-209ENST00000550872 RPL39LQ96EH5 51 aaKnown RBP11.05□□□□□ -0.64
CHMP1A-209ENST00000550872 KRTAP1-5Q9BYS1 174 aa11.05□□□□□ -0.64
CHMP1A-209ENST00000550872 C7orf77A4D0Y5 90 aa11.04□□□□□ -0.64
CHMP1A-209ENST00000550872 APOC3P02656 99 aa11.04□□□□□ -0.64
CHMP1A-209ENST00000550872 NDUFA5Q16718 116 aa11.04□□□□□ -0.64
CHMP1A-209ENST00000550872 TMEM97Q5BJF2 176 aa11.04□□□□□ -0.64
CHMP1A-209ENST00000550872 C1orf134Q5TEV5 83 aa11.04□□□□□ -0.64
CHMP1A-209ENST00000550872 ATP5L2Q7Z4Y8 100 aa11.04□□□□□ -0.64
CHMP1A-209ENST00000550872 MRAP2Q96G30 205 aa11.04□□□□□ -0.64
CHMP1A-209ENST00000550872 IMMP2LQ96T52 175 aa11.04□□□□□ -0.64
CHMP1A-209ENST00000550872 TRBV6-8A0A0A6YYG3 113 aa11.03□□□□□ -0.64
CHMP1A-209ENST00000550872 KCNIP4Q6PIL6 250 aa11.03□□□□□ -0.64
CHMP1A-209ENST00000550872 BTF3L4Q96K17 158 aa11.03□□□□□ -0.64
CHMP1A-209ENST00000550872 RPS10P5Q9NQ39 176 aa11.03□□□□□ -0.64
CHMP1A-209ENST00000550872 GAS8-AS1O95177 125 aa11.02□□□□□ -0.65
CHMP1A-209ENST00000550872 IGHV3-30P01768 117 aa11.02□□□□□ -0.65
CHMP1A-209ENST00000550872 IGHV3-33P01772 117 aa11.02□□□□□ -0.65
CHMP1A-209ENST00000550872 IGHV3-30-3P0DP02 117 aa11.02□□□□□ -0.65
CHMP1A-209ENST00000550872 IGHV3-30-5P0DP03 117 aa11.02□□□□□ -0.65
CHMP1A-209ENST00000550872 RHEBQ15382 184 aa11.02□□□□□ -0.65
CHMP1A-209ENST00000550872 MRPL51Q4U2R6 128 aaKnown RBP11.02□□□□□ -0.65
CHMP1A-209ENST00000550872 LINC01556Q5JQF7 62 aa11.02□□□□□ -0.65
CHMP1A-209ENST00000550872 NTM-AS1Q6ZSK4 140 aa11.02□□□□□ -0.65
CHMP1A-209ENST00000550872 C6orf223Q8N319 242 aa11.02□□□□□ -0.65
CHMP1A-209ENST00000550872 FRAS1Q86XX4 4008 aa11.02□□□□□ -0.65
CHMP1A-209ENST00000550872 KMT2AQ03164 3969 aa11.01□□□□□ -0.65
CHMP1A-209ENST00000550872 SMKR1H3BMG3 65 aa11.01□□□□□ -0.65
CHMP1A-209ENST00000550872 K7EP13 123 aa11.01□□□□□ -0.65
CHMP1A-209ENST00000550872 NCR2O95944 276 aa11.01□□□□□ -0.65
CHMP1A-209ENST00000550872 SLC7A5P1Q8MH63 180 aa11.01□□□□□ -0.65
CHMP1A-209ENST00000550872 C10orf126Q8N4M7 172 aa11.01□□□□□ -0.65
CHMP1A-209ENST00000550872 DEFB104AQ8WTQ1 72 aa11.01□□□□□ -0.65
CHMP1A-209ENST00000550872 TMEM242Q9NWH2 141 aa11.01□□□□□ -0.65
CHMP1A-209ENST00000550872 TRBV6-5A0A0K0K1A5 114 aa11□□□□□ -0.65
CHMP1A-209ENST00000550872 SDHAF1A6NFY7 115 aa11□□□□□ -0.65
CHMP1A-209ENST00000550872 S100PP25815 95 aa11□□□□□ -0.65
CHMP1A-209ENST00000550872 RPS10P46783 165 aaKnown RBP11□□□□□ -0.65
CHMP1A-209ENST00000550872 COTL1Q14019 142 aa11□□□□□ -0.65
CHMP1A-209ENST00000550872 NIT1Q86X76 327 aa11□□□□□ -0.65
CHMP1A-209ENST00000550872 CHCHD5Q9BSY4 110 aa11□□□□□ -0.65
CHMP1A-209ENST00000550872 ST20Q9HBF5 79 aa11□□□□□ -0.65
CHMP1A-209ENST00000550872 URGCP-MRPS24S4R325 110 aa11□□□□□ -0.65
CHMP1A-209ENST00000550872 TRBV25-1A0A075B6N4 114 aa10.99□□□□□ -0.65
CHMP1A-209ENST00000550872 IGHV1-24A0A0C4DH33 117 aa10.99□□□□□ -0.65
CHMP1A-209ENST00000550872 TMEM262E9PQX1 116 aa10.99□□□□□ -0.65
CHMP1A-209ENST00000550872 RTL8CO15255 209 aa10.99□□□□□ -0.65
CHMP1A-209ENST00000550872 SNAPINO95295 136 aa10.99□□□□□ -0.65
CHMP1A-209ENST00000550872 PPP1R17O96001 155 aa10.99□□□□□ -0.65
CHMP1A-209ENST00000550872 CKS2P33552 79 aa10.99□□□□□ -0.65
CHMP1A-209ENST00000550872 SVBPQ8N300 66 aa10.99□□□□□ -0.65
CHMP1A-209ENST00000550872 DNAH6Q9C0G6 4158 aa10.98□□□□□ -0.65
CHMP1A-209ENST00000550872 TRAV9-1A0A075B6T8 112 aa10.98□□□□□ -0.65
CHMP1A-209ENST00000550872 A0A087WX48 190 aa10.98□□□□□ -0.65
CHMP1A-209ENST00000550872 BTF3P20290 206 aaKnown RBP10.98□□□□□ -0.65
CHMP1A-209ENST00000550872 PMCHP20382 165 aa10.98□□□□□ -0.65
CHMP1A-209ENST00000550872 IQCJQ1A5X6 159 aa10.98□□□□□ -0.65
CHMP1A-209ENST00000550872 Q8N3U1 123 aa10.98□□□□□ -0.65
CHMP1A-209ENST00000550872 NRACQ8N912 160 aa10.97□□□□□ -0.65
CHMP1A-209ENST00000550872 TMEM70Q9BUB7 260 aa10.97□□□□□ -0.65
CHMP1A-209ENST00000550872 IBA57-AS1B1ANH7 110 aa10.96□□□□□ -0.65
CHMP1A-209ENST00000550872 D6R8Y8 96 aa10.96□□□□□ -0.65
CHMP1A-209ENST00000550872 I3L3M4 83 aa10.96□□□□□ -0.65
CHMP1A-209ENST00000550872 AMTP48728 403 aa10.96□□□□□ -0.65
CHMP1A-209ENST00000550872 POLR2KP53803 58 aaKnown RBP10.96□□□□□ -0.65
CHMP1A-209ENST00000550872 GAGE6Q13070 117 aa10.96□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 95.6 ms