RNA–Protein interactions for RNA: ENST00000550164.5

SMARCC2-209, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 2, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SMARCC2, Length 4,114 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2-209ENST00000550164 VCANP13611 3396 aa7.76□□□□□ -1.17
SMARCC2-209ENST00000550164 ABCA2Q9BZC7 2435 aa7.76□□□□□ -1.17
SMARCC2-209ENST00000550164 Q6ZUT4 128 aa7.76□□□□□ -1.17
SMARCC2-209ENST00000550164 PRSS47A8MTI9 375 aa7.75□□□□□ -1.17
SMARCC2-209ENST00000550164 TNFRSF13BO14836 293 aaPredicted RBP7.75□□□□□ -1.17
SMARCC2-209ENST00000550164 HIVEP3Q5T1R4 2406 aa7.75□□□□□ -1.17
SMARCC2-209ENST00000550164 IGHV4-59P01825 116 aa7.75□□□□□ -1.17
SMARCC2-209ENST00000550164 PRR9Q5T870 116 aa7.75□□□□□ -1.17
SMARCC2-209ENST00000550164 ZFAND2AQ8N6M9 145 aa7.75□□□□□ -1.17
SMARCC2-209ENST00000550164 CFHR3Q02985 330 aa7.74□□□□□ -1.17
SMARCC2-209ENST00000550164 MRGPRG-AS1Q2M3A8 158 aa7.74□□□□□ -1.17
SMARCC2-209ENST00000550164 PIFOQ8TCI5 191 aa7.74□□□□□ -1.17
SMARCC2-209ENST00000550164 RAI1Q7Z5J4 1906 aaPredicted RBP7.74□□□□□ -1.17
SMARCC2-209ENST00000550164 A0A0J9YY99 117 aa7.74□□□□□ -1.17
SMARCC2-209ENST00000550164 CEMP1Q6PRD7 247 aaPredicted RBP7.74□□□□□ -1.17
SMARCC2-209ENST00000550164 ATP6V0E2Q8NHE4 81 aa7.74□□□□□ -1.17
SMARCC2-209ENST00000550164 Q9H8V8 135 aa7.74□□□□□ -1.17
SMARCC2-209ENST00000550164 EDA2RQ9HAV5 297 aa7.74□□□□□ -1.17
SMARCC2-209ENST00000550164 H3BUA1 57 aa7.74□□□□□ -1.17
SMARCC2-209ENST00000550164 MED14OSP0DP75 135 aa7.73□□□□□ -1.17
SMARCC2-209ENST00000550164 HIST1H4AP62805 103 aaKnown RBP7.73□□□□□ -1.17
SMARCC2-209ENST00000550164 DEFB136Q30KP8 78 aa7.73□□□□□ -1.17
SMARCC2-209ENST00000550164 C9orf153Q5TBE3 101 aa7.73□□□□□ -1.17
SMARCC2-209ENST00000550164 RNF183Q96D59 192 aa7.73□□□□□ -1.17
SMARCC2-209ENST00000550164 CNFNQ9BYD5 112 aa7.73□□□□□ -1.17
SMARCC2-209ENST00000550164 SPTBN4Q9H254 2564 aa7.73□□□□□ -1.17
SMARCC2-209ENST00000550164 PIEZO1Q92508 2521 aa7.73□□□□□ -1.17
SMARCC2-209ENST00000550164 RPL35AP18077 110 aaKnown RBP7.73□□□□□ -1.17
SMARCC2-209ENST00000550164 PFN2P35080 140 aa7.73□□□□□ -1.17
SMARCC2-209ENST00000550164 ICOSQ9Y6W8 199 aa7.73□□□□□ -1.17
SMARCC2-209ENST00000550164 RS1O15537 224 aa7.73□□□□□ -1.17
SMARCC2-209ENST00000550164 C6orf226Q5I0X4 101 aa7.73□□□□□ -1.17
SMARCC2-209ENST00000550164 HOXD3P31249 432 aaPredicted RBP7.72□□□□□ -1.17
SMARCC2-209ENST00000550164 C20orf203Q8NBC4 194 aa7.72□□□□□ -1.17
SMARCC2-209ENST00000550164 CLEC2BQ92478 149 aa7.72□□□□□ -1.17
SMARCC2-209ENST00000550164 TRBV7-3A0A075B6L6 115 aa7.72□□□□□ -1.17
SMARCC2-209ENST00000550164 EBI3Q14213 229 aa7.72□□□□□ -1.17
SMARCC2-209ENST00000550164 CFAP161Q6P656 301 aa7.72□□□□□ -1.17
SMARCC2-209ENST00000550164 TMEM86BQ8N661 226 aa7.72□□□□□ -1.17
SMARCC2-209ENST00000550164 CELSR3Q9NYQ7 3312 aa7.72□□□□□ -1.17
SMARCC2-209ENST00000550164 IGHV3-30-3P0DP02 117 aa7.72□□□□□ -1.17
SMARCC2-209ENST00000550164 DEFB112Q30KQ8 113 aa7.72□□□□□ -1.17
SMARCC2-209ENST00000550164 SLC25A29Q8N8R3 303 aa7.72□□□□□ -1.17
SMARCC2-209ENST00000550164 SZT2Q5T011 3432 aa7.71□□□□□ -1.17
SMARCC2-209ENST00000550164 FBXL19-AS1Q494R0 122 aa7.71□□□□□ -1.17
SMARCC2-209ENST00000550164 F8W735 103 aaPredicted RBP7.71□□□□□ -1.17
SMARCC2-209ENST00000550164 P0DMU3 169 aa7.71□□□□□ -1.18
SMARCC2-209ENST00000550164 FAM231AP0DMU4 169 aa7.71□□□□□ -1.18
SMARCC2-209ENST00000550164 FAM231CP0DMU5 169 aa7.71□□□□□ -1.18
SMARCC2-209ENST00000550164 LMO4P61968 165 aa7.71□□□□□ -1.18
SMARCC2-209ENST00000550164 C3orf56Q8N813 242 aa7.71□□□□□ -1.18
SMARCC2-209ENST00000550164 LINC01356Q8N9X3 169 aa7.71□□□□□ -1.18
SMARCC2-209ENST00000550164 RNF223E7ERA6 249 aa7.71□□□□□ -1.18
SMARCC2-209ENST00000550164 HTN3P15516 51 aa7.7□□□□□ -1.18
SMARCC2-209ENST00000550164 SMIM20Q8N5G0 67 aa7.7□□□□□ -1.18
SMARCC2-209ENST00000550164 U3KQE9 123 aa7.7□□□□□ -1.18
SMARCC2-209ENST00000550164 IGHG2P01859 326 aa7.7□□□□□ -1.18
SMARCC2-209ENST00000550164 INAFM2P0DMQ5 153 aa7.7□□□□□ -1.18
SMARCC2-209ENST00000550164 CFAP126Q5VTH2 177 aa7.7□□□□□ -1.18
SMARCC2-209ENST00000550164 Q6ZS46 218 aa7.7□□□□□ -1.18
SMARCC2-209ENST00000550164 Q8N6K4 173 aa7.7□□□□□ -1.18
SMARCC2-209ENST00000550164 WDFY4Q6ZS81 3184 aa7.7□□□□□ -1.18
SMARCC2-209ENST00000550164 IGHV4-30-2A0A087WSY4 118 aa7.7□□□□□ -1.18
SMARCC2-209ENST00000550164 TEX49A0A1B0GTD5 131 aa7.7□□□□□ -1.18
SMARCC2-209ENST00000550164 MALP21145 153 aa7.7□□□□□ -1.18
SMARCC2-209ENST00000550164 HERVK_113P63121 156 aa7.7□□□□□ -1.18
SMARCC2-209ENST00000550164 APRG1Q8IVJ8 170 aa7.7□□□□□ -1.18
SMARCC2-209ENST00000550164 TRBV10-2A0A0K0K1G8 114 aa7.69□□□□□ -1.18
SMARCC2-209ENST00000550164 CLPSL1A2RUU4 121 aa7.69□□□□□ -1.18
SMARCC2-209ENST00000550164 PF4P02776 101 aa7.69□□□□□ -1.18
SMARCC2-209ENST00000550164 DSCR9P59020 149 aa7.69□□□□□ -1.18
SMARCC2-209ENST00000550164 ZMAT4Q9H898 229 aa7.69□□□□□ -1.18
SMARCC2-209ENST00000550164 SPANXA1Q9NS26 97 aa7.69□□□□□ -1.18
SMARCC2-209ENST00000550164 DEFB130BP0DP73 79 aa7.69□□□□□ -1.18
SMARCC2-209ENST00000550164 DEFB130AP0DP74 79 aa7.69□□□□□ -1.18
SMARCC2-209ENST00000550164 RNASE3P12724 160 aaKnown RBP7.69□□□□□ -1.18
SMARCC2-209ENST00000550164 A0A0J9YXY3 114 aa7.69□□□□□ -1.18
SMARCC2-209ENST00000550164 BAALC-AS2P0C853 105 aa7.69□□□□□ -1.18
SMARCC2-209ENST00000550164 SPEGQ15772 3267 aa7.69□□□□□ -1.18
SMARCC2-209ENST00000550164 A0A0J9YX75 114 aa7.68□□□□□ -1.18
SMARCC2-209ENST00000550164 LINC01619G3V211 115 aa7.68□□□□□ -1.18
SMARCC2-209ENST00000550164 IGHG4P01861 327 aa7.68□□□□□ -1.18
SMARCC2-209ENST00000550164 SLURP1P55000 103 aa7.68□□□□□ -1.18
SMARCC2-209ENST00000550164 SPATA25Q9BR10 227 aa7.68□□□□□ -1.18
SMARCC2-209ENST00000550164 NBEAQ8NFP9 2946 aa7.68□□□□□ -1.18
SMARCC2-209ENST00000550164 XGP55808 180 aa7.68□□□□□ -1.18
SMARCC2-209ENST00000550164 ZNF22P17026 224 aaPredicted RBP7.68□□□□□ -1.18
SMARCC2-209ENST00000550164 TMEM243Q9BU79 118 aa7.68□□□□□ -1.18
SMARCC2-209ENST00000550164 GATA3P23771 443 aa7.67□□□□□ -1.18
SMARCC2-209ENST00000550164 IGHV1-58A0A0C4DH39 117 aa7.67□□□□□ -1.18
SMARCC2-209ENST00000550164 K7EMT4 169 aa7.67□□□□□ -1.18
SMARCC2-209ENST00000550164 ELANEP08246 267 aa7.67□□□□□ -1.18
SMARCC2-209ENST00000550164 S100A7L2Q5SY68 101 aa7.67□□□□□ -1.18
SMARCC2-209ENST00000550164 PCSK5Q92824 1860 aa7.67□□□□□ -1.18
SMARCC2-209ENST00000550164 IGHV4OR15-8A0A075B7B6 117 aa7.67□□□□□ -1.18
SMARCC2-209ENST00000550164 A0A087WW49 117 aa7.67□□□□□ -1.18
SMARCC2-209ENST00000550164 IGHV3-33P01772 117 aa7.67□□□□□ -1.18
SMARCC2-209ENST00000550164 IGHV4-4A0A075B6R2 117 aa7.67□□□□□ -1.18
SMARCC2-209ENST00000550164 NXPH4O95158 308 aa7.67□□□□□ -1.18
SMARCC2-209ENST00000550164 IGHV3-30P01768 117 aa7.67□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms