RNA–Protein interactions for RNA: ENST00000550102.5

CHMP1A-208, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 5 BASIC

Gene CHMP1A, Length 803 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-208ENST00000550102 CNFNQ9BYD5 112 aa11.56□□□□□ -0.56
CHMP1A-208ENST00000550102 WDR73Q6P4I2 378 aa11.55□□□□□ -0.56
CHMP1A-208ENST00000550102 FAM231DQ6ZW35 169 aa11.55□□□□□ -0.56
CHMP1A-208ENST00000550102 DAZ4Q86SG3 579 aaKnown RBP11.55□□□□□ -0.56
CHMP1A-208ENST00000550102 CHCHD7Q9BUK0 85 aa11.55□□□□□ -0.56
CHMP1A-208ENST00000550102 DAZ3Q9NR90 486 aaKnown RBP11.55□□□□□ -0.56
CHMP1A-208ENST00000550102 A0A087WX48 190 aa11.54□□□□□ -0.56
CHMP1A-208ENST00000550102 TRBV6-8A0A0A6YYG3 113 aa11.54□□□□□ -0.56
CHMP1A-208ENST00000550102 TRAV8-3A0A0A6YYJ7 113 aa11.54□□□□□ -0.56
CHMP1A-208ENST00000550102 GATCO43716 136 aaKnown RBP11.54□□□□□ -0.56
CHMP1A-208ENST00000550102 CDK2AP2O75956 126 aa11.54□□□□□ -0.56
CHMP1A-208ENST00000550102 NTF3P20783 257 aa11.54□□□□□ -0.56
CHMP1A-208ENST00000550102 SUMO4Q6EEV6 95 aa11.54□□□□□ -0.56
CHMP1A-208ENST00000550102 KCNIP4Q6PIL6 250 aa11.54□□□□□ -0.56
CHMP1A-208ENST00000550102 TEX261Q6UWH6 196 aa11.54□□□□□ -0.56
CHMP1A-208ENST00000550102 TM2D2Q9BX73 214 aa11.54□□□□□ -0.56
CHMP1A-208ENST00000550102 DPH3P1Q9H4G8 78 aa11.54□□□□□ -0.56
CHMP1A-208ENST00000550102 PGPEP1Q9NXJ5 209 aa11.54□□□□□ -0.56
CHMP1A-208ENST00000550102 ZNF727A8MUV8 499 aa11.53□□□□□ -0.56
CHMP1A-208ENST00000550102 M0QY20 66 aa11.53□□□□□ -0.56
CHMP1A-208ENST00000550102 SRP19P09132 144 aaKnown RBP11.53□□□□□ -0.56
CHMP1A-208ENST00000550102 TMEM97Q5BJF2 176 aa11.53□□□□□ -0.56
CHMP1A-208ENST00000550102 CT83Q5H943 113 aa11.53□□□□□ -0.56
CHMP1A-208ENST00000550102 A8MWL6 223 aa11.52□□□□□ -0.57
CHMP1A-208ENST00000550102 TWIST1Q15672 202 aa11.52□□□□□ -0.57
CHMP1A-208ENST00000550102 LINC01551Q86U37 167 aa11.52□□□□□ -0.57
CHMP1A-208ENST00000550102 GTSF1Q8WW33 167 aa11.52□□□□□ -0.57
CHMP1A-208ENST00000550102 DNAJC30Q96LL9 226 aa11.52□□□□□ -0.57
CHMP1A-208ENST00000550102 PKIAP61925 76 aa11.51□□□□□ -0.57
CHMP1A-208ENST00000550102 ELOBQ15370 118 aa11.51□□□□□ -0.57
CHMP1A-208ENST00000550102 RASL11AQ6T310 242 aa11.51□□□□□ -0.57
CHMP1A-208ENST00000550102 LRCOL1A6NCL2 159 aa11.5□□□□□ -0.57
CHMP1A-208ENST00000550102 RMI2Q96E14 147 aa11.5□□□□□ -0.57
CHMP1A-208ENST00000550102 CHCHD5Q9BSY4 110 aa11.5□□□□□ -0.57
CHMP1A-208ENST00000550102 KLK12Q9UKR0 248 aa11.5□□□□□ -0.57
CHMP1A-208ENST00000550102 FUSP35637 526 aaKnown RBP eCLIP11.49□□□□□ -0.57
CHMP1A-208ENST00000550102 SMIM15Q7Z3B0 74 aa11.49□□□□□ -0.57
CHMP1A-208ENST00000550102 COX11Q9Y6N1 276 aa11.49□□□□□ -0.57
CHMP1A-208ENST00000550102 TRBV25-1A0A075B6N4 114 aa11.48□□□□□ -0.57
CHMP1A-208ENST00000550102 TMEM262E9PQX1 116 aa11.48□□□□□ -0.57
CHMP1A-208ENST00000550102 FAM74A3Q4VXF1 159 aa11.48□□□□□ -0.57
CHMP1A-208ENST00000550102 BORCS7Q96B45 105 aa11.48□□□□□ -0.57
CHMP1A-208ENST00000550102 PGLYRP4Q96LB8 373 aa11.48□□□□□ -0.57
CHMP1A-208ENST00000550102 MPV17L2Q567V2 206 aa11.47□□□□□ -0.57
CHMP1A-208ENST00000550102 NTM-AS1Q6ZSK4 140 aa11.47□□□□□ -0.57
CHMP1A-208ENST00000550102 C15orf54Q8N8G6 183 aa11.47□□□□□ -0.57
CHMP1A-208ENST00000550102 NTN5Q8WTR8 489 aaPredicted RBP11.47□□□□□ -0.57
CHMP1A-208ENST00000550102 TSKUQ8WUA8 353 aa11.47□□□□□ -0.57
CHMP1A-208ENST00000550102 UBE2WQ96B02 151 aa11.47□□□□□ -0.57
CHMP1A-208ENST00000550102 NIT2Q9NQR4 276 aa11.47□□□□□ -0.57
CHMP1A-208ENST00000550102 OSTCQ9NRP0 149 aa11.47□□□□□ -0.57
CHMP1A-208ENST00000550102 LRP1BQ9NZR2 4599 aa11.47□□□□□ -0.57
CHMP1A-208ENST00000550102 IGHV1-24A0A0C4DH33 117 aa11.46□□□□□ -0.57
CHMP1A-208ENST00000550102 PEA15Q15121 130 aa11.46□□□□□ -0.57
CHMP1A-208ENST00000550102 IQCJQ1A5X6 159 aa11.46□□□□□ -0.57
CHMP1A-208ENST00000550102 Q8N814 137 aa11.46□□□□□ -0.57
CHMP1A-208ENST00000550102 GFRA4Q9GZZ7 299 aa11.46□□□□□ -0.57
CHMP1A-208ENST00000550102 RYR1P21817 5038 aa11.45□□□□□ -0.58
CHMP1A-208ENST00000550102 IGKV2D-24A0A075B6R9 120 aa11.45□□□□□ -0.58
CHMP1A-208ENST00000550102 FAM231BA6NCW3 169 aa11.45□□□□□ -0.58
CHMP1A-208ENST00000550102 HIGD1CA8MV81 97 aa11.45□□□□□ -0.58
CHMP1A-208ENST00000550102 CRPP02741 224 aa11.45□□□□□ -0.58
CHMP1A-208ENST00000550102 ANGP03950 147 aaKnown RBP11.45□□□□□ -0.58
CHMP1A-208ENST00000550102 Q0VG73 95 aa11.45□□□□□ -0.58
CHMP1A-208ENST00000550102 TMEM241Q24JQ0 296 aa11.45□□□□□ -0.58
CHMP1A-208ENST00000550102 FRZBQ92765 325 aa11.45□□□□□ -0.58
CHMP1A-208ENST00000550102 SMDT1Q9H4I9 107 aa11.45□□□□□ -0.58
CHMP1A-208ENST00000550102 IGLV5-52A0A0A0MRZ9 124 aa11.44□□□□□ -0.58
CHMP1A-208ENST00000550102 TRAV26-2A0A0B4J265 109 aa11.44□□□□□ -0.58
CHMP1A-208ENST00000550102 C9JQL5 133 aa11.44□□□□□ -0.58
CHMP1A-208ENST00000550102 FOXA3P55318 350 aaPredicted RBP11.44□□□□□ -0.58
CHMP1A-208ENST00000550102 ADIRFQ15847 76 aa11.44□□□□□ -0.58
CHMP1A-208ENST00000550102 ATRAIDQ6UW56 229 aa11.44□□□□□ -0.58
CHMP1A-208ENST00000550102 GATD1Q8NB37 220 aa11.44□□□□□ -0.58
CHMP1A-208ENST00000550102 ISOC2Q96AB3 205 aa11.44□□□□□ -0.58
CHMP1A-208ENST00000550102 NAT8Q9UHE5 227 aa11.44□□□□□ -0.58
CHMP1A-208ENST00000550102 A0A1B0GUT8 65 aa11.43□□□□□ -0.58
CHMP1A-208ENST00000550102 RPL23P62829 140 aaKnown RBP11.43□□□□□ -0.58
CHMP1A-208ENST00000550102 Q8N976 141 aa11.43□□□□□ -0.58
CHMP1A-208ENST00000550102 TMEM243Q9BU79 118 aa11.43□□□□□ -0.58
CHMP1A-208ENST00000550102 C1orf43Q9BWL3 253 aa11.43□□□□□ -0.58
CHMP1A-208ENST00000550102 V9GYV3 84 aa11.43□□□□□ -0.58
CHMP1A-208ENST00000550102 HSPG2P98160 4391 aa11.43□□□□□ -0.58
CHMP1A-208ENST00000550102 DNAH5Q8TE73 4624 aa11.43□□□□□ -0.58
CHMP1A-208ENST00000550102 GCSHP23434 173 aa11.42□□□□□ -0.58
CHMP1A-208ENST00000550102 SRSF3P84103 164 aaKnown RBP11.42□□□□□ -0.58
CHMP1A-208ENST00000550102 GAGE6Q13070 117 aa11.42□□□□□ -0.58
CHMP1A-208ENST00000550102 COTL1Q14019 142 aa11.42□□□□□ -0.58
CHMP1A-208ENST00000550102 WFDC2Q14508 124 aa11.42□□□□□ -0.58
CHMP1A-208ENST00000550102 MAPKAPK5-AS1Q8N8E1 139 aa11.42□□□□□ -0.58
CHMP1A-208ENST00000550102 LECT2O14960 151 aa11.41□□□□□ -0.58
CHMP1A-208ENST00000550102 KRTAP10-1P60331 282 aa11.41□□□□□ -0.58
CHMP1A-208ENST00000550102 RBX1P62877 108 aa11.41□□□□□ -0.58
CHMP1A-208ENST00000550102 KRTAP17-1Q9BYP8 105 aa11.41□□□□□ -0.58
CHMP1A-208ENST00000550102 AMTP48728 403 aa11.4□□□□□ -0.58
CHMP1A-208ENST00000550102 ENHOQ6UWT2 76 aa11.4□□□□□ -0.58
CHMP1A-208ENST00000550102 RPL39LQ96EH5 51 aaKnown RBP11.4□□□□□ -0.58
CHMP1A-208ENST00000550102 PCLOQ9Y6V0 5065 aa11.39□□□□□ -0.59
CHMP1A-208ENST00000550102 APOBP04114 4563 aaKnown RBP11.39□□□□□ -0.59
CHMP1A-208ENST00000550102 MIAQ16674 131 aa11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 76.3 ms