RNA–Protein interactions for RNA: ENST00000550016.5

DDX54-207, Transcript of DEAD-box helicase 54, humanhuman

TSL 5

Gene DDX54, Length 594 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-207ENST00000550016 DNAJC30Q96LL9 226 aa13.19□□□□□ -0.3
DDX54-207ENST00000550016 TRAV9-2A0A087WT02 112 aa13.18□□□□□ -0.3
DDX54-207ENST00000550016 IGHV3-38A0A0C4DH36 116 aa13.18□□□□□ -0.3
DDX54-207ENST00000550016 LINC00862A6NCI5 91 aa13.18□□□□□ -0.3
DDX54-207ENST00000550016 RTL8CO15255 209 aa13.18□□□□□ -0.3
DDX54-207ENST00000550016 RIGQ13278 110 aa13.18□□□□□ -0.3
DDX54-207ENST00000550016 RASL11AQ6T310 242 aa13.18□□□□□ -0.3
DDX54-207ENST00000550016 COMMD7Q86VX2 200 aa13.18□□□□□ -0.3
DDX54-207ENST00000550016 C6orf223Q8N319 242 aa13.18□□□□□ -0.3
DDX54-207ENST00000550016 TNFRSF18Q9Y5U5 241 aa13.18□□□□□ -0.3
DDX54-207ENST00000550016 TMEM218A2RU14 115 aa13.17□□□□□ -0.3
DDX54-207ENST00000550016 K7EP13 123 aa13.17□□□□□ -0.3
DDX54-207ENST00000550016 PPP1R2P9O14990 202 aa13.17□□□□□ -0.3
DDX54-207ENST00000550016 LINC00336Q6ZUF6 198 aa13.17□□□□□ -0.3
DDX54-207ENST00000550016 SREK1IP1Q8N9Q2 155 aaPredicted RBP13.17□□□□□ -0.3
DDX54-207ENST00000550016 BTF3P20290 206 aaKnown RBP13.16□□□□□ -0.3
DDX54-207ENST00000550016 NIT2Q9NQR4 276 aa13.16□□□□□ -0.3
DDX54-207ENST00000550016 LINC01556Q5JQF7 62 aa13.15□□□□□ -0.3
DDX54-207ENST00000550016 DAZ4Q86SG3 579 aaKnown RBP13.15□□□□□ -0.3
DDX54-207ENST00000550016 GATD1Q8NB37 220 aa13.15□□□□□ -0.3
DDX54-207ENST00000550016 TMEM191AQ9H0A3 160 aa13.15□□□□□ -0.3
DDX54-207ENST00000550016 DAZ3Q9NR90 486 aaKnown RBP13.15□□□□□ -0.3
DDX54-207ENST00000550016 F8W036 122 aa13.14□□□□□ -0.31
DDX54-207ENST00000550016 MT-ND4LP03901 98 aa13.14□□□□□ -0.31
DDX54-207ENST00000550016 ANAPC16Q96DE5 110 aa13.14□□□□□ -0.31
DDX54-207ENST00000550016 ADCYAP1P18509 176 aa13.13□□□□□ -0.31
DDX54-207ENST00000550016 TMEM97Q5BJF2 176 aa13.13□□□□□ -0.31
DDX54-207ENST00000550016 FRZBQ92765 325 aa13.13□□□□□ -0.31
DDX54-207ENST00000550016 TRAV26-2A0A0B4J265 109 aa13.12□□□□□ -0.31
DDX54-207ENST00000550016 C10orf126Q8N4M7 172 aa13.12□□□□□ -0.31
DDX54-207ENST00000550016 SEC11CQ9BY50 192 aa13.12□□□□□ -0.31
DDX54-207ENST00000550016 TRBV6-8A0A0A6YYG3 113 aa13.11□□□□□ -0.31
DDX54-207ENST00000550016 A0A1B0GW15 77 aa13.11□□□□□ -0.31
DDX54-207ENST00000550016 PRSS29PA6NIE9 313 aa13.11□□□□□ -0.31
DDX54-207ENST00000550016 IGHV3-30P01768 117 aa13.1□□□□□ -0.31
DDX54-207ENST00000550016 IGHV3-33P01772 117 aa13.1□□□□□ -0.31
DDX54-207ENST00000550016 IGHV3-30-3P0DP02 117 aa13.1□□□□□ -0.31
DDX54-207ENST00000550016 IGHV3-30-5P0DP03 117 aa13.1□□□□□ -0.31
DDX54-207ENST00000550016 RAB4AP20338 218 aa13.09□□□□□ -0.31
DDX54-207ENST00000550016 NTM-AS1Q6ZSK4 140 aa13.09□□□□□ -0.31
DDX54-207ENST00000550016 NIT1Q86X76 327 aa13.09□□□□□ -0.31
DDX54-207ENST00000550016 AMN1Q8IY45 258 aa13.09□□□□□ -0.31
DDX54-207ENST00000550016 RNF185Q96GF1 192 aa13.09□□□□□ -0.31
DDX54-207ENST00000550016 FRAS1Q86XX4 4008 aa13.08□□□□□ -0.32
DDX54-207ENST00000550016 CAMPP49913 170 aa13.08□□□□□ -0.32
DDX54-207ENST00000550016 KCNIP4Q6PIL6 250 aa13.08□□□□□ -0.32
DDX54-207ENST00000550016 NFE4Q86UQ8 179 aa13.08□□□□□ -0.32
DDX54-207ENST00000550016 RPL39LQ96EH5 51 aaKnown RBP13.08□□□□□ -0.32
DDX54-207ENST00000550016 MRAP2Q96G30 205 aa13.08□□□□□ -0.32
DDX54-207ENST00000550016 URGCP-MRPS24S4R325 110 aa13.08□□□□□ -0.32
DDX54-207ENST00000550016 IBA57-AS1B1ANH7 110 aa13.07□□□□□ -0.32
DDX54-207ENST00000550016 S100A8P05109 93 aa13.07□□□□□ -0.32
DDX54-207ENST00000550016 MRPL54Q6P161 138 aaKnown RBP13.07□□□□□ -0.32
DDX54-207ENST00000550016 A0A1B0GXF2 115 aa13.06□□□□□ -0.32
DDX54-207ENST00000550016 HBBP68871 147 aa13.06□□□□□ -0.32
DDX54-207ENST00000550016 C10orf91Q5T1B1 145 aa13.06□□□□□ -0.32
DDX54-207ENST00000550016 FAM104BQ5XKR9 115 aa13.06□□□□□ -0.32
DDX54-207ENST00000550016 Q8N3U1 123 aa13.06□□□□□ -0.32
DDX54-207ENST00000550016 TRBV25-1A0A075B6N4 114 aa13.05□□□□□ -0.32
DDX54-207ENST00000550016 IGHV1-24A0A0C4DH33 117 aa13.05□□□□□ -0.32
DDX54-207ENST00000550016 IQCJQ1A5X6 159 aa13.05□□□□□ -0.32
DDX54-207ENST00000550016 Q6ZRN7 208 aaPredicted RBP13.05□□□□□ -0.32
DDX54-207ENST00000550016 ATP5L2Q7Z4Y8 100 aa13.05□□□□□ -0.32
DDX54-207ENST00000550016 CHCHD5Q9BSY4 110 aa13.05□□□□□ -0.32
DDX54-207ENST00000550016 CHCHD7Q9BUK0 85 aa13.05□□□□□ -0.32
DDX54-207ENST00000550016 A0A087WX48 190 aa13.04□□□□□ -0.32
DDX54-207ENST00000550016 TRBV6-5A0A0K0K1A5 114 aa13.04□□□□□ -0.32
DDX54-207ENST00000550016 TMEM262E9PQX1 116 aa13.04□□□□□ -0.32
DDX54-207ENST00000550016 GAS8-AS1O95177 125 aa13.04□□□□□ -0.32
DDX54-207ENST00000550016 PKIAP61925 76 aa13.04□□□□□ -0.32
DDX54-207ENST00000550016 TNP2Q05952 138 aa13.04□□□□□ -0.32
DDX54-207ENST00000550016 CTDSP1Q9GZU7 261 aa13.04□□□□□ -0.32
DDX54-207ENST00000550016 CARHSP1Q9Y2V2 147 aaKnown RBP13.04□□□□□ -0.32
DDX54-207ENST00000550016 COTL1Q14019 142 aa13.03□□□□□ -0.32
DDX54-207ENST00000550016 LAGE3Q14657 143 aa13.03□□□□□ -0.32
DDX54-207ENST00000550016 MRPL51Q4U2R6 128 aaKnown RBP13.03□□□□□ -0.32
DDX54-207ENST00000550016 IMMP2LQ96T52 175 aa13.03□□□□□ -0.32
DDX54-207ENST00000550016 ST20Q9HBF5 79 aa13.03□□□□□ -0.32
DDX54-207ENST00000550016 DNAH10Q8IVF4 4471 aa13.02□□□□□ -0.32
DDX54-207ENST00000550016 A0A1B0GVY2 172 aa13.02□□□□□ -0.33
DDX54-207ENST00000550016 SDHAF1A6NFY7 115 aa13.02□□□□□ -0.33
DDX54-207ENST00000550016 PPP1R17O96001 155 aa13.02□□□□□ -0.33
DDX54-207ENST00000550016 SMKR1H3BMG3 65 aa13.01□□□□□ -0.33
DDX54-207ENST00000550016 RPS10P46783 165 aaKnown RBP13.01□□□□□ -0.33
DDX54-207ENST00000550016 ELOBQ15370 118 aa13.01□□□□□ -0.33
DDX54-207ENST00000550016 BTF3L4Q96K17 158 aa13.01□□□□□ -0.33
DDX54-207ENST00000550016 TMEM243Q9BU79 118 aa13.01□□□□□ -0.33
DDX54-207ENST00000550016 NCR2O95944 276 aa13□□□□□ -0.33
DDX54-207ENST00000550016 PMCHP20382 165 aa13□□□□□ -0.33
DDX54-207ENST00000550016 DEFB104AQ8WTQ1 72 aa13□□□□□ -0.33
DDX54-207ENST00000550016 Q9HAA7 133 aa13□□□□□ -0.33
DDX54-207ENST00000550016 KLK12Q9UKR0 248 aa13□□□□□ -0.33
DDX54-207ENST00000550016 TRAV8-3A0A0A6YYJ7 113 aa12.99□□□□□ -0.33
DDX54-207ENST00000550016 I3L3M4 83 aa12.99□□□□□ -0.33
DDX54-207ENST00000550016 AMTP48728 403 aa12.99□□□□□ -0.33
DDX54-207ENST00000550016 GAGE6Q13070 117 aa12.99□□□□□ -0.33
DDX54-207ENST00000550016 MPV17L2Q567V2 206 aa12.99□□□□□ -0.33
DDX54-207ENST00000550016 ATRAIDQ6UW56 229 aa12.99□□□□□ -0.33
DDX54-207ENST00000550016 NRACQ8N912 160 aa12.99□□□□□ -0.33
DDX54-207ENST00000550016 TMEM70Q9BUB7 260 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms