RNA–Protein interactions for RNA: ENST00000547259.1

HDAC7-226, Transcript of histone deacetylase 7, humanhuman

TSL 3

Gene HDAC7, Length 569 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-226ENST00000547259 SUMO4Q6EEV6 95 aa8.43□□□□□ -1.06
HDAC7-226ENST00000547259 UBE2DNLQ8IWF7 75 aa8.43□□□□□ -1.06
HDAC7-226ENST00000547259 AMN1Q8IY45 258 aa8.43□□□□□ -1.06
HDAC7-226ENST00000547259 GATD1Q8NB37 220 aa8.43□□□□□ -1.06
HDAC7-226ENST00000547259 FAT2Q9NYQ8 4349 aa8.43□□□□□ -1.06
HDAC7-226ENST00000547259 DNAH17Q9UFH2 4485 aa8.42□□□□□ -1.06
HDAC7-226ENST00000547259 TRBV24-1A0A075B6N3 115 aa8.42□□□□□ -1.06
HDAC7-226ENST00000547259 TRBV6-4A0A1B0GX49 114 aa8.42□□□□□ -1.06
HDAC7-226ENST00000547259 PAX4O43316 350 aa8.42□□□□□ -1.06
HDAC7-226ENST00000547259 LINC00315P59091 139 aa8.42□□□□□ -1.06
HDAC7-226ENST00000547259 COX19Q49B96 90 aa8.42□□□□□ -1.06
HDAC7-226ENST00000547259 Q6ZSN1 163 aa8.42□□□□□ -1.06
HDAC7-226ENST00000547259 SLC25A29Q8N8R3 303 aa8.42□□□□□ -1.06
HDAC7-226ENST00000547259 PRADC1Q9BSG0 188 aa8.42□□□□□ -1.06
HDAC7-226ENST00000547259 DNAH2Q9P225 4427 aa8.41□□□□□ -1.06
HDAC7-226ENST00000547259 TRAV26-2A0A0B4J265 109 aa8.41□□□□□ -1.06
HDAC7-226ENST00000547259 H7C1H1 209 aa8.41□□□□□ -1.06
HDAC7-226ENST00000547259 RAB4AP20338 218 aa8.41□□□□□ -1.06
HDAC7-226ENST00000547259 FAM104BQ5XKR9 115 aa8.41□□□□□ -1.06
HDAC7-226ENST00000547259 TMEM136Q6ZRR5 245 aa8.41□□□□□ -1.06
HDAC7-226ENST00000547259 RNF185Q96GF1 192 aa8.41□□□□□ -1.06
HDAC7-226ENST00000547259 YPEL4Q96NS1 127 aa8.41□□□□□ -1.06
HDAC7-226ENST00000547259 HLA-DQA1P01909 254 aa8.4□□□□□ -1.06
HDAC7-226ENST00000547259 GYPEP15421 78 aa8.4□□□□□ -1.06
HDAC7-226ENST00000547259 MRAP2Q96G30 205 aa8.4□□□□□ -1.06
HDAC7-226ENST00000547259 VSIG2Q96IQ7 327 aa8.4□□□□□ -1.06
HDAC7-226ENST00000547259 GNB1LQ9BYB4 327 aa8.4□□□□□ -1.06
HDAC7-226ENST00000547259 LOC100131303A0A0U1RQF7 123 aa8.39□□□□□ -1.07
HDAC7-226ENST00000547259 H3BNG1 76 aa8.39□□□□□ -1.07
HDAC7-226ENST00000547259 M0R2N4 97 aa8.39□□□□□ -1.07
HDAC7-226ENST00000547259 RTL8CO15255 209 aa8.39□□□□□ -1.07
HDAC7-226ENST00000547259 NCR2O95944 276 aa8.39□□□□□ -1.07
HDAC7-226ENST00000547259 MT-ND6P03923 174 aa8.39□□□□□ -1.07
HDAC7-226ENST00000547259 MRPL51Q4U2R6 128 aaKnown RBP8.39□□□□□ -1.07
HDAC7-226ENST00000547259 FRZBQ92765 325 aa8.39□□□□□ -1.07
HDAC7-226ENST00000547259 ICOSQ9Y6W8 199 aa8.39□□□□□ -1.07
HDAC7-226ENST00000547259 TRBV10-1A0A0K0K1A3 114 aa8.38□□□□□ -1.07
HDAC7-226ENST00000547259 GAGE12JA6NER3 117 aa8.38□□□□□ -1.07
HDAC7-226ENST00000547259 SMKR1H3BMG3 65 aa8.38□□□□□ -1.07
HDAC7-226ENST00000547259 M0QY20 66 aa8.38□□□□□ -1.07
HDAC7-226ENST00000547259 NUDT3O95989 172 aa8.38□□□□□ -1.07
HDAC7-226ENST00000547259 SRIP30626 198 aa8.38□□□□□ -1.07
HDAC7-226ENST00000547259 CKS2P33552 79 aa8.38□□□□□ -1.07
HDAC7-226ENST00000547259 RPL36AP83881 106 aaKnown RBP8.38□□□□□ -1.07
HDAC7-226ENST00000547259 GAGE1Q13065 139 aa8.38□□□□□ -1.07
HDAC7-226ENST00000547259 GAGE4Q13068 117 aa8.38□□□□□ -1.07
HDAC7-226ENST00000547259 GAGE5Q13069 117 aa8.38□□□□□ -1.07
HDAC7-226ENST00000547259 GAGE13Q4V321 117 aa8.38□□□□□ -1.07
HDAC7-226ENST00000547259 C15orf53Q8NAA6 179 aa8.38□□□□□ -1.07
HDAC7-226ENST00000547259 NEXN-AS1Q8NBZ9 246 aa8.38□□□□□ -1.07
HDAC7-226ENST00000547259 RPL36ALQ969Q0 106 aaKnown RBP8.38□□□□□ -1.07
HDAC7-226ENST00000547259 MRPL18Q9H0U6 180 aaKnown RBP8.38□□□□□ -1.07
HDAC7-226ENST00000547259 D6R8Y8 96 aa8.37□□□□□ -1.07
HDAC7-226ENST00000547259 APCSP02743 223 aa8.37□□□□□ -1.07
HDAC7-226ENST00000547259 OR10J3Q5JRS4 329 aa8.37□□□□□ -1.07
HDAC7-226ENST00000547259 C1orf134Q5TEV5 83 aa8.37□□□□□ -1.07
HDAC7-226ENST00000547259 Q6ZR54 194 aa8.37□□□□□ -1.07
HDAC7-226ENST00000547259 ZNRF2Q8NHG8 242 aa8.37□□□□□ -1.07
HDAC7-226ENST00000547259 RPL39LQ96EH5 51 aaKnown RBP8.37□□□□□ -1.07
HDAC7-226ENST00000547259 DNAJC30Q96LL9 226 aa8.37□□□□□ -1.07
HDAC7-226ENST00000547259 NIT2Q9NQR4 276 aa8.37□□□□□ -1.07
HDAC7-226ENST00000547259 TRAPPC1Q9Y5R8 145 aa8.37□□□□□ -1.07
HDAC7-226ENST00000547259 TNFRSF18Q9Y5U5 241 aa8.37□□□□□ -1.07
HDAC7-226ENST00000547259 PKD1P98161 4303 aa8.37□□□□□ -1.07
HDAC7-226ENST00000547259 A0A096LPF7 62 aa8.36□□□□□ -1.07
HDAC7-226ENST00000547259 PPBPP02775 128 aa8.36□□□□□ -1.07
HDAC7-226ENST00000547259 FABP9Q0Z7S8 132 aa8.36□□□□□ -1.07
HDAC7-226ENST00000547259 MRPL23Q16540 153 aaKnown RBP8.36□□□□□ -1.07
HDAC7-226ENST00000547259 ORMDL3Q8N138 153 aa8.36□□□□□ -1.07
HDAC7-226ENST00000547259 Q9UF83 564 aa8.36□□□□□ -1.07
HDAC7-226ENST00000547259 DNAH11Q96DT5 4516 aa8.35□□□□□ -1.07
HDAC7-226ENST00000547259 TRBV7-3A0A075B6L6 115 aa8.35□□□□□ -1.07
HDAC7-226ENST00000547259 COLCA2A8K830 154 aa8.35□□□□□ -1.07
HDAC7-226ENST00000547259 GAS8-AS1O95177 125 aa8.35□□□□□ -1.07
HDAC7-226ENST00000547259 PPP1R17O96001 155 aa8.35□□□□□ -1.07
HDAC7-226ENST00000547259 RPS10P46783 165 aaKnown RBP8.35□□□□□ -1.07
HDAC7-226ENST00000547259 KIAA1644Q3SXP7 199 aa8.35□□□□□ -1.07
HDAC7-226ENST00000547259 IGLV2-18A0A075B6J9 118 aa8.34□□□□□ -1.07
HDAC7-226ENST00000547259 LINC00694P0DN24 101 aa8.34□□□□□ -1.07
HDAC7-226ENST00000547259 RAB5AP20339 215 aa8.34□□□□□ -1.07
HDAC7-226ENST00000547259 SH2D6Q7Z4S9 175 aa8.34□□□□□ -1.07
HDAC7-226ENST00000547259 NRACQ8N912 160 aa8.34□□□□□ -1.07
HDAC7-226ENST00000547259 SREK1IP1Q8N9Q2 155 aaPredicted RBP8.34□□□□□ -1.07
HDAC7-226ENST00000547259 ATP6V0E2Q8NHE4 81 aa8.34□□□□□ -1.07
HDAC7-226ENST00000547259 PRELID3AQ96N28 172 aa8.34□□□□□ -1.07
HDAC7-226ENST00000547259 ST20Q9HBF5 79 aa8.34□□□□□ -1.07
HDAC7-226ENST00000547259 TNFRSF6BO95407 300 aa8.33□□□□□ -1.08
HDAC7-226ENST00000547259 NPYP01303 97 aa8.33□□□□□ -1.08
HDAC7-226ENST00000547259 UBE2D3P61077 147 aa8.33□□□□□ -1.08
HDAC7-226ENST00000547259 UBE2D2P62837 147 aa8.33□□□□□ -1.08
HDAC7-226ENST00000547259 NEGR1Q7Z3B1 354 aa8.33□□□□□ -1.08
HDAC7-226ENST00000547259 IGHV3-38A0A0C4DH36 116 aa8.32□□□□□ -1.08
HDAC7-226ENST00000547259 TRBV6-5A0A0K0K1A5 114 aa8.32□□□□□ -1.08
HDAC7-226ENST00000547259 SDHAF1A6NFY7 115 aa8.32□□□□□ -1.08
HDAC7-226ENST00000547259 SUMO2P61956 95 aaKnown RBP8.32□□□□□ -1.08
HDAC7-226ENST00000547259 LAMTOR2Q9Y2Q5 125 aa8.32□□□□□ -1.08
HDAC7-226ENST00000547259 DYNC1H1Q14204 4646 aaKnown RBP8.32□□□□□ -1.08
HDAC7-226ENST00000547259 PHOX2AO14813 284 aa8.31□□□□□ -1.08
HDAC7-226ENST00000547259 DAZ4Q86SG3 579 aaKnown RBP8.31□□□□□ -1.08
HDAC7-226ENST00000547259 C20orf78Q9BR46 151 aa8.31□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 126.2 ms