RNA–Protein interactions for RNA: ENST00000545998.1

HMGA2-211, Transcript of high mobility group AT-hook 2, humanhuman

TSL 1 (best)

Gene HMGA2, Length 1,584 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2-211ENST00000545998 UBE2D2P62837 147 aa14.04□□□□□ -0.16
HMGA2-211ENST00000545998 TMEM191AQ9H0A3 160 aa14.04□□□□□ -0.16
HMGA2-211ENST00000545998 H7C1H1 209 aa14.03□□□□□ -0.16
HMGA2-211ENST00000545998 RASL11AQ6T310 242 aa14.01□□□□□ -0.17
HMGA2-211ENST00000545998 GATD1Q8NB37 220 aa14.01□□□□□ -0.17
HMGA2-211ENST00000545998 TRAV26-2A0A0B4J265 109 aa14□□□□□ -0.17
HMGA2-211ENST00000545998 A0A1B0GW15 77 aa14□□□□□ -0.17
HMGA2-211ENST00000545998 LELP1Q5T871 98 aa14□□□□□ -0.17
HMGA2-211ENST00000545998 DNAJC30Q96LL9 226 aa14□□□□□ -0.17
HMGA2-211ENST00000545998 M0R2N4 97 aa14□□□□□ -0.17
HMGA2-211ENST00000545998 SIVA1O15304 175 aa14□□□□□ -0.17
HMGA2-211ENST00000545998 Q6ZR54 194 aa14□□□□□ -0.17
HMGA2-211ENST00000545998 NBDYA0A0U1RRE5 68 aa13.99□□□□□ -0.17
HMGA2-211ENST00000545998 A0A1B0GXF2 115 aa13.99□□□□□ -0.17
HMGA2-211ENST00000545998 MRPL54Q6P161 138 aaKnown RBP13.99□□□□□ -0.17
HMGA2-211ENST00000545998 WFDC10BQ8IUB3 73 aa13.99□□□□□ -0.17
HMGA2-211ENST00000545998 RNF185Q96GF1 192 aa13.99□□□□□ -0.17
HMGA2-211ENST00000545998 CTDSP1Q9GZU7 261 aa13.99□□□□□ -0.17
HMGA2-211ENST00000545998 NIT2Q9NQR4 276 aa13.99□□□□□ -0.17
HMGA2-211ENST00000545998 TNFRSF18Q9Y5U5 241 aa13.99□□□□□ -0.17
HMGA2-211ENST00000545998 CAMPP49913 170 aa13.98□□□□□ -0.17
HMGA2-211ENST00000545998 DNAH17Q9UFH2 4485 aa13.98□□□□□ -0.17
HMGA2-211ENST00000545998 A0A087WWC5 75 aa13.97□□□□□ -0.17
HMGA2-211ENST00000545998 RAB4AP20338 218 aa13.97□□□□□ -0.17
HMGA2-211ENST00000545998 HBBP68871 147 aa13.97□□□□□ -0.17
HMGA2-211ENST00000545998 OR10J3Q5JRS4 329 aa13.97□□□□□ -0.17
HMGA2-211ENST00000545998 ATP5L2Q7Z4Y8 100 aa13.97□□□□□ -0.17
HMGA2-211ENST00000545998 AMN1Q8IY45 258 aa13.97□□□□□ -0.17
HMGA2-211ENST00000545998 FRZBQ92765 325 aa13.97□□□□□ -0.17
HMGA2-211ENST00000545998 DAZ4Q86SG3 579 aaKnown RBP13.96□□□□□ -0.17
HMGA2-211ENST00000545998 CLRN3Q8NCR9 226 aa13.96□□□□□ -0.17
HMGA2-211ENST00000545998 IMMP2LQ96T52 175 aa13.96□□□□□ -0.17
HMGA2-211ENST00000545998 DAZ3Q9NR90 486 aaKnown RBP13.96□□□□□ -0.17
HMGA2-211ENST00000545998 TRAV8-6A0A0B4J262 113 aa13.96□□□□□ -0.18
HMGA2-211ENST00000545998 IGHV3-38A0A0C4DH36 116 aa13.96□□□□□ -0.18
HMGA2-211ENST00000545998 C7orf77A4D0Y5 90 aa13.96□□□□□ -0.18
HMGA2-211ENST00000545998 FAT2Q9NYQ8 4349 aa13.96□□□□□ -0.18
HMGA2-211ENST00000545998 S100A8P05109 93 aa13.95□□□□□ -0.18
HMGA2-211ENST00000545998 DNAH10OSP0CZ25 163 aa13.95□□□□□ -0.18
HMGA2-211ENST00000545998 RHEBQ15382 184 aa13.95□□□□□ -0.18
HMGA2-211ENST00000545998 FAM104BQ5XKR9 115 aa13.95□□□□□ -0.18
HMGA2-211ENST00000545998 SREK1IP1Q8N9Q2 155 aaPredicted RBP13.95□□□□□ -0.18
HMGA2-211ENST00000545998 RPL39LQ96EH5 51 aaKnown RBP13.95□□□□□ -0.18
HMGA2-211ENST00000545998 KRTAP1-5Q9BYS1 174 aa13.95□□□□□ -0.18
HMGA2-211ENST00000545998 GAS8-AS1O95177 125 aa13.94□□□□□ -0.18
HMGA2-211ENST00000545998 MRAP2Q96G30 205 aa13.94□□□□□ -0.18
HMGA2-211ENST00000545998 TMEM242Q9NWH2 141 aa13.94□□□□□ -0.18
HMGA2-211ENST00000545998 APOC3P02656 99 aa13.93□□□□□ -0.18
HMGA2-211ENST00000545998 TTC32Q5I0X7 151 aa13.93□□□□□ -0.18
HMGA2-211ENST00000545998 SLC7A5P1Q8MH63 180 aa13.93□□□□□ -0.18
HMGA2-211ENST00000545998 BTF3L4Q96K17 158 aa13.93□□□□□ -0.18
HMGA2-211ENST00000545998 TRBV6-8A0A0A6YYG3 113 aa13.92□□□□□ -0.18
HMGA2-211ENST00000545998 NDUFA5Q16718 116 aa13.92□□□□□ -0.18
HMGA2-211ENST00000545998 MRPL51Q4U2R6 128 aaKnown RBP13.92□□□□□ -0.18
HMGA2-211ENST00000545998 LINC01556Q5JQF7 62 aa13.92□□□□□ -0.18
HMGA2-211ENST00000545998 TRBV6-5A0A0K0K1A5 114 aa13.91□□□□□ -0.18
HMGA2-211ENST00000545998 TMEM97Q5BJF2 176 aa13.91□□□□□ -0.18
HMGA2-211ENST00000545998 KCNIP4Q6PIL6 250 aa13.91□□□□□ -0.18
HMGA2-211ENST00000545998 NTM-AS1Q6ZSK4 140 aa13.91□□□□□ -0.18
HMGA2-211ENST00000545998 SVBPQ8N300 66 aa13.91□□□□□ -0.18
HMGA2-211ENST00000545998 RPS10P5Q9NQ39 176 aa13.91□□□□□ -0.18
HMGA2-211ENST00000545998 SMKR1H3BMG3 65 aa13.9□□□□□ -0.18
HMGA2-211ENST00000545998 RPS10P46783 165 aaKnown RBP13.9□□□□□ -0.18
HMGA2-211ENST00000545998 NCR2O95944 276 aa13.89□□□□□ -0.19
HMGA2-211ENST00000545998 TRAV9-1A0A075B6T8 112 aa13.88□□□□□ -0.19
HMGA2-211ENST00000545998 TRAV9-2A0A087WT02 112 aa13.88□□□□□ -0.19
HMGA2-211ENST00000545998 K7EP13 123 aa13.88□□□□□ -0.19
HMGA2-211ENST00000545998 SNAPINO95295 136 aa13.88□□□□□ -0.19
HMGA2-211ENST00000545998 SDHAF1A6NFY7 115 aa13.88□□□□□ -0.19
HMGA2-211ENST00000545998 C1orf134Q5TEV5 83 aa13.88□□□□□ -0.19
HMGA2-211ENST00000545998 NRACQ8N912 160 aa13.88□□□□□ -0.19
HMGA2-211ENST00000545998 S100PP25815 95 aa13.87□□□□□ -0.19
HMGA2-211ENST00000545998 NIT1Q86X76 327 aa13.87□□□□□ -0.19
HMGA2-211ENST00000545998 Q8N3U1 123 aa13.87□□□□□ -0.19
HMGA2-211ENST00000545998 URGCP-MRPS24S4R325 110 aa13.87□□□□□ -0.19
HMGA2-211ENST00000545998 HECTD4Q9Y4D8 3996 aa13.86□□□□□ -0.19
HMGA2-211ENST00000545998 RTL8CO15255 209 aa13.86□□□□□ -0.19
HMGA2-211ENST00000545998 PPP1R17O96001 155 aa13.86□□□□□ -0.19
HMGA2-211ENST00000545998 IGHV3-30P01768 117 aa13.86□□□□□ -0.19
HMGA2-211ENST00000545998 IGHV3-33P01772 117 aa13.86□□□□□ -0.19
HMGA2-211ENST00000545998 IGHV3-30-3P0DP02 117 aa13.86□□□□□ -0.19
HMGA2-211ENST00000545998 IGHV3-30-5P0DP03 117 aa13.86□□□□□ -0.19
HMGA2-211ENST00000545998 IQCJQ1A5X6 159 aa13.86□□□□□ -0.19
HMGA2-211ENST00000545998 C6orf223Q8N319 242 aa13.86□□□□□ -0.19
HMGA2-211ENST00000545998 ST20Q9HBF5 79 aa13.86□□□□□ -0.19
HMGA2-211ENST00000545998 TRBV25-1A0A075B6N4 114 aa13.85□□□□□ -0.19
HMGA2-211ENST00000545998 BTF3P20290 206 aaKnown RBP13.85□□□□□ -0.19
HMGA2-211ENST00000545998 CKS2P33552 79 aa13.85□□□□□ -0.19
HMGA2-211ENST00000545998 C10orf126Q8N4M7 172 aa13.85□□□□□ -0.19
HMGA2-211ENST00000545998 TMEM70Q9BUB7 260 aa13.85□□□□□ -0.19
HMGA2-211ENST00000545998 IGHV1-24A0A0C4DH33 117 aa13.84□□□□□ -0.19
HMGA2-211ENST00000545998 POLR2KP53803 58 aaKnown RBP13.84□□□□□ -0.19
HMGA2-211ENST00000545998 COTL1Q14019 142 aa13.84□□□□□ -0.19
HMGA2-211ENST00000545998 DEFB104AQ8WTQ1 72 aa13.84□□□□□ -0.19
HMGA2-211ENST00000545998 D6R8Y8 96 aa13.83□□□□□ -0.19
HMGA2-211ENST00000545998 CHCHD5Q9BSY4 110 aa13.83□□□□□ -0.19
HMGA2-211ENST00000545998 TRBV24-1A0A075B6N3 115 aa13.83□□□□□ -0.2
HMGA2-211ENST00000545998 TMEM136Q6ZRR5 245 aa13.83□□□□□ -0.2
HMGA2-211ENST00000545998 CHCHD7Q9BUK0 85 aa13.83□□□□□ -0.2
HMGA2-211ENST00000545998 PKD1P98161 4303 aa13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 98.2 ms