RNA–Protein interactions for RNA: ENST00000545450.6

MSLN-202, Transcript of mesothelin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MSLN, Length 2,162 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSLN-202ENST00000545450 A0A087WW49 117 aa14.05□□□□□ -0.16
MSLN-202ENST00000545450 IGHV3-11P01762 117 aa14.05□□□□□ -0.16
MSLN-202ENST00000545450 LINC00315P59091 139 aa14.05□□□□□ -0.16
MSLN-202ENST00000545450 HERVK_113P61574 105 aa14.05□□□□□ -0.16
MSLN-202ENST00000545450 KRTAP1-1Q07627 177 aa14.05□□□□□ -0.16
MSLN-202ENST00000545450 USMG5Q96IX5 58 aa14.05□□□□□ -0.16
MSLN-202ENST00000545450 RNASE4P34096 147 aaKnown RBP14.04□□□□□ -0.16
MSLN-202ENST00000545450 KIF25-AS1Q9Y6Z4 181 aa14.04□□□□□ -0.16
MSLN-202ENST00000545450 ARL3P36405 182 aa14.03□□□□□ -0.16
MSLN-202ENST00000545450 DEFB1P60022 68 aa14.03□□□□□ -0.16
MSLN-202ENST00000545450 PMVKQ15126 192 aa14.03□□□□□ -0.16
MSLN-202ENST00000545450 SFTA2Q6UW10 78 aa14.03□□□□□ -0.16
MSLN-202ENST00000545450 C10orf99Q6UWK7 81 aa14.03□□□□□ -0.16
MSLN-202ENST00000545450 UNQ9165/PRO28630Q6UXU0 137 aa14.03□□□□□ -0.16
MSLN-202ENST00000545450 DUX5Q96PT3 197 aa14.03□□□□□ -0.16
MSLN-202ENST00000545450 FHL3Q13643 280 aa14.03□□□□□ -0.16
MSLN-202ENST00000545450 TP53TG1Q9Y2A0 90 aa14.03□□□□□ -0.16
MSLN-202ENST00000545450 CUBNO60494 3623 aa14.02□□□□□ -0.16
MSLN-202ENST00000545450 TRBV7-9A0A0J9YWB2 115 aa14.02□□□□□ -0.16
MSLN-202ENST00000545450 SBSPONQ8IVN8 264 aa14.02□□□□□ -0.16
MSLN-202ENST00000545450 ZNF418Q8TF45 676 aaPredicted RBP14.02□□□□□ -0.16
MSLN-202ENST00000545450 CARD19Q96LW7 228 aa14.02□□□□□ -0.16
MSLN-202ENST00000545450 ZNF702PQ9H963 129 aa14.02□□□□□ -0.16
MSLN-202ENST00000545450 TRBV20-1A0A075B6N2 111 aa14.02□□□□□ -0.17
MSLN-202ENST00000545450 IGHV3-30P01768 117 aa14.02□□□□□ -0.17
MSLN-202ENST00000545450 IGHV3-30-5P0DP03 117 aa14.02□□□□□ -0.17
MSLN-202ENST00000545450 CRYBA4P53673 196 aa14.02□□□□□ -0.17
MSLN-202ENST00000545450 POLR2KP53803 58 aaKnown RBP14.02□□□□□ -0.17
MSLN-202ENST00000545450 TEN1Q86WV5 123 aa14.02□□□□□ -0.17
MSLN-202ENST00000545450 PPDPFLQ8WWR9 84 aa14.02□□□□□ -0.17
MSLN-202ENST00000545450 PTH2Q96A98 100 aa14.02□□□□□ -0.17
MSLN-202ENST00000545450 TMEM141Q96I45 108 aa14.02□□□□□ -0.17
MSLN-202ENST00000545450 MYO9AB2RTY4 2548 aa14.01□□□□□ -0.17
MSLN-202ENST00000545450 CFC1BP0CG36 223 aa14.01□□□□□ -0.17
MSLN-202ENST00000545450 CFC1P0CG37 223 aa14.01□□□□□ -0.17
MSLN-202ENST00000545450 PSMB8P28062 276 aa14.01□□□□□ -0.17
MSLN-202ENST00000545450 SLC25A29Q8N8R3 303 aa14.01□□□□□ -0.17
MSLN-202ENST00000545450 ANK3Q12955 4377 aaKnown RBP14.01□□□□□ -0.17
MSLN-202ENST00000545450 NDUFA4O00483 81 aa14□□□□□ -0.17
MSLN-202ENST00000545450 TCL1BO95988 128 aa14□□□□□ -0.17
MSLN-202ENST00000545450 SPINK8P0C7L1 97 aa14□□□□□ -0.17
MSLN-202ENST00000545450 EMP1P54849 157 aa14□□□□□ -0.17
MSLN-202ENST00000545450 TIMM17AQ99595 171 aa14□□□□□ -0.17
MSLN-202ENST00000545450 F6UB75 175 aa13.99□□□□□ -0.17
MSLN-202ENST00000545450 TSPEAR-AS2P59090 65 aa13.99□□□□□ -0.17
MSLN-202ENST00000545450 MT-ATP8P03928 68 aa13.99□□□□□ -0.17
MSLN-202ENST00000545450 Q6ZUT4 128 aa13.99□□□□□ -0.17
MSLN-202ENST00000545450 C10orf126Q8N4M7 172 aa13.99□□□□□ -0.17
MSLN-202ENST00000545450 AMELXQ99217 191 aa13.99□□□□□ -0.17
MSLN-202ENST00000545450 VCX2Q9H322 139 aa13.99□□□□□ -0.17
MSLN-202ENST00000545450 VCYO14598 125 aa13.98□□□□□ -0.17
MSLN-202ENST00000545450 XGP55808 180 aa13.98□□□□□ -0.17
MSLN-202ENST00000545450 RPL39P62891 51 aaKnown RBP13.98□□□□□ -0.17
MSLN-202ENST00000545450 ZNF876PQ49A33 203 aa13.98□□□□□ -0.17
MSLN-202ENST00000545450 SUMO4Q6EEV6 95 aa13.98□□□□□ -0.17
MSLN-202ENST00000545450 GEMIN7Q9H840 131 aaKnown RBP13.98□□□□□ -0.17
MSLN-202ENST00000545450 TEX29Q8N6K0 151 aa13.97□□□□□ -0.17
MSLN-202ENST00000545450 ZNRF2Q8NHG8 242 aa13.97□□□□□ -0.17
MSLN-202ENST00000545450 A8MWV9 139 aa13.96□□□□□ -0.17
MSLN-202ENST00000545450 CLUHP3Q96NS8 147 aa13.96□□□□□ -0.17
MSLN-202ENST00000545450 KIR2DL4Q99706 377 aa13.96□□□□□ -0.17
MSLN-202ENST00000545450 TMEM170BQ5T4T1 132 aa13.96□□□□□ -0.18
MSLN-202ENST00000545450 PRO1854Q9UHT4 67 aa13.96□□□□□ -0.18
MSLN-202ENST00000545450 TRAV26-1A0A087WT03 109 aa13.95□□□□□ -0.18
MSLN-202ENST00000545450 KLLNB2CW77 178 aa13.95□□□□□ -0.18
MSLN-202ENST00000545450 JPT2Q9H910 190 aa13.95□□□□□ -0.18
MSLN-202ENST00000545450 YAE1D1Q9NRH1 226 aa13.95□□□□□ -0.18
MSLN-202ENST00000545450 TMEM89A2RUT3 159 aa13.95□□□□□ -0.18
MSLN-202ENST00000545450 RPL11P62913 178 aaKnown RBP13.95□□□□□ -0.18
MSLN-202ENST00000545450 NF1P21359 2839 aa13.94□□□□□ -0.18
MSLN-202ENST00000545450 TRBV27A0A0K0K1C4 114 aa13.94□□□□□ -0.18
MSLN-202ENST00000545450 J3QQQ9 107 aa13.94□□□□□ -0.18
MSLN-202ENST00000545450 DEFB104AQ8WTQ1 72 aa13.94□□□□□ -0.18
MSLN-202ENST00000545450 MUC4Q99102 2169 aa13.94□□□□□ -0.18
MSLN-202ENST00000545450 SDHAF1A6NFY7 115 aa13.93□□□□□ -0.18
MSLN-202ENST00000545450 Q8N2B8 174 aa13.93□□□□□ -0.18
MSLN-202ENST00000545450 NOTCH2Q04721 2471 aa13.93□□□□□ -0.18
MSLN-202ENST00000545450 MTORP42345 2549 aa13.93□□□□□ -0.18
MSLN-202ENST00000545450 TRBV6-5A0A0K0K1A5 114 aa13.93□□□□□ -0.18
MSLN-202ENST00000545450 ZNF688P0C7X2 276 aa13.93□□□□□ -0.18
MSLN-202ENST00000545450 TMEM86BQ8N661 226 aa13.93□□□□□ -0.18
MSLN-202ENST00000545450 WFDC12Q8WWY7 111 aa13.93□□□□□ -0.18
MSLN-202ENST00000545450 FAM159AQ6UWV7 190 aa13.92□□□□□ -0.18
MSLN-202ENST00000545450 ANKRD29Q8N6D5 301 aa13.92□□□□□ -0.18
MSLN-202ENST00000545450 A0A087WWL8 130 aa13.92□□□□□ -0.18
MSLN-202ENST00000545450 DNAJC9-AS1A6NH13 148 aa13.92□□□□□ -0.18
MSLN-202ENST00000545450 LGALS9O00182 355 aa13.92□□□□□ -0.18
MSLN-202ENST00000545450 SCGB1C2P0DMR2 95 aa13.92□□□□□ -0.18
MSLN-202ENST00000545450 M0QXV9 152 aa13.91□□□□□ -0.18
MSLN-202ENST00000545450 LGALS3P17931 250 aaKnown RBP13.91□□□□□ -0.18
MSLN-202ENST00000545450 RHPN1-AS1Q9BWJ2 59 aa13.91□□□□□ -0.18
MSLN-202ENST00000545450 ESM1Q9NQ30 184 aa13.91□□□□□ -0.18
MSLN-202ENST00000545450 OTOGQ6ZRI0 2925 aa13.91□□□□□ -0.18
MSLN-202ENST00000545450 IGKV3-7A0A075B6H7 116 aa13.9□□□□□ -0.18
MSLN-202ENST00000545450 ELANEP08246 267 aa13.9□□□□□ -0.18
MSLN-202ENST00000545450 F5H697 171 aa13.9□□□□□ -0.18
MSLN-202ENST00000545450 A4D1N5 150 aa13.89□□□□□ -0.19
MSLN-202ENST00000545450 TMEM223A0PJW6 202 aa13.89□□□□□ -0.19
MSLN-202ENST00000545450 TMEM262E9PQX1 116 aa13.89□□□□□ -0.19
MSLN-202ENST00000545450 LEPROTO15243 131 aa13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms