RNA–Protein interactions for RNA: ENST00000544454.5

LTBR-213, Transcript of lymphotoxin beta receptor, humanhuman

TSL 5

Gene LTBR, Length 632 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-213ENST00000544454 OR10J3Q5JRS4 329 aa9.34□□□□□ -0.91
LTBR-213ENST00000544454 SMIM15Q7Z3B0 74 aa9.34□□□□□ -0.91
LTBR-213ENST00000544454 WFDC10BQ8IUB3 73 aa9.34□□□□□ -0.91
LTBR-213ENST00000544454 C6orf223Q8N319 242 aa9.34□□□□□ -0.91
LTBR-213ENST00000544454 KRTAP1-5Q9BYS1 174 aa9.34□□□□□ -0.91
LTBR-213ENST00000544454 FAT2Q9NYQ8 4349 aa9.34□□□□□ -0.91
LTBR-213ENST00000544454 IGHV3-38A0A0C4DH36 116 aa9.33□□□□□ -0.92
LTBR-213ENST00000544454 A0A1B0GUT8 65 aa9.33□□□□□ -0.92
LTBR-213ENST00000544454 MGPP08493 103 aa9.33□□□□□ -0.92
LTBR-213ENST00000544454 UQCC3Q6UW78 93 aa9.33□□□□□ -0.92
LTBR-213ENST00000544454 NEXN-AS1Q8NBZ9 246 aa9.33□□□□□ -0.92
LTBR-213ENST00000544454 DNAJC30Q96LL9 226 aa9.33□□□□□ -0.92
LTBR-213ENST00000544454 PNRC1Q12796 327 aaPredicted RBP9.32□□□□□ -0.92
LTBR-213ENST00000544454 SUMO4Q6EEV6 95 aa9.32□□□□□ -0.92
LTBR-213ENST00000544454 SREK1IP1Q8N9Q2 155 aaPredicted RBP9.32□□□□□ -0.92
LTBR-213ENST00000544454 NAT8BQ9UHF3 227 aa9.32□□□□□ -0.92
LTBR-213ENST00000544454 SMIM27A0A1W2PRY6 76 aa9.31□□□□□ -0.92
LTBR-213ENST00000544454 LINC01556Q5JQF7 62 aa9.31□□□□□ -0.92
LTBR-213ENST00000544454 RASL11AQ6T310 242 aa9.31□□□□□ -0.92
LTBR-213ENST00000544454 DAZ4Q86SG3 579 aaKnown RBP9.31□□□□□ -0.92
LTBR-213ENST00000544454 NUP35Q8NFH5 326 aa9.31□□□□□ -0.92
LTBR-213ENST00000544454 FRZBQ92765 325 aa9.31□□□□□ -0.92
LTBR-213ENST00000544454 DAZ3Q9NR90 486 aaKnown RBP9.31□□□□□ -0.92
LTBR-213ENST00000544454 TNFRSF18Q9Y5U5 241 aa9.31□□□□□ -0.92
LTBR-213ENST00000544454 PPP1R2P9O14990 202 aa9.3□□□□□ -0.92
LTBR-213ENST00000544454 RIGQ13278 110 aa9.3□□□□□ -0.92
LTBR-213ENST00000544454 C10orf126Q8N4M7 172 aa9.3□□□□□ -0.92
LTBR-213ENST00000544454 NIT2Q9NQR4 276 aa9.3□□□□□ -0.92
LTBR-213ENST00000544454 TMEM218A2RU14 115 aa9.29□□□□□ -0.92
LTBR-213ENST00000544454 PRSS29PA6NIE9 313 aa9.29□□□□□ -0.92
LTBR-213ENST00000544454 TMEM97Q5BJF2 176 aa9.29□□□□□ -0.92
LTBR-213ENST00000544454 GATD1Q8NB37 220 aa9.29□□□□□ -0.92
LTBR-213ENST00000544454 TMEM191AQ9H0A3 160 aa9.29□□□□□ -0.92
LTBR-213ENST00000544454 TRBV6-8A0A0A6YYG3 113 aa9.28□□□□□ -0.92
LTBR-213ENST00000544454 NFE4Q86UQ8 179 aa9.28□□□□□ -0.92
LTBR-213ENST00000544454 A0A1B0GW15 77 aa9.27□□□□□ -0.93
LTBR-213ENST00000544454 LINC00862A6NCI5 91 aa9.27□□□□□ -0.93
LTBR-213ENST00000544454 MT-ND4LP03901 98 aa9.27□□□□□ -0.93
LTBR-213ENST00000544454 HECTD4Q9Y4D8 3996 aa9.27□□□□□ -0.93
LTBR-213ENST00000544454 IBA57-AS1B1ANH7 110 aa9.26□□□□□ -0.93
LTBR-213ENST00000544454 COMMD7Q86VX2 200 aa9.26□□□□□ -0.93
LTBR-213ENST00000544454 NIT1Q86X76 327 aa9.26□□□□□ -0.93
LTBR-213ENST00000544454 ANAPC16Q96DE5 110 aa9.26□□□□□ -0.93
LTBR-213ENST00000544454 PKD1P98161 4303 aa9.26□□□□□ -0.93
LTBR-213ENST00000544454 TRAV26-2A0A0B4J265 109 aa9.25□□□□□ -0.93
LTBR-213ENST00000544454 F8W036 122 aa9.25□□□□□ -0.93
LTBR-213ENST00000544454 IGHV3-30P01768 117 aa9.25□□□□□ -0.93
LTBR-213ENST00000544454 IGHV3-33P01772 117 aa9.25□□□□□ -0.93
LTBR-213ENST00000544454 IGHV3-30-3P0DP02 117 aa9.25□□□□□ -0.93
LTBR-213ENST00000544454 IGHV3-30-5P0DP03 117 aa9.25□□□□□ -0.93
LTBR-213ENST00000544454 KCNIP4Q6PIL6 250 aa9.25□□□□□ -0.93
LTBR-213ENST00000544454 CHCHD7Q9BUK0 85 aa9.25□□□□□ -0.93
LTBR-213ENST00000544454 SEC11CQ9BY50 192 aa9.25□□□□□ -0.93
LTBR-213ENST00000544454 URGCP-MRPS24S4R325 110 aa9.25□□□□□ -0.93
LTBR-213ENST00000544454 A0A1B0GVY2 172 aa9.24□□□□□ -0.93
LTBR-213ENST00000544454 ADCYAP1P18509 176 aa9.24□□□□□ -0.93
LTBR-213ENST00000544454 RAB4AP20338 218 aa9.24□□□□□ -0.93
LTBR-213ENST00000544454 TNP2Q05952 138 aa9.24□□□□□ -0.93
LTBR-213ENST00000544454 Q6ZRN7 208 aaPredicted RBP9.24□□□□□ -0.93
LTBR-213ENST00000544454 NTM-AS1Q6ZSK4 140 aa9.24□□□□□ -0.93
LTBR-213ENST00000544454 RNF185Q96GF1 192 aa9.24□□□□□ -0.93
LTBR-213ENST00000544454 TRBV25-1A0A075B6N4 114 aa9.23□□□□□ -0.93
LTBR-213ENST00000544454 A0A087WX48 190 aa9.23□□□□□ -0.93
LTBR-213ENST00000544454 TRBV6-5A0A0K0K1A5 114 aa9.23□□□□□ -0.93
LTBR-213ENST00000544454 TMEM262E9PQX1 116 aa9.23□□□□□ -0.93
LTBR-213ENST00000544454 S100A8P05109 93 aa9.23□□□□□ -0.93
LTBR-213ENST00000544454 CAMPP49913 170 aa9.23□□□□□ -0.93
LTBR-213ENST00000544454 PKIAP61925 76 aa9.23□□□□□ -0.93
LTBR-213ENST00000544454 LAGE3Q14657 143 aa9.23□□□□□ -0.93
LTBR-213ENST00000544454 IQCJQ1A5X6 159 aa9.23□□□□□ -0.93
LTBR-213ENST00000544454 AMN1Q8IY45 258 aa9.23□□□□□ -0.93
LTBR-213ENST00000544454 MRAP2Q96G30 205 aa9.23□□□□□ -0.93
LTBR-213ENST00000544454 IGHV1-24A0A0C4DH33 117 aa9.22□□□□□ -0.93
LTBR-213ENST00000544454 HBBP68871 147 aa9.22□□□□□ -0.93
LTBR-213ENST00000544454 ELOBQ15370 118 aa9.22□□□□□ -0.93
LTBR-213ENST00000544454 FAM104BQ5XKR9 115 aa9.22□□□□□ -0.93
LTBR-213ENST00000544454 ATP5L2Q7Z4Y8 100 aa9.22□□□□□ -0.93
LTBR-213ENST00000544454 Q8N3U1 123 aa9.22□□□□□ -0.93
LTBR-213ENST00000544454 RPL39LQ96EH5 51 aaKnown RBP9.22□□□□□ -0.93
LTBR-213ENST00000544454 CHCHD5Q9BSY4 110 aa9.22□□□□□ -0.93
LTBR-213ENST00000544454 DNAH11Q96DT5 4516 aa9.21□□□□□ -0.93
LTBR-213ENST00000544454 TRAV8-3A0A0A6YYJ7 113 aa9.21□□□□□ -0.94
LTBR-213ENST00000544454 A0A1B0GXF2 115 aa9.21□□□□□ -0.94
LTBR-213ENST00000544454 PPP1R17O96001 155 aa9.21□□□□□ -0.94
LTBR-213ENST00000544454 COTL1Q14019 142 aa9.21□□□□□ -0.94
LTBR-213ENST00000544454 C10orf91Q5T1B1 145 aa9.21□□□□□ -0.94
LTBR-213ENST00000544454 SDHAF1A6NFY7 115 aa9.2□□□□□ -0.94
LTBR-213ENST00000544454 MRPL54Q6P161 138 aaKnown RBP9.2□□□□□ -0.94
LTBR-213ENST00000544454 IMMP2LQ96T52 175 aa9.2□□□□□ -0.94
LTBR-213ENST00000544454 CTDSP1Q9GZU7 261 aa9.2□□□□□ -0.94
LTBR-213ENST00000544454 ST20Q9HBF5 79 aa9.2□□□□□ -0.94
LTBR-213ENST00000544454 BIRC6Q9NR09 4857 aa9.19□□□□□ -0.94
LTBR-213ENST00000544454 GAS8-AS1O95177 125 aa9.19□□□□□ -0.94
LTBR-213ENST00000544454 NCR2O95944 276 aa9.19□□□□□ -0.94
LTBR-213ENST00000544454 MRPL51Q4U2R6 128 aaKnown RBP9.19□□□□□ -0.94
LTBR-213ENST00000544454 TMEM243Q9BU79 118 aa9.19□□□□□ -0.94
LTBR-213ENST00000544454 Q9HAA7 133 aa9.19□□□□□ -0.94
LTBR-213ENST00000544454 KLK12Q9UKR0 248 aa9.19□□□□□ -0.94
LTBR-213ENST00000544454 I3L3M4 83 aa9.18□□□□□ -0.94
LTBR-213ENST00000544454 AMTP48728 403 aa9.18□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 83.1 ms