RNA–Protein interactions for RNA: ENST00000543982.5

XRCC1-202, Transcript of X-ray repair cross complementing 1, humanhuman

TSL 2 BASIC

Gene XRCC1, Length 1,994 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC1-202ENST00000543982 FAM222AQ5U5X8 452 aa11.34□□□□□ -0.59
XRCC1-202ENST00000543982 Q9UF83 564 aa11.34□□□□□ -0.59
XRCC1-202ENST00000543982 PRKDCP78527 4128 aaKnown RBP11.34□□□□□ -0.59
XRCC1-202ENST00000543982 PPP1R17O96001 155 aa11.34□□□□□ -0.59
XRCC1-202ENST00000543982 DEFA6Q01524 100 aa11.34□□□□□ -0.59
XRCC1-202ENST00000543982 ZNF479Q96JC4 524 aa11.34□□□□□ -0.59
XRCC1-202ENST00000543982 A8MWV9 139 aa11.33□□□□□ -0.6
XRCC1-202ENST00000543982 RS1O15537 224 aa11.33□□□□□ -0.6
XRCC1-202ENST00000543982 DEFB130BP0DP73 79 aa11.33□□□□□ -0.6
XRCC1-202ENST00000543982 DEFB130AP0DP74 79 aa11.33□□□□□ -0.6
XRCC1-202ENST00000543982 LINC01546A6NGU7 62 aa11.32□□□□□ -0.6
XRCC1-202ENST00000543982 F5H697 171 aa11.32□□□□□ -0.6
XRCC1-202ENST00000543982 LGALS9BQ3B8N2 356 aa11.32□□□□□ -0.6
XRCC1-202ENST00000543982 LINC00612Q8N6U2 182 aa11.32□□□□□ -0.6
XRCC1-202ENST00000543982 C20orf78Q9BR46 151 aa11.32□□□□□ -0.6
XRCC1-202ENST00000543982 NDUFAF3Q9BU61 184 aa11.32□□□□□ -0.6
XRCC1-202ENST00000543982 DKK2Q9UBU2 259 aa11.32□□□□□ -0.6
XRCC1-202ENST00000543982 IGLV2-18A0A075B6J9 118 aa11.32□□□□□ -0.6
XRCC1-202ENST00000543982 CTAG1AP78358 180 aa11.32□□□□□ -0.6
XRCC1-202ENST00000543982 SUMO4Q6EEV6 95 aa11.32□□□□□ -0.6
XRCC1-202ENST00000543982 Q8N8P6 123 aa11.32□□□□□ -0.6
XRCC1-202ENST00000543982 COL7A1Q02388 2944 aa11.31□□□□□ -0.6
XRCC1-202ENST00000543982 SUMO2P61956 95 aaKnown RBP11.31□□□□□ -0.6
XRCC1-202ENST00000543982 ZNF56Q15929 161 aa11.31□□□□□ -0.6
XRCC1-202ENST00000543982 RPL39LQ96EH5 51 aaKnown RBP11.31□□□□□ -0.6
XRCC1-202ENST00000543982 LEPROTL1O95214 131 aa11.3□□□□□ -0.6
XRCC1-202ENST00000543982 P0DMU3 169 aa11.3□□□□□ -0.6
XRCC1-202ENST00000543982 FAM231AP0DMU4 169 aa11.3□□□□□ -0.6
XRCC1-202ENST00000543982 FAM231CP0DMU5 169 aa11.3□□□□□ -0.6
XRCC1-202ENST00000543982 SMIM2Q9BVW6 85 aa11.3□□□□□ -0.6
XRCC1-202ENST00000543982 NIT2Q9NQR4 276 aa11.3□□□□□ -0.6
XRCC1-202ENST00000543982 NACAE9PAV3 2078 aa11.3□□□□□ -0.6
XRCC1-202ENST00000543982 A0A0J9YWU9 116 aa11.29□□□□□ -0.6
XRCC1-202ENST00000543982 M0QY20 66 aa11.29□□□□□ -0.6
XRCC1-202ENST00000543982 KRTDAPP60985 99 aa11.29□□□□□ -0.6
XRCC1-202ENST00000543982 TRGV2A0A075B6R0 118 aa11.28□□□□□ -0.6
XRCC1-202ENST00000543982 A0A096LNJ9 63 aa11.28□□□□□ -0.6
XRCC1-202ENST00000543982 C3orf79P0CE67 100 aa11.28□□□□□ -0.6
XRCC1-202ENST00000543982 OR4C5Q8NGB2 326 aa11.28□□□□□ -0.6
XRCC1-202ENST00000543982 SPATA25Q9BR10 227 aa11.28□□□□□ -0.6
XRCC1-202ENST00000543982 SCGB1D1O95968 90 aa11.28□□□□□ -0.6
XRCC1-202ENST00000543982 TRAV4A0A0B4J268 109 aa11.27□□□□□ -0.61
XRCC1-202ENST00000543982 TRBV6-5A0A0K0K1A5 114 aa11.27□□□□□ -0.61
XRCC1-202ENST00000543982 LYRM9A8MSI8 78 aa11.27□□□□□ -0.61
XRCC1-202ENST00000543982 RHODO00212 210 aa11.27□□□□□ -0.61
XRCC1-202ENST00000543982 CDPF1Q6NVV7 123 aa11.27□□□□□ -0.61
XRCC1-202ENST00000543982 B9D2Q9BPU9 175 aa11.27□□□□□ -0.61
XRCC1-202ENST00000543982 EDA2RQ9HAV5 297 aa11.27□□□□□ -0.61
XRCC1-202ENST00000543982 ST20Q9HBF5 79 aa11.27□□□□□ -0.61
XRCC1-202ENST00000543982 HSPB8Q9UJY1 196 aa11.27□□□□□ -0.61
XRCC1-202ENST00000543982 HBDP02042 147 aa11.27□□□□□ -0.61
XRCC1-202ENST00000543982 RPL32P62910 135 aaKnown RBP11.27□□□□□ -0.61
XRCC1-202ENST00000543982 H7C1H1 209 aa11.26□□□□□ -0.61
XRCC1-202ENST00000543982 K7EMI3 77 aa11.26□□□□□ -0.61
XRCC1-202ENST00000543982 BTF3P20290 206 aaKnown RBP11.26□□□□□ -0.61
XRCC1-202ENST00000543982 FCER1GP30273 86 aa11.26□□□□□ -0.61
XRCC1-202ENST00000543982 FHL2Q14192 279 aa11.26□□□□□ -0.61
XRCC1-202ENST00000543982 LAGE3Q14657 143 aa11.26□□□□□ -0.61
XRCC1-202ENST00000543982 C12orf74Q32Q52 190 aa11.26□□□□□ -0.61
XRCC1-202ENST00000543982 POLR2KP53803 58 aaKnown RBP11.25□□□□□ -0.61
XRCC1-202ENST00000543982 ZFP2Q6ZN57 461 aa11.25□□□□□ -0.61
XRCC1-202ENST00000543982 LINC00173Q6ZV60 143 aa11.25□□□□□ -0.61
XRCC1-202ENST00000543982 DEFB104AQ8WTQ1 72 aa11.25□□□□□ -0.61
XRCC1-202ENST00000543982 TMEM70Q9BUB7 260 aa11.25□□□□□ -0.61
XRCC1-202ENST00000543982 TCAPO15273 167 aa11.25□□□□□ -0.61
XRCC1-202ENST00000543982 SPART-AS1P0CW21 52 aa11.25□□□□□ -0.61
XRCC1-202ENST00000543982 C11orf68Q9H3H3 251 aaKnown RBP11.25□□□□□ -0.61
XRCC1-202ENST00000543982 FBN3Q75N90 2809 aa11.24□□□□□ -0.61
XRCC1-202ENST00000543982 C18orf15Q96N68 181 aa11.24□□□□□ -0.61
XRCC1-202ENST00000543982 SDHAF1A6NFY7 115 aa11.23□□□□□ -0.61
XRCC1-202ENST00000543982 VCYO14598 125 aa11.23□□□□□ -0.61
XRCC1-202ENST00000543982 DAD1P61803 113 aa11.23□□□□□ -0.61
XRCC1-202ENST00000543982 Q8N976 141 aa11.23□□□□□ -0.61
XRCC1-202ENST00000543982 MAP1LC3CQ9BXW4 147 aa11.23□□□□□ -0.61
XRCC1-202ENST00000543982 TRBV27A0A0K0K1C4 114 aa11.23□□□□□ -0.61
XRCC1-202ENST00000543982 LOC100131303A0A0U1RQF7 123 aa11.23□□□□□ -0.61
XRCC1-202ENST00000543982 ORMDL2Q53FV1 153 aa11.23□□□□□ -0.61
XRCC1-202ENST00000543982 NEGR1Q7Z3B1 354 aa11.23□□□□□ -0.61
XRCC1-202ENST00000543982 SLC25A29Q8N8R3 303 aa11.23□□□□□ -0.61
XRCC1-202ENST00000543982 STAB2Q8WWQ8 2551 aa11.22□□□□□ -0.61
XRCC1-202ENST00000543982 SYS1-DBNDD2H3BUS1 97 aa11.22□□□□□ -0.61
XRCC1-202ENST00000543982 NANOS2P60321 138 aaKnown RBP11.21□□□□□ -0.61
XRCC1-202ENST00000543982 S100A12P80511 92 aa11.21□□□□□ -0.61
XRCC1-202ENST00000543982 KIR2DL4Q99706 377 aa11.21□□□□□ -0.61
XRCC1-202ENST00000543982 ZMAT4Q9H898 229 aa11.21□□□□□ -0.62
XRCC1-202ENST00000543982 TRGV4A0A0C4DH28 118 aa11.2□□□□□ -0.62
XRCC1-202ENST00000543982 NUDT3O95989 172 aa11.2□□□□□ -0.62
XRCC1-202ENST00000543982 Q6ZTC4 211 aa11.2□□□□□ -0.62
XRCC1-202ENST00000543982 NEXN-AS1Q8NBZ9 246 aa11.2□□□□□ -0.62
XRCC1-202ENST00000543982 PET117Q6UWS5 81 aa11.19□□□□□ -0.62
XRCC1-202ENST00000543982 TEX43Q6ZNM6 134 aa11.19□□□□□ -0.62
XRCC1-202ENST00000543982 SPATA12Q7Z6I5 190 aa11.19□□□□□ -0.62
XRCC1-202ENST00000543982 CIDEAO60543 219 aa11.19□□□□□ -0.62
XRCC1-202ENST00000543982 HTN3P15516 51 aa11.19□□□□□ -0.62
XRCC1-202ENST00000543982 IFI27L1Q96BM0 104 aa11.19□□□□□ -0.62
XRCC1-202ENST00000543982 VSIG2Q96IQ7 327 aa11.18□□□□□ -0.62
XRCC1-202ENST00000543982 HHLA3Q9XRX5 114 aa11.18□□□□□ -0.62
XRCC1-202ENST00000543982 TNFRSF18Q9Y5U5 241 aa11.18□□□□□ -0.62
XRCC1-202ENST00000543982 K7EQD1 137 aa11.17□□□□□ -0.62
XRCC1-202ENST00000543982 G0S2P27469 103 aa11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 144.7 ms