RNA–Protein interactions for RNA: ENST00000543356.6

GNE-206, Transcript of glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase, humanhuman

TSL 1 (best) BASIC

Gene GNE, Length 2,576 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNE-206ENST00000543356 URB1-AS1Q96HZ7 61 aa6.83□□□□□ -1.32
GNE-206ENST00000543356 AP1S3Q96PC3 154 aa6.83□□□□□ -1.32
GNE-206ENST00000543356 MCRIP2Q9BUT9 160 aaKnown RBP6.83□□□□□ -1.32
GNE-206ENST00000543356 ZNF747Q9BV97 191 aa6.83□□□□□ -1.32
GNE-206ENST00000543356 SPANXB1Q9NS25 103 aaPredicted RBP6.83□□□□□ -1.32
GNE-206ENST00000543356 H3BRM9 83 aa6.82□□□□□ -1.32
GNE-206ENST00000543356 AGRNO00468 2067 aa6.82□□□□□ -1.32
GNE-206ENST00000543356 GAGE5Q13069 117 aa6.82□□□□□ -1.32
GNE-206ENST00000543356 GAGE6Q13070 117 aa6.82□□□□□ -1.32
GNE-206ENST00000543356 RNASEKQ6P5S7 137 aaKnown RBP6.82□□□□□ -1.32
GNE-206ENST00000543356 SYT8Q8NBV8 401 aa6.82□□□□□ -1.32
GNE-206ENST00000543356 WFDC9Q8NEX5 89 aa6.82□□□□□ -1.32
GNE-206ENST00000543356 SPATA3Q8NHX4 192 aa6.82□□□□□ -1.32
GNE-206ENST00000543356 DPH3P1Q9H4G8 78 aa6.82□□□□□ -1.32
GNE-206ENST00000543356 MDFICQ9P1T7 246 aa6.82□□□□□ -1.32
GNE-206ENST00000543356 A0A1W2PPM0 123 aa6.81□□□□□ -1.32
GNE-206ENST00000543356 SEC11AP67812 179 aa6.81□□□□□ -1.32
GNE-206ENST00000543356 TMEM97Q5BJF2 176 aa6.81□□□□□ -1.32
GNE-206ENST00000543356 POM121L12Q8N7R1 296 aa6.81□□□□□ -1.32
GNE-206ENST00000543356 RAB37Q96AX2 223 aa6.81□□□□□ -1.32
GNE-206ENST00000543356 SPRY2O43597 315 aa6.81□□□□□ -1.32
GNE-206ENST00000543356 HSBP1O75506 76 aa6.81□□□□□ -1.32
GNE-206ENST00000543356 NCR2O95944 276 aa6.81□□□□□ -1.32
GNE-206ENST00000543356 MORN3Q6PF18 240 aaPredicted RBP6.81□□□□□ -1.32
GNE-206ENST00000543356 LINC00173Q6ZV60 143 aa6.81□□□□□ -1.32
GNE-206ENST00000543356 SMKR1H3BMG3 65 aa6.8□□□□□ -1.32
GNE-206ENST00000543356 WIPF1O43516 503 aa6.8□□□□□ -1.32
GNE-206ENST00000543356 NPYP01303 97 aa6.8□□□□□ -1.32
GNE-206ENST00000543356 ZNF415Q09FC8 603 aa6.8□□□□□ -1.32
GNE-206ENST00000543356 GTSCR1Q86UQ5 136 aa6.8□□□□□ -1.32
GNE-206ENST00000543356 PTH2Q96A98 100 aa6.8□□□□□ -1.32
GNE-206ENST00000543356 WFDC10AQ9H1F0 79 aa6.8□□□□□ -1.32
GNE-206ENST00000543356 KIF25-AS1Q9Y6Z4 181 aa6.8□□□□□ -1.32
GNE-206ENST00000543356 SETD2Q9BYW2 2564 aaPredicted RBP6.8□□□□□ -1.32
GNE-206ENST00000543356 WFDC2Q14508 124 aa6.8□□□□□ -1.32
GNE-206ENST00000543356 PRIMA1Q86XR5 153 aa6.8□□□□□ -1.32
GNE-206ENST00000543356 C14orf178Q8N769 122 aaPredicted RBP6.8□□□□□ -1.32
GNE-206ENST00000543356 C18orf15Q96N68 181 aa6.8□□□□□ -1.32
GNE-206ENST00000543356 LINC01587Q99440 93 aa6.8□□□□□ -1.32
GNE-206ENST00000543356 XCL2Q9UBD3 114 aa6.8□□□□□ -1.32
GNE-206ENST00000543356 HSPB8Q9UJY1 196 aa6.8□□□□□ -1.32
GNE-206ENST00000543356 M0QXV9 152 aa6.79□□□□□ -1.32
GNE-206ENST00000543356 MT-ATP8P03928 68 aa6.79□□□□□ -1.32
GNE-206ENST00000543356 PIK3CD-AS1Q5SR53 167 aa6.79□□□□□ -1.32
GNE-206ENST00000543356 SH2D6Q7Z4S9 175 aa6.79□□□□□ -1.32
GNE-206ENST00000543356 C1orf158Q8N1D5 194 aa6.79□□□□□ -1.32
GNE-206ENST00000543356 MAP1LC3AQ9H492 121 aa6.79□□□□□ -1.32
GNE-206ENST00000543356 GIG44P09565 113 aaPredicted RBP6.79□□□□□ -1.32
GNE-206ENST00000543356 FA2HQ7L5A8 372 aa6.79□□□□□ -1.32
GNE-206ENST00000543356 NRACQ8N912 160 aa6.79□□□□□ -1.32
GNE-206ENST00000543356 PRSS3P2Q8NHM4 247 aa6.79□□□□□ -1.32
GNE-206ENST00000543356 TMEM70Q9BUB7 260 aa6.79□□□□□ -1.32
GNE-206ENST00000543356 C1QTNF4Q9BXJ3 329 aa6.79□□□□□ -1.32
GNE-206ENST00000543356 WNK1Q9H4A3 2382 aa6.79□□□□□ -1.32
GNE-206ENST00000543356 IGHV1-24A0A0C4DH33 117 aa6.78□□□□□ -1.32
GNE-206ENST00000543356 LINC01546A6NGU7 62 aa6.78□□□□□ -1.32
GNE-206ENST00000543356 GAS8-AS1O95177 125 aa6.78□□□□□ -1.32
GNE-206ENST00000543356 SPINK8P0C7L1 97 aa6.78□□□□□ -1.32
GNE-206ENST00000543356 LINC00315P59091 139 aa6.78□□□□□ -1.32
GNE-206ENST00000543356 C11orf72Q8NBR9 251 aa6.78□□□□□ -1.32
GNE-206ENST00000543356 C20orf78Q9BR46 151 aa6.78□□□□□ -1.32
GNE-206ENST00000543356 CDIP1Q9H305 208 aa6.78□□□□□ -1.32
GNE-206ENST00000543356 AP5S1Q9NUS5 200 aa6.78□□□□□ -1.32
GNE-206ENST00000543356 MUC4Q99102 2169 aa6.78□□□□□ -1.32
GNE-206ENST00000543356 IFI27P40305 119 aaPredicted RBP6.78□□□□□ -1.32
GNE-206ENST00000543356 TMEM158Q8WZ71 300 aa6.78□□□□□ -1.32
GNE-206ENST00000543356 PPDPFQ9H3Y8 114 aa6.78□□□□□ -1.32
GNE-206ENST00000543356 TENM1Q9UKZ4 2725 aa6.77□□□□□ -1.33
GNE-206ENST00000543356 TRAV26-2A0A0B4J265 109 aa6.77□□□□□ -1.33
GNE-206ENST00000543356 LOC389332A0A1B0GUA5 103 aa6.77□□□□□ -1.33
GNE-206ENST00000543356 M0R2P5 195 aa6.77□□□□□ -1.33
GNE-206ENST00000543356 MGPP08493 103 aa6.77□□□□□ -1.33
GNE-206ENST00000543356 NHLRC4P0CG21 123 aaPredicted RBP6.77□□□□□ -1.33
GNE-206ENST00000543356 GATA1P15976 413 aaPredicted RBP6.77□□□□□ -1.33
GNE-206ENST00000543356 RPL35AP18077 110 aaKnown RBP6.77□□□□□ -1.33
GNE-206ENST00000543356 ZNF876PQ49A33 203 aa6.77□□□□□ -1.33
GNE-206ENST00000543356 C3orf56Q8N813 242 aa6.77□□□□□ -1.33
GNE-206ENST00000543356 IL17DQ8TAD2 202 aa6.77□□□□□ -1.33
GNE-206ENST00000543356 ANAPC13Q9BS18 74 aa6.77□□□□□ -1.33
GNE-206ENST00000543356 TM2D2Q9BX73 214 aa6.77□□□□□ -1.33
GNE-206ENST00000543356 PPP1R17O96001 155 aa6.77□□□□□ -1.33
GNE-206ENST00000543356 HTN1P15515 57 aa6.77□□□□□ -1.33
GNE-206ENST00000543356 ETDBQ3ZM63 59 aa6.77□□□□□ -1.33
GNE-206ENST00000543356 NXT2Q9NPJ8 142 aaKnown RBP6.77□□□□□ -1.33
GNE-206ENST00000543356 TEP1Q99973 2627 aaKnown RBP6.77□□□□□ -1.33
GNE-206ENST00000543356 A6NDN8 102 aa6.76□□□□□ -1.33
GNE-206ENST00000543356 SYS1-DBNDD2H3BUS1 97 aa6.76□□□□□ -1.33
GNE-206ENST00000543356 CSNK1G2-AS1Q8NCQ2 148 aa6.76□□□□□ -1.33
GNE-206ENST00000543356 JPT2Q9H910 190 aa6.76□□□□□ -1.33
GNE-206ENST00000543356 J3QR89 54 aa6.76□□□□□ -1.33
GNE-206ENST00000543356 CRYGDP07320 174 aa6.76□□□□□ -1.33
GNE-206ENST00000543356 FABP2P12104 132 aa6.76□□□□□ -1.33
GNE-206ENST00000543356 Q8N8P6 123 aa6.76□□□□□ -1.33
GNE-206ENST00000543356 RASL10AQ92737 203 aa6.76□□□□□ -1.33
GNE-206ENST00000543356 SORL1Q92673 2214 aa6.76□□□□□ -1.33
GNE-206ENST00000543356 NIPBLQ6KC79 2804 aaeCLIP6.76□□□□□ -1.33
GNE-206ENST00000543356 IGLV2-18A0A075B6J9 118 aa6.75□□□□□ -1.33
GNE-206ENST00000543356 A0A087WWL8 130 aa6.75□□□□□ -1.33
GNE-206ENST00000543356 A0A087WX48 190 aa6.75□□□□□ -1.33
GNE-206ENST00000543356 PRM2P04554 102 aa6.75□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 70.7 ms