RNA–Protein interactions for RNA: ENST00000543025.5

KDM2B-216, Transcript of lysine demethylase 2B, humanhuman

TSL 1 (best)

Gene KDM2B, Length 2,522 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM2B-216ENST00000543025 TMEM170BQ5T4T1 132 aa12.32□□□□□ -0.44
KDM2B-216ENST00000543025 MDFICQ9P1T7 246 aa12.32□□□□□ -0.44
KDM2B-216ENST00000543025 ZNF256Q9Y2P7 627 aaPredicted RBP12.31□□□□□ -0.44
KDM2B-216ENST00000543025 IGKV3-20P01619 116 aa12.31□□□□□ -0.44
KDM2B-216ENST00000543025 Q8N1Y9 231 aa12.31□□□□□ -0.44
KDM2B-216ENST00000543025 WFDC11Q8NEX6 87 aa12.31□□□□□ -0.44
KDM2B-216ENST00000543025 ZNRF2Q8NHG8 242 aa12.31□□□□□ -0.44
KDM2B-216ENST00000543025 TSSC4Q9Y5U2 329 aaPredicted RBP12.31□□□□□ -0.44
KDM2B-216ENST00000543025 M0QY20 66 aa12.3□□□□□ -0.44
KDM2B-216ENST00000543025 MAPK1IP1LQ8NDC0 245 aa12.3□□□□□ -0.44
KDM2B-216ENST00000543025 DLX4Q92988 240 aaPredicted RBP12.3□□□□□ -0.44
KDM2B-216ENST00000543025 SPAG8Q99932 426 aaPredicted RBP12.3□□□□□ -0.44
KDM2B-216ENST00000543025 AKAP9Q99996 3911 aa12.3□□□□□ -0.44
KDM2B-216ENST00000543025 TSPAN13O95857 204 aa12.3□□□□□ -0.44
KDM2B-216ENST00000543025 NSUN5P1Q3KNT7 163 aa12.3□□□□□ -0.44
KDM2B-216ENST00000543025 IGHV1OR15-1A0A075B7D0 117 aa12.29□□□□□ -0.44
KDM2B-216ENST00000543025 GAGE12HA6NDE8 117 aa12.29□□□□□ -0.44
KDM2B-216ENST00000543025 K7EQG2 157 aa12.29□□□□□ -0.44
KDM2B-216ENST00000543025 GATA3P23771 443 aa12.29□□□□□ -0.44
KDM2B-216ENST00000543025 RHOHQ15669 191 aa12.29□□□□□ -0.44
KDM2B-216ENST00000543025 TMEM89A2RUT3 159 aa12.29□□□□□ -0.44
KDM2B-216ENST00000543025 APOMO95445 188 aa12.29□□□□□ -0.44
KDM2B-216ENST00000543025 TSPEAR-AS2P59090 65 aa12.29□□□□□ -0.44
KDM2B-216ENST00000543025 C10orf99Q6UWK7 81 aa12.29□□□□□ -0.44
KDM2B-216ENST00000543025 TRPT1Q86TN4 253 aaKnown RBP12.29□□□□□ -0.44
KDM2B-216ENST00000543025 SIGMAR1Q99720 223 aa12.29□□□□□ -0.44
KDM2B-216ENST00000543025 IGHV4-59P01825 116 aa12.28□□□□□ -0.44
KDM2B-216ENST00000543025 SPINK13Q1W4C9 94 aa12.28□□□□□ -0.44
KDM2B-216ENST00000543025 BAHCC1Q9P281 2608 aa12.28□□□□□ -0.44
KDM2B-216ENST00000543025 NDUFA11Q86Y39 141 aa12.28□□□□□ -0.44
KDM2B-216ENST00000543025 SLC25A29Q8N8R3 303 aa12.28□□□□□ -0.44
KDM2B-216ENST00000543025 CCDC168Q8NDH2 2452 aa12.28□□□□□ -0.44
KDM2B-216ENST00000543025 SPATA25Q9BR10 227 aa12.28□□□□□ -0.44
KDM2B-216ENST00000543025 LOC107984156A0A0G2JMH3 177 aa12.27□□□□□ -0.45
KDM2B-216ENST00000543025 IGHV3-30P01768 117 aa12.27□□□□□ -0.45
KDM2B-216ENST00000543025 IGHV3-30-5P0DP03 117 aa12.27□□□□□ -0.45
KDM2B-216ENST00000543025 DEFB112Q30KQ8 113 aa12.27□□□□□ -0.45
KDM2B-216ENST00000543025 LYRM7Q5U5X0 104 aa12.27□□□□□ -0.45
KDM2B-216ENST00000543025 CFAP126Q5VTH2 177 aa12.27□□□□□ -0.45
KDM2B-216ENST00000543025 NFE4Q86UQ8 179 aa12.27□□□□□ -0.45
KDM2B-216ENST00000543025 ARL17AQ8IVW1 177 aa12.27□□□□□ -0.45
KDM2B-216ENST00000543025 GTSF1LQ9H1H1 148 aa12.27□□□□□ -0.45
KDM2B-216ENST00000543025 ZNF469Q96JG9 3925 aaPredicted RBP12.27□□□□□ -0.45
KDM2B-216ENST00000543025 J3QQQ9 107 aa12.27□□□□□ -0.45
KDM2B-216ENST00000543025 AZU1P20160 251 aa12.27□□□□□ -0.45
KDM2B-216ENST00000543025 UBE2D3P61077 147 aa12.27□□□□□ -0.45
KDM2B-216ENST00000543025 UBE2D2P62837 147 aa12.27□□□□□ -0.45
KDM2B-216ENST00000543025 LGALS3P17931 250 aaKnown RBP12.26□□□□□ -0.45
KDM2B-216ENST00000543025 ITPR3Q14573 2671 aa12.26□□□□□ -0.45
KDM2B-216ENST00000543025 SCGB1A1P11684 91 aa12.25□□□□□ -0.45
KDM2B-216ENST00000543025 PSMB2P49721 201 aa12.25□□□□□ -0.45
KDM2B-216ENST00000543025 AMELXQ99217 191 aa12.25□□□□□ -0.45
KDM2B-216ENST00000543025 SYNJ2BPP57105 145 aa12.25□□□□□ -0.45
KDM2B-216ENST00000543025 SFTA2Q6UW10 78 aa12.25□□□□□ -0.45
KDM2B-216ENST00000543025 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP12.24□□□□□ -0.452e-7■■■■□ 25
KDM2B-216ENST00000543025 I3L3M4 83 aa12.24□□□□□ -0.45
KDM2B-216ENST00000543025 P0DMU3 169 aa12.24□□□□□ -0.45
KDM2B-216ENST00000543025 FAM231AP0DMU4 169 aa12.24□□□□□ -0.45
KDM2B-216ENST00000543025 FAM231CP0DMU5 169 aa12.24□□□□□ -0.45
KDM2B-216ENST00000543025 IGHV4-31P0DP07 118 aa12.24□□□□□ -0.45
KDM2B-216ENST00000543025 INSL3P51460 131 aa12.24□□□□□ -0.45
KDM2B-216ENST00000543025 LINC01356Q8N9X3 169 aa12.24□□□□□ -0.45
KDM2B-216ENST00000543025 C20orf203Q8NBC4 194 aa12.24□□□□□ -0.45
KDM2B-216ENST00000543025 ATP6V0E2Q8NHE4 81 aa12.24□□□□□ -0.45
KDM2B-216ENST00000543025 OPRPNQ99935 248 aaPredicted RBP12.24□□□□□ -0.45
KDM2B-216ENST00000543025 TRGV11A0A075B6L2 103 aa12.24□□□□□ -0.45
KDM2B-216ENST00000543025 CFC1BP0CG36 223 aa12.24□□□□□ -0.45
KDM2B-216ENST00000543025 CFC1P0CG37 223 aa12.24□□□□□ -0.45
KDM2B-216ENST00000543025 C1QTNF4Q9BXJ3 329 aa12.24□□□□□ -0.45
KDM2B-216ENST00000543025 TMEM223A0PJW6 202 aa12.23□□□□□ -0.45
KDM2B-216ENST00000543025 SMCPP49901 116 aaPredicted RBP12.23□□□□□ -0.45
KDM2B-216ENST00000543025 LEPROTO15243 131 aa12.22□□□□□ -0.45
KDM2B-216ENST00000543025 SMAGPQ0VAQ4 97 aa12.22□□□□□ -0.45
KDM2B-216ENST00000543025 C10orf126Q8N4M7 172 aa12.22□□□□□ -0.45
KDM2B-216ENST00000543025 FOXI1Q12951 378 aa12.22□□□□□ -0.45
KDM2B-216ENST00000543025 RNF152Q8N8N0 203 aa12.22□□□□□ -0.45
KDM2B-216ENST00000543025 ZANQ9Y493 2812 aa12.21□□□□□ -0.45
KDM2B-216ENST00000543025 TRBV20-1A0A075B6N2 111 aa12.21□□□□□ -0.45
KDM2B-216ENST00000543025 DUX5Q96PT3 197 aa12.2□□□□□ -0.46
KDM2B-216ENST00000543025 CREBBPQ92793 2442 aa12.2□□□□□ -0.46
KDM2B-216ENST00000543025 RHODO00212 210 aa12.2□□□□□ -0.46
KDM2B-216ENST00000543025 TGFAP01135 160 aa12.2□□□□□ -0.46
KDM2B-216ENST00000543025 ZNF22P17026 224 aaPredicted RBP12.2□□□□□ -0.46
KDM2B-216ENST00000543025 HOXD3P31249 432 aaPredicted RBP12.2□□□□□ -0.46
KDM2B-216ENST00000543025 PRO1854Q9UHT4 67 aa12.2□□□□□ -0.46
KDM2B-216ENST00000543025 FLNBO75369 2602 aaKnown RBP12.2□□□□□ -0.46
KDM2B-216ENST00000543025 MYO9AB2RTY4 2548 aa12.2□□□□□ -0.46
KDM2B-216ENST00000543025 IGLV4-3A0A075B6K6 122 aa12.19□□□□□ -0.46
KDM2B-216ENST00000543025 ZNF418Q8TF45 676 aaPredicted RBP12.19□□□□□ -0.46
KDM2B-216ENST00000543025 VCX2Q9H322 139 aa12.19□□□□□ -0.46
KDM2B-216ENST00000543025 FLNAP21333 2647 aaKnown RBP12.19□□□□□ -0.46
KDM2B-216ENST00000543025 TCL1BO95988 128 aa12.19□□□□□ -0.46
KDM2B-216ENST00000543025 ELANEP08246 267 aa12.19□□□□□ -0.46
KDM2B-216ENST00000543025 NOTCH2Q04721 2471 aa12.19□□□□□ -0.46
KDM2B-216ENST00000543025 EDA2RQ9HAV5 297 aa12.18□□□□□ -0.46
KDM2B-216ENST00000543025 UBE2E2Q96LR5 201 aa12.18□□□□□ -0.46
KDM2B-216ENST00000543025 A0A0J9YXV3 536 aa12.17□□□□□ -0.46
KDM2B-216ENST00000543025 J3QLI3 93 aa12.17□□□□□ -0.46
KDM2B-216ENST00000543025 VPREB3Q9UKI3 123 aa12.17□□□□□ -0.46
KDM2B-216ENST00000543025 OTOGQ6ZRI0 2925 aa12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms