RNA–Protein interactions for RNA: ENST00000543002.5

RABGGTA-203, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 2

Gene RABGGTA, Length 1,329 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-203ENST00000543002 SIVA1O15304 175 aa11.71□□□□□ -0.53
RABGGTA-203ENST00000543002 LELP1Q5T871 98 aa11.71□□□□□ -0.53
RABGGTA-203ENST00000543002 MRPL54Q6P161 138 aaKnown RBP11.71□□□□□ -0.53
RABGGTA-203ENST00000543002 GATD1Q8NB37 220 aa11.71□□□□□ -0.53
RABGGTA-203ENST00000543002 FRZBQ92765 325 aa11.71□□□□□ -0.53
RABGGTA-203ENST00000543002 NIT2Q9NQR4 276 aa11.71□□□□□ -0.53
RABGGTA-203ENST00000543002 TNFRSF18Q9Y5U5 241 aa11.71□□□□□ -0.53
RABGGTA-203ENST00000543002 A0A087WWC5 75 aa11.7□□□□□ -0.54
RABGGTA-203ENST00000543002 TRAV26-2A0A0B4J265 109 aa11.7□□□□□ -0.54
RABGGTA-203ENST00000543002 A0A1B0GXF2 115 aa11.7□□□□□ -0.54
RABGGTA-203ENST00000543002 S100A8P05109 93 aa11.7□□□□□ -0.54
RABGGTA-203ENST00000543002 CAMPP49913 170 aa11.7□□□□□ -0.54
RABGGTA-203ENST00000543002 HBBP68871 147 aa11.7□□□□□ -0.54
RABGGTA-203ENST00000543002 Q6ZR54 194 aa11.7□□□□□ -0.54
RABGGTA-203ENST00000543002 RNF185Q96GF1 192 aa11.7□□□□□ -0.54
RABGGTA-203ENST00000543002 IMMP2LQ96T52 175 aa11.7□□□□□ -0.54
RABGGTA-203ENST00000543002 TRAV8-6A0A0B4J262 113 aa11.69□□□□□ -0.54
RABGGTA-203ENST00000543002 NBDYA0A0U1RRE5 68 aa11.69□□□□□ -0.54
RABGGTA-203ENST00000543002 C7orf77A4D0Y5 90 aa11.69□□□□□ -0.54
RABGGTA-203ENST00000543002 M0R2N4 97 aa11.69□□□□□ -0.54
RABGGTA-203ENST00000543002 RAB4AP20338 218 aa11.69□□□□□ -0.54
RABGGTA-203ENST00000543002 ATP5L2Q7Z4Y8 100 aa11.69□□□□□ -0.54
RABGGTA-203ENST00000543002 WFDC10BQ8IUB3 73 aa11.69□□□□□ -0.54
RABGGTA-203ENST00000543002 AMN1Q8IY45 258 aa11.69□□□□□ -0.54
RABGGTA-203ENST00000543002 SREK1IP1Q8N9Q2 155 aaPredicted RBP11.69□□□□□ -0.54
RABGGTA-203ENST00000543002 CLRN3Q8NCR9 226 aa11.69□□□□□ -0.54
RABGGTA-203ENST00000543002 RHEBQ15382 184 aa11.68□□□□□ -0.54
RABGGTA-203ENST00000543002 NDUFA5Q16718 116 aa11.68□□□□□ -0.54
RABGGTA-203ENST00000543002 OR10J3Q5JRS4 329 aa11.68□□□□□ -0.54
RABGGTA-203ENST00000543002 DAZ4Q86SG3 579 aaKnown RBP11.68□□□□□ -0.54
RABGGTA-203ENST00000543002 DAZ3Q9NR90 486 aaKnown RBP11.68□□□□□ -0.54
RABGGTA-203ENST00000543002 TMEM242Q9NWH2 141 aa11.68□□□□□ -0.54
RABGGTA-203ENST00000543002 HYDINQ4G0P3 5121 aa11.68□□□□□ -0.54
RABGGTA-203ENST00000543002 KMT2AQ03164 3969 aa11.67□□□□□ -0.54
RABGGTA-203ENST00000543002 RYR3Q15413 4870 aa11.67□□□□□ -0.54
RABGGTA-203ENST00000543002 IGHV3-38A0A0C4DH36 116 aa11.67□□□□□ -0.54
RABGGTA-203ENST00000543002 APOC3P02656 99 aa11.67□□□□□ -0.54
RABGGTA-203ENST00000543002 FAM104BQ5XKR9 115 aa11.67□□□□□ -0.54
RABGGTA-203ENST00000543002 MRAP2Q96G30 205 aa11.67□□□□□ -0.54
RABGGTA-203ENST00000543002 DNAH10OSP0CZ25 163 aa11.66□□□□□ -0.54
RABGGTA-203ENST00000543002 TTC32Q5I0X7 151 aa11.66□□□□□ -0.54
RABGGTA-203ENST00000543002 KCNIP4Q6PIL6 250 aa11.66□□□□□ -0.54
RABGGTA-203ENST00000543002 SLC7A5P1Q8MH63 180 aa11.66□□□□□ -0.54
RABGGTA-203ENST00000543002 RPL39LQ96EH5 51 aaKnown RBP11.66□□□□□ -0.54
RABGGTA-203ENST00000543002 BTF3L4Q96K17 158 aa11.66□□□□□ -0.54
RABGGTA-203ENST00000543002 RPS10P5Q9NQ39 176 aa11.66□□□□□ -0.54
RABGGTA-203ENST00000543002 TMEM97Q5BJF2 176 aa11.65□□□□□ -0.54
RABGGTA-203ENST00000543002 SVBPQ8N300 66 aa11.65□□□□□ -0.54
RABGGTA-203ENST00000543002 DNAH6Q9C0G6 4158 aa11.65□□□□□ -0.55
RABGGTA-203ENST00000543002 TRBV6-8A0A0A6YYG3 113 aa11.64□□□□□ -0.55
RABGGTA-203ENST00000543002 TRBV6-5A0A0K0K1A5 114 aa11.64□□□□□ -0.55
RABGGTA-203ENST00000543002 GAS8-AS1O95177 125 aa11.64□□□□□ -0.55
RABGGTA-203ENST00000543002 SNAPINO95295 136 aa11.64□□□□□ -0.55
RABGGTA-203ENST00000543002 MRPL51Q4U2R6 128 aaKnown RBP11.64□□□□□ -0.55
RABGGTA-203ENST00000543002 KRTAP1-5Q9BYS1 174 aa11.64□□□□□ -0.55
RABGGTA-203ENST00000543002 TRAV9-1A0A075B6T8 112 aa11.63□□□□□ -0.55
RABGGTA-203ENST00000543002 K7EP13 123 aa11.63□□□□□ -0.55
RABGGTA-203ENST00000543002 LINC01556Q5JQF7 62 aa11.63□□□□□ -0.55
RABGGTA-203ENST00000543002 NTM-AS1Q6ZSK4 140 aa11.63□□□□□ -0.55
RABGGTA-203ENST00000543002 TRAV9-2A0A087WT02 112 aa11.62□□□□□ -0.55
RABGGTA-203ENST00000543002 S100PP25815 95 aa11.62□□□□□ -0.55
RABGGTA-203ENST00000543002 RPS10P46783 165 aaKnown RBP11.62□□□□□ -0.55
RABGGTA-203ENST00000543002 SDHAF1A6NFY7 115 aa11.61□□□□□ -0.55
RABGGTA-203ENST00000543002 SMKR1H3BMG3 65 aa11.61□□□□□ -0.55
RABGGTA-203ENST00000543002 NCR2O95944 276 aa11.61□□□□□ -0.55
RABGGTA-203ENST00000543002 PPP1R17O96001 155 aa11.61□□□□□ -0.55
RABGGTA-203ENST00000543002 NIT1Q86X76 327 aa11.6□□□□□ -0.55
RABGGTA-203ENST00000543002 NRACQ8N912 160 aa11.6□□□□□ -0.55
RABGGTA-203ENST00000543002 ST20Q9HBF5 79 aa11.6□□□□□ -0.55
RABGGTA-203ENST00000543002 URGCP-MRPS24S4R325 110 aa11.6□□□□□ -0.55
RABGGTA-203ENST00000543002 TRBV25-1A0A075B6N4 114 aa11.6□□□□□ -0.55
RABGGTA-203ENST00000543002 IGHV1-24A0A0C4DH33 117 aa11.6□□□□□ -0.55
RABGGTA-203ENST00000543002 BTF3P20290 206 aaKnown RBP11.6□□□□□ -0.55
RABGGTA-203ENST00000543002 CKS2P33552 79 aa11.6□□□□□ -0.55
RABGGTA-203ENST00000543002 COTL1Q14019 142 aa11.6□□□□□ -0.55
RABGGTA-203ENST00000543002 IQCJQ1A5X6 159 aa11.6□□□□□ -0.55
RABGGTA-203ENST00000543002 C1orf134Q5TEV5 83 aa11.6□□□□□ -0.55
RABGGTA-203ENST00000543002 C10orf126Q8N4M7 172 aa11.6□□□□□ -0.55
RABGGTA-203ENST00000543002 IGHV3-30P01768 117 aa11.59□□□□□ -0.55
RABGGTA-203ENST00000543002 IGHV3-33P01772 117 aa11.59□□□□□ -0.55
RABGGTA-203ENST00000543002 PPBPP02775 128 aa11.59□□□□□ -0.55
RABGGTA-203ENST00000543002 IGHV3-30-3P0DP02 117 aa11.59□□□□□ -0.55
RABGGTA-203ENST00000543002 IGHV3-30-5P0DP03 117 aa11.59□□□□□ -0.55
RABGGTA-203ENST00000543002 POLR2KP53803 58 aaKnown RBP11.59□□□□□ -0.55
RABGGTA-203ENST00000543002 C6orf223Q8N319 242 aa11.59□□□□□ -0.55
RABGGTA-203ENST00000543002 TMEM70Q9BUB7 260 aa11.59□□□□□ -0.55
RABGGTA-203ENST00000543002 D6R8Y8 96 aa11.58□□□□□ -0.56
RABGGTA-203ENST00000543002 Q8N3U1 123 aa11.58□□□□□ -0.56
RABGGTA-203ENST00000543002 CHCHD5Q9BSY4 110 aa11.58□□□□□ -0.56
RABGGTA-203ENST00000543002 TRBV24-1A0A075B6N3 115 aa11.57□□□□□ -0.56
RABGGTA-203ENST00000543002 I3L3M4 83 aa11.57□□□□□ -0.56
RABGGTA-203ENST00000543002 RTL8CO15255 209 aa11.57□□□□□ -0.56
RABGGTA-203ENST00000543002 PMCHP20382 165 aa11.57□□□□□ -0.56
RABGGTA-203ENST00000543002 PKIAP61925 76 aa11.57□□□□□ -0.56
RABGGTA-203ENST00000543002 SUMO2P61956 95 aaKnown RBP11.57□□□□□ -0.56
RABGGTA-203ENST00000543002 TMEM136Q6ZRR5 245 aa11.57□□□□□ -0.56
RABGGTA-203ENST00000543002 DEFB104AQ8WTQ1 72 aa11.57□□□□□ -0.56
RABGGTA-203ENST00000543002 CHCHD7Q9BUK0 85 aa11.57□□□□□ -0.56
RABGGTA-203ENST00000543002 A0A087WX48 190 aa11.56□□□□□ -0.56
RABGGTA-203ENST00000543002 TRBV27A0A0K0K1C4 114 aa11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 68.7 ms