RNA–Protein interactions for RNA: ENST00000542286.5

DDX55-209, Transcript of DEAD-box helicase 55, humanhuman

TSL 2

Gene DDX55, Length 2,767 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-209ENST00000542286 ZNF843Q8N446 348 aa11□□□□□ -0.65
DDX55-209ENST00000542286 EMP1P54849 157 aa11□□□□□ -0.65
DDX55-209ENST00000542286 SUMO2P61956 95 aaKnown RBP11□□□□□ -0.65
DDX55-209ENST00000542286 SS18L2Q9UHA2 77 aa11□□□□□ -0.65
DDX55-209ENST00000542286 C2CD3Q4AC94 2353 aa11□□□□□ -0.65
DDX55-209ENST00000542286 LINC01619G3V211 115 aa10.99□□□□□ -0.65
DDX55-209ENST00000542286 IGHV4-31P0DP07 118 aa10.99□□□□□ -0.65
DDX55-209ENST00000542286 SLC25A16P16260 332 aa10.99□□□□□ -0.65
DDX55-209ENST00000542286 SLURP1P55000 103 aa10.99□□□□□ -0.65
DDX55-209ENST00000542286 CARD19Q96LW7 228 aa10.99□□□□□ -0.65
DDX55-209ENST00000542286 LENEPQ9Y5L5 61 aa10.99□□□□□ -0.65
DDX55-209ENST00000542286 C11orf44Q8N8P7 122 aa10.99□□□□□ -0.65
DDX55-209ENST00000542286 DPH3P1Q9H4G8 78 aa10.99□□□□□ -0.65
DDX55-209ENST00000542286 H7C1H1 209 aa10.99□□□□□ -0.65
DDX55-209ENST00000542286 LGALS1P09382 135 aaKnown RBP10.99□□□□□ -0.65
DDX55-209ENST00000542286 HOXD3P31249 432 aaPredicted RBP10.99□□□□□ -0.65
DDX55-209ENST00000542286 FAM159AQ6UWV7 190 aa10.99□□□□□ -0.65
DDX55-209ENST00000542286 NACAE9PAV3 2078 aa10.99□□□□□ -0.65
DDX55-209ENST00000542286 NOTCH2Q04721 2471 aa10.98□□□□□ -0.65
DDX55-209ENST00000542286 PRSS29PA6NIE9 313 aa10.98□□□□□ -0.65
DDX55-209ENST00000542286 F5H697 171 aa10.98□□□□□ -0.65
DDX55-209ENST00000542286 F8VRH5 84 aa10.98□□□□□ -0.65
DDX55-209ENST00000542286 KHDC1LQ5JSQ8 128 aa10.98□□□□□ -0.65
DDX55-209ENST00000542286 PPDPFLQ8WWR9 84 aa10.98□□□□□ -0.65
DDX55-209ENST00000542286 ANAPC13Q9BS18 74 aa10.98□□□□□ -0.65
DDX55-209ENST00000542286 ZNF702PQ9H963 129 aa10.98□□□□□ -0.65
DDX55-209ENST00000542286 VPREB3Q9UKI3 123 aa10.98□□□□□ -0.65
DDX55-209ENST00000542286 SETXQ7Z333 2677 aaKnown RBP10.97□□□□□ -0.65
DDX55-209ENST00000542286 KLLNB2CW77 178 aa10.97□□□□□ -0.65
DDX55-209ENST00000542286 BRI3O95415 125 aa10.97□□□□□ -0.65
DDX55-209ENST00000542286 Q96MF0 132 aa10.97□□□□□ -0.65
DDX55-209ENST00000542286 KNCNA6PVL3 124 aa10.96□□□□□ -0.65
DDX55-209ENST00000542286 LINC00315P59091 139 aa10.96□□□□□ -0.65
DDX55-209ENST00000542286 TEN1Q86WV5 123 aa10.96□□□□□ -0.65
DDX55-209ENST00000542286 SCGB3A1Q96QR1 104 aa10.96□□□□□ -0.65
DDX55-209ENST00000542286 A6NJY4 79 aa10.96□□□□□ -0.66
DDX55-209ENST00000542286 RPL39P62891 51 aaKnown RBP10.96□□□□□ -0.66
DDX55-209ENST00000542286 SRSF9Q13242 221 aaKnown RBP eCLIP10.96□□□□□ -0.661e-6■■■■□ 21.5
DDX55-209ENST00000542286 ID1P41134 155 aa10.95□□□□□ -0.66
DDX55-209ENST00000542286 DSCR9P59020 149 aa10.95□□□□□ -0.66
DDX55-209ENST00000542286 TRAV12-1A0A0B4J245 112 aa10.95□□□□□ -0.66
DDX55-209ENST00000542286 DUSP14O95147 198 aaKnown RBP10.95□□□□□ -0.66
DDX55-209ENST00000542286 UBE2D1P51668 147 aa10.95□□□□□ -0.66
DDX55-209ENST00000542286 GAGE5Q13069 117 aa10.95□□□□□ -0.66
DDX55-209ENST00000542286 GAGE6Q13070 117 aa10.95□□□□□ -0.66
DDX55-209ENST00000542286 SCGB1D4Q6XE38 83 aa10.95□□□□□ -0.66
DDX55-209ENST00000542286 Q8N1Y9 231 aa10.95□□□□□ -0.66
DDX55-209ENST00000542286 K7EMT4 169 aa10.94□□□□□ -0.66
DDX55-209ENST00000542286 UBE2D3P61077 147 aa10.94□□□□□ -0.66
DDX55-209ENST00000542286 UBE2D2P62837 147 aa10.94□□□□□ -0.66
DDX55-209ENST00000542286 SUMO4Q6EEV6 95 aa10.94□□□□□ -0.66
DDX55-209ENST00000542286 C2orf66Q6UXQ4 117 aa10.94□□□□□ -0.66
DDX55-209ENST00000542286 APRG1Q8IVJ8 170 aa10.94□□□□□ -0.66
DDX55-209ENST00000542286 PRADC1Q9BSG0 188 aa10.94□□□□□ -0.66
DDX55-209ENST00000542286 KIF25-AS1Q9Y6Z4 181 aa10.94□□□□□ -0.66
DDX55-209ENST00000542286 IGHV3-73A0A0B4J1V6 119 aa10.94□□□□□ -0.66
DDX55-209ENST00000542286 A0A0J9YX75 114 aa10.94□□□□□ -0.66
DDX55-209ENST00000542286 ZNF815PA8K554 130 aa10.94□□□□□ -0.66
DDX55-209ENST00000542286 ZFAND6Q6FIF0 208 aa10.94□□□□□ -0.66
DDX55-209ENST00000542286 Q6YL49 198 aa10.94□□□□□ -0.66
DDX55-209ENST00000542286 KIR2DL4Q99706 377 aa10.94□□□□□ -0.66
DDX55-209ENST00000542286 B5MCH6 92 aa10.94□□□□□ -0.66
DDX55-209ENST00000542286 RBMY1A1P0DJD3 496 aaKnown RBP10.94□□□□□ -0.66
DDX55-209ENST00000542286 RBMY1CP0DJD4 496 aa10.94□□□□□ -0.66
DDX55-209ENST00000542286 RBMY1FQ15415 496 aaKnown RBP10.94□□□□□ -0.66
DDX55-209ENST00000542286 PLEKHB2Q96CS7 222 aa10.94□□□□□ -0.66
DDX55-209ENST00000542286 ZNF256Q9Y2P7 627 aaPredicted RBP10.94□□□□□ -0.66
DDX55-209ENST00000542286 K7EQG2 157 aa10.93□□□□□ -0.66
DDX55-209ENST00000542286 TEX29Q8N6K0 151 aa10.93□□□□□ -0.66
DDX55-209ENST00000542286 VCX2Q9H322 139 aa10.93□□□□□ -0.66
DDX55-209ENST00000542286 TCL1BO95988 128 aa10.93□□□□□ -0.66
DDX55-209ENST00000542286 A8MWV9 139 aa10.92□□□□□ -0.66
DDX55-209ENST00000542286 SNRPD3P62318 126 aaKnown RBP10.92□□□□□ -0.66
DDX55-209ENST00000542286 OPRPNQ99935 248 aaPredicted RBP10.92□□□□□ -0.66
DDX55-209ENST00000542286 HECTD1Q9ULT8 2610 aa10.92□□□□□ -0.66
DDX55-209ENST00000542286 NEXN-AS1Q8NBZ9 246 aa10.91□□□□□ -0.66
DDX55-209ENST00000542286 BAALCQ8WXS3 180 aa10.91□□□□□ -0.66
DDX55-209ENST00000542286 FASNP49327 2511 aaKnown RBP10.91□□□□□ -0.66
DDX55-209ENST00000542286 IGHV3-16A0A0C4DH30 117 aa10.91□□□□□ -0.66
DDX55-209ENST00000542286 DEFB113Q30KQ7 82 aa10.91□□□□□ -0.66
DDX55-209ENST00000542286 LYRM7Q5U5X0 104 aa10.91□□□□□ -0.66
DDX55-209ENST00000542286 KLHL30-AS1Q8NEE0 82 aa10.91□□□□□ -0.66
DDX55-209ENST00000542286 TOMM6Q96B49 74 aa10.91□□□□□ -0.66
DDX55-209ENST00000542286 PDZD2O15018 2839 aa10.91□□□□□ -0.66
DDX55-209ENST00000542286 PROK1P58294 105 aa10.9□□□□□ -0.66
DDX55-209ENST00000542286 DEFB131AP59861 70 aa10.9□□□□□ -0.66
DDX55-209ENST00000542286 ZNF56Q15929 161 aa10.9□□□□□ -0.66
DDX55-209ENST00000542286 ANKRD29Q8N6D5 301 aa10.9□□□□□ -0.66
DDX55-209ENST00000542286 WFDC11Q8NEX6 87 aa10.9□□□□□ -0.66
DDX55-209ENST00000542286 Q9UF83 564 aa10.9□□□□□ -0.66
DDX55-209ENST00000542286 TP53TG1Q9Y2A0 90 aa10.9□□□□□ -0.66
DDX55-209ENST00000542286 A0A1W2PRX2 142 aa10.9□□□□□ -0.66
DDX55-209ENST00000542286 TSHBP01222 138 aa10.9□□□□□ -0.66
DDX55-209ENST00000542286 FSHBP01225 129 aa10.9□□□□□ -0.66
DDX55-209ENST00000542286 P0DMU3 169 aa10.9□□□□□ -0.66
DDX55-209ENST00000542286 FAM231AP0DMU4 169 aa10.9□□□□□ -0.66
DDX55-209ENST00000542286 FAM231CP0DMU5 169 aa10.9□□□□□ -0.66
DDX55-209ENST00000542286 NDUFA11Q86Y39 141 aa10.9□□□□□ -0.66
DDX55-209ENST00000542286 ZNF580Q9UK33 172 aa10.9□□□□□ -0.66
DDX55-209ENST00000542286 TRBV20-1A0A075B6N2 111 aa10.89□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms