RNA–Protein interactions for RNA: ENST00000541167.5

RAP1B-223, Transcript of RAP1B, member of RAS oncogene family, human

TSL 4

Gene RAP1B, Length 561 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RAP1B-223	ENST00000541167	SUMO4	Q6EEV6	95 aa		13.61	□□□□□ -0.23
RAP1B-223	ENST00000541167	C10orf126	Q8N4M7	172 aa		13.61	□□□□□ -0.23
RAP1B-223	ENST00000541167	IGHV3-30	P01768	117 aa		13.6	□□□□□ -0.23
RAP1B-223	ENST00000541167	IGHV3-33	P01772	117 aa		13.6	□□□□□ -0.23
RAP1B-223	ENST00000541167	IGHV3-30-3	P0DP02	117 aa		13.6	□□□□□ -0.23
RAP1B-223	ENST00000541167	IGHV3-30-5	P0DP03	117 aa		13.6	□□□□□ -0.23
RAP1B-223	ENST00000541167	TSKU	Q8WUA8	353 aa		13.6	□□□□□ -0.23
RAP1B-223	ENST00000541167	BORCS7	Q96B45	105 aa		13.6	□□□□□ -0.23
RAP1B-223	ENST00000541167		H7C1H1	209 aa		13.59	□□□□□ -0.23
RAP1B-223	ENST00000541167	SREK1IP1	Q8N9Q2	155 aa	Predicted RBP	13.59	□□□□□ -0.23
RAP1B-223	ENST00000541167	TNFRSF18	Q9Y5U5	241 aa		13.59	□□□□□ -0.23
RAP1B-223	ENST00000541167		M0QY20	66 aa		13.58	□□□□□ -0.24
RAP1B-223	ENST00000541167	CLLU1	Q5K131	121 aa		13.58	□□□□□ -0.24
RAP1B-223	ENST00000541167	SMIM15	Q7Z3B0	74 aa		13.58	□□□□□ -0.24
RAP1B-223	ENST00000541167	GFRA4	Q9GZZ7	299 aa		13.58	□□□□□ -0.24
RAP1B-223	ENST00000541167		V9GYV3	84 aa		13.58	□□□□□ -0.24
RAP1B-223	ENST00000541167	HIGD1C	A8MV81	97 aa		13.57	□□□□□ -0.24
RAP1B-223	ENST00000541167	FOXA3	P55318	350 aa	Predicted RBP	13.57	□□□□□ -0.24
RAP1B-223	ENST00000541167	NFE4	Q86UQ8	179 aa		13.57	□□□□□ -0.24
RAP1B-223	ENST00000541167	IFITM2	Q01629	132 aa		13.56	□□□□□ -0.24
RAP1B-223	ENST00000541167	RASL11A	Q6T310	242 aa		13.56	□□□□□ -0.24
RAP1B-223	ENST00000541167	DNAJC30	Q96LL9	226 aa		13.56	□□□□□ -0.24
RAP1B-223	ENST00000541167	HECTD4	Q9Y4D8	3996 aa		13.56	□□□□□ -0.24
RAP1B-223	ENST00000541167	FAM231B	A6NCW3	169 aa		13.55	□□□□□ -0.24
RAP1B-223	ENST00000541167		Q6ZRN7	208 aa	Predicted RBP	13.55	□□□□□ -0.24
RAP1B-223	ENST00000541167		Q8N3U1	123 aa		13.55	□□□□□ -0.24
RAP1B-223	ENST00000541167	PCLO	Q9Y6V0	5065 aa		13.54	□□□□□ -0.24
RAP1B-223	ENST00000541167		A0A1B0GUT8	65 aa		13.54	□□□□□ -0.24
RAP1B-223	ENST00000541167	DAZ4	Q86SG3	579 aa	Known RBP	13.54	□□□□□ -0.24
RAP1B-223	ENST00000541167	DAZ3	Q9NR90	486 aa	Known RBP	13.54	□□□□□ -0.24
RAP1B-223	ENST00000541167	URGCP-MRPS24	S4R325	110 aa		13.54	□□□□□ -0.24
RAP1B-223	ENST00000541167	TRBV6-8	A0A0A6YYG3	113 aa		13.53	□□□□□ -0.24
RAP1B-223	ENST00000541167	IBA57-AS1	B1ANH7	110 aa		13.53	□□□□□ -0.24
RAP1B-223	ENST00000541167	HERC2	O95714	4834 aa		13.52	□□□□□ -0.24
RAP1B-223	ENST00000541167	TMEM97	Q5BJF2	176 aa		13.52	□□□□□ -0.25
RAP1B-223	ENST00000541167	NIT1	Q86X76	327 aa		13.52	□□□□□ -0.25
RAP1B-223	ENST00000541167		Q9HAA7	133 aa		13.52	□□□□□ -0.25
RAP1B-223	ENST00000541167	NIT2	Q9NQR4	276 aa		13.52	□□□□□ -0.25
RAP1B-223	ENST00000541167	TRAV26-2	A0A0B4J265	109 aa		13.51	□□□□□ -0.25
RAP1B-223	ENST00000541167	NUP35	Q8NFH5	326 aa		13.51	□□□□□ -0.25
RAP1B-223	ENST00000541167	NAT8B	Q9UHF3	227 aa		13.51	□□□□□ -0.25
RAP1B-223	ENST00000541167	RIG	Q13278	110 aa		13.5	□□□□□ -0.25
RAP1B-223	ENST00000541167	KCNIP4	Q6PIL6	250 aa		13.5	□□□□□ -0.25
RAP1B-223	ENST00000541167	GATD1	Q8NB37	220 aa		13.5	□□□□□ -0.25
RAP1B-223	ENST00000541167		A0A087WX48	190 aa		13.49	□□□□□ -0.25
RAP1B-223	ENST00000541167	LAGE3	Q14657	143 aa		13.49	□□□□□ -0.25
RAP1B-223	ENST00000541167	NTM-AS1	Q6ZSK4	140 aa		13.49	□□□□□ -0.25
RAP1B-223	ENST00000541167	CHCHD5	Q9BSY4	110 aa		13.49	□□□□□ -0.25
RAP1B-223	ENST00000541167	PKD1	P98161	4303 aa		13.49	□□□□□ -0.25
RAP1B-223	ENST00000541167	SMIM27	A0A1W2PRY6	76 aa		13.48	□□□□□ -0.25
RAP1B-223	ENST00000541167	TMEM262	E9PQX1	116 aa		13.48	□□□□□ -0.25
RAP1B-223	ENST00000541167	FRZB	Q92765	325 aa		13.48	□□□□□ -0.25
RAP1B-223	ENST00000541167	CHCHD7	Q9BUK0	85 aa		13.48	□□□□□ -0.25
RAP1B-223	ENST00000541167	TMEM191A	Q9H0A3	160 aa		13.48	□□□□□ -0.25
RAP1B-223	ENST00000541167	TRBV25-1	A0A075B6N4	114 aa		13.47	□□□□□ -0.25
RAP1B-223	ENST00000541167	PSCA	O43653	123 aa		13.47	□□□□□ -0.25
RAP1B-223	ENST00000541167	RPL39L	Q96EH5	51 aa	Known RBP	13.47	□□□□□ -0.25
RAP1B-223	ENST00000541167	PNRC1	Q12796	327 aa	Predicted RBP	13.46	□□□□□ -0.25
RAP1B-223	ENST00000541167	KLK12	Q9UKR0	248 aa		13.46	□□□□□ -0.25
RAP1B-223	ENST00000541167	IGHV1-24	A0A0C4DH33	117 aa		13.45	□□□□□ -0.26
RAP1B-223	ENST00000541167	EREG	O14944	169 aa		13.45	□□□□□ -0.26
RAP1B-223	ENST00000541167	PKIA	P61925	76 aa		13.45	□□□□□ -0.26
RAP1B-223	ENST00000541167	SPATA12	Q7Z6I5	190 aa		13.45	□□□□□ -0.26
RAP1B-223	ENST00000541167	TRAV8-3	A0A0A6YYJ7	113 aa		13.44	□□□□□ -0.26
RAP1B-223	ENST00000541167	PPP1R2P9	O14990	202 aa		13.44	□□□□□ -0.26
RAP1B-223	ENST00000541167	ELOB	Q15370	118 aa		13.44	□□□□□ -0.26
RAP1B-223	ENST00000541167	IQCJ	Q1A5X6	159 aa		13.44	□□□□□ -0.26
RAP1B-223	ENST00000541167	MPV17L2	Q567V2	206 aa		13.44	□□□□□ -0.26
RAP1B-223	ENST00000541167	UQCC3	Q6UW78	93 aa		13.44	□□□□□ -0.26
RAP1B-223	ENST00000541167	AMN1	Q8IY45	258 aa		13.44	□□□□□ -0.26
RAP1B-223	ENST00000541167	DEFB104A	Q8WTQ1	72 aa		13.44	□□□□□ -0.26
RAP1B-223	ENST00000541167	GAGE6	Q13070	117 aa		13.43	□□□□□ -0.26
RAP1B-223	ENST00000541167	COTL1	Q14019	142 aa		13.43	□□□□□ -0.26
RAP1B-223	ENST00000541167	RNF185	Q96GF1	192 aa		13.43	□□□□□ -0.26
RAP1B-223	ENST00000541167	DNAH11	Q96DT5	4516 aa		13.43	□□□□□ -0.26
RAP1B-223	ENST00000541167	PKHD1	P08F94	4074 aa		13.42	□□□□□ -0.26
RAP1B-223	ENST00000541167		A0A087WTM6	91 aa		13.42	□□□□□ -0.26
RAP1B-223	ENST00000541167	C16orf90	A8MZG2	172 aa		13.42	□□□□□ -0.26
RAP1B-223	ENST00000541167	RAB4A	P20338	218 aa		13.42	□□□□□ -0.26
RAP1B-223	ENST00000541167	CAMP	P49913	170 aa		13.42	□□□□□ -0.26
RAP1B-223	ENST00000541167	UBE2W	Q96B02	151 aa		13.42	□□□□□ -0.26
RAP1B-223	ENST00000541167	MRAP2	Q96G30	205 aa		13.42	□□□□□ -0.26
RAP1B-223	ENST00000541167	TMEM243	Q9BU79	118 aa		13.42	□□□□□ -0.26
RAP1B-223	ENST00000541167	TM2D2	Q9BX73	214 aa		13.42	□□□□□ -0.26
RAP1B-223	ENST00000541167	ATRAID	Q6UW56	229 aa		13.41	□□□□□ -0.26
RAP1B-223	ENST00000541167	DYNC1H1	Q14204	4646 aa	Known RBP	13.41	□□□□□ -0.26
RAP1B-223	ENST00000541167		A0A1B0GW15	77 aa		13.4	□□□□□ -0.26
RAP1B-223	ENST00000541167	SDHAF1	A6NFY7	115 aa		13.4	□□□□□ -0.26
RAP1B-223	ENST00000541167	GAS8-AS1	O95177	125 aa		13.4	□□□□□ -0.26
RAP1B-223	ENST00000541167	MT-ND4L	P03901	98 aa		13.4	□□□□□ -0.26
RAP1B-223	ENST00000541167	ANG	P03950	147 aa	Known RBP	13.4	□□□□□ -0.26
RAP1B-223	ENST00000541167	AMT	P48728	403 aa		13.4	□□□□□ -0.26
RAP1B-223	ENST00000541167	KRTAP10-2	P60368	255 aa		13.4	□□□□□ -0.26
RAP1B-223	ENST00000541167	MRPL54	Q6P161	138 aa	Known RBP	13.4	□□□□□ -0.26
RAP1B-223	ENST00000541167	COMMD7	Q86VX2	200 aa		13.4	□□□□□ -0.26
RAP1B-223	ENST00000541167		Q8N976	141 aa		13.4	□□□□□ -0.26
RAP1B-223	ENST00000541167	RMI2	Q96E14	147 aa		13.4	□□□□□ -0.26
RAP1B-223	ENST00000541167	TMEM218	A2RU14	115 aa		13.39	□□□□□ -0.27
RAP1B-223	ENST00000541167	CRP	P02741	224 aa		13.39	□□□□□ -0.27
RAP1B-223	ENST00000541167	ANAPC16	Q96DE5	110 aa		13.39	□□□□□ -0.27

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