RNA–Protein interactions for RNA: ENST00000540763.5

DDX55-207, Transcript of DEAD-box helicase 55, humanhuman

TSL 3

Gene DDX55, Length 799 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-207ENST00000540763 SUMO4Q6EEV6 95 aa13.33□□□□□ -0.28
DDX55-207ENST00000540763 DNAJC30Q96LL9 226 aa13.33□□□□□ -0.28
DDX55-207ENST00000540763 TMEM191AQ9H0A3 160 aa13.33□□□□□ -0.28
DDX55-207ENST00000540763 TTC32Q5I0X7 151 aa13.32□□□□□ -0.28
DDX55-207ENST00000540763 LELP1Q5T871 98 aa13.32□□□□□ -0.28
DDX55-207ENST00000540763 Q6ZR54 194 aa13.32□□□□□ -0.28
DDX55-207ENST00000540763 CARHSP1Q9Y2V2 147 aaKnown RBP13.32□□□□□ -0.28
DDX55-207ENST00000540763 A0A087WWC5 75 aa13.31□□□□□ -0.28
DDX55-207ENST00000540763 SIVA1O15304 175 aa13.31□□□□□ -0.28
DDX55-207ENST00000540763 RASL11AQ6T310 242 aa13.31□□□□□ -0.28
DDX55-207ENST00000540763 NBDYA0A0U1RRE5 68 aa13.3□□□□□ -0.28
DDX55-207ENST00000540763 K7EP13 123 aa13.3□□□□□ -0.28
DDX55-207ENST00000540763 SREK1IP1Q8N9Q2 155 aaPredicted RBP13.3□□□□□ -0.28
DDX55-207ENST00000540763 IGLV2-18A0A075B6J9 118 aa13.29□□□□□ -0.28
DDX55-207ENST00000540763 TRAV8-6A0A0B4J262 113 aa13.29□□□□□ -0.28
DDX55-207ENST00000540763 S100A8P05109 93 aa13.29□□□□□ -0.28
DDX55-207ENST00000540763 ATP5L2Q7Z4Y8 100 aa13.29□□□□□ -0.28
DDX55-207ENST00000540763 CTDSP1Q9GZU7 261 aa13.29□□□□□ -0.28
DDX55-207ENST00000540763 NIT2Q9NQR4 276 aa13.29□□□□□ -0.28
DDX55-207ENST00000540763 TMEM97Q5BJF2 176 aa13.28□□□□□ -0.28
DDX55-207ENST00000540763 DAZ4Q86SG3 579 aaKnown RBP13.28□□□□□ -0.28
DDX55-207ENST00000540763 IMMP2LQ96T52 175 aa13.28□□□□□ -0.28
DDX55-207ENST00000540763 DAZ3Q9NR90 486 aaKnown RBP13.28□□□□□ -0.28
DDX55-207ENST00000540763 TNFRSF18Q9Y5U5 241 aa13.28□□□□□ -0.28
DDX55-207ENST00000540763 A0A1B0GXF2 115 aa13.27□□□□□ -0.29
DDX55-207ENST00000540763 DNAH10OSP0CZ25 163 aa13.27□□□□□ -0.29
DDX55-207ENST00000540763 BTF3P20290 206 aaKnown RBP13.27□□□□□ -0.29
DDX55-207ENST00000540763 HBBP68871 147 aa13.27□□□□□ -0.29
DDX55-207ENST00000540763 WFDC10BQ8IUB3 73 aa13.27□□□□□ -0.29
DDX55-207ENST00000540763 GATD1Q8NB37 220 aa13.27□□□□□ -0.29
DDX55-207ENST00000540763 OR10J3Q5JRS4 329 aa13.26□□□□□ -0.29
DDX55-207ENST00000540763 MRAP2Q96G30 205 aa13.26□□□□□ -0.29
DDX55-207ENST00000540763 IGHV3-38A0A0C4DH36 116 aa13.25□□□□□ -0.29
DDX55-207ENST00000540763 RHEBQ15382 184 aa13.25□□□□□ -0.29
DDX55-207ENST00000540763 RNF185Q96GF1 192 aa13.25□□□□□ -0.29
DDX55-207ENST00000540763 TMEM242Q9NWH2 141 aa13.25□□□□□ -0.29
DDX55-207ENST00000540763 M0R2N4 97 aa13.24□□□□□ -0.29
DDX55-207ENST00000540763 RAB4AP20338 218 aa13.24□□□□□ -0.29
DDX55-207ENST00000540763 LINC01556Q5JQF7 62 aa13.24□□□□□ -0.29
DDX55-207ENST00000540763 MRPL54Q6P161 138 aaKnown RBP13.24□□□□□ -0.29
DDX55-207ENST00000540763 AMN1Q8IY45 258 aa13.24□□□□□ -0.29
DDX55-207ENST00000540763 TRAV9-2A0A087WT02 112 aa13.23□□□□□ -0.29
DDX55-207ENST00000540763 TRAV26-2A0A0B4J265 109 aa13.23□□□□□ -0.29
DDX55-207ENST00000540763 CAMPP49913 170 aa13.23□□□□□ -0.29
DDX55-207ENST00000540763 NDUFA5Q16718 116 aa13.23□□□□□ -0.29
DDX55-207ENST00000540763 FAM104BQ5XKR9 115 aa13.23□□□□□ -0.29
DDX55-207ENST00000540763 C10orf126Q8N4M7 172 aa13.23□□□□□ -0.29
DDX55-207ENST00000540763 CLRN3Q8NCR9 226 aa13.23□□□□□ -0.29
DDX55-207ENST00000540763 BTF3L4Q96K17 158 aa13.23□□□□□ -0.29
DDX55-207ENST00000540763 TRAV9-1A0A075B6T8 112 aa13.22□□□□□ -0.29
DDX55-207ENST00000540763 TRBV6-8A0A0A6YYG3 113 aa13.22□□□□□ -0.29
DDX55-207ENST00000540763 TRBV6-5A0A0K0K1A5 114 aa13.22□□□□□ -0.29
DDX55-207ENST00000540763 KCNIP4Q6PIL6 250 aa13.22□□□□□ -0.29
DDX55-207ENST00000540763 PPP1R17O96001 155 aa13.21□□□□□ -0.29
DDX55-207ENST00000540763 KRTAP1-5Q9BYS1 174 aa13.21□□□□□ -0.29
DDX55-207ENST00000540763 FRAS1Q86XX4 4008 aa13.21□□□□□ -0.29
DDX55-207ENST00000540763 C7orf77A4D0Y5 90 aa13.2□□□□□ -0.3
DDX55-207ENST00000540763 C1orf134Q5TEV5 83 aa13.2□□□□□ -0.3
DDX55-207ENST00000540763 SVBPQ8N300 66 aa13.2□□□□□ -0.3
DDX55-207ENST00000540763 CHCHD7Q9BUK0 85 aa13.2□□□□□ -0.3
DDX55-207ENST00000540763 PKIAP61925 76 aa13.19□□□□□ -0.3
DDX55-207ENST00000540763 C6orf223Q8N319 242 aa13.19□□□□□ -0.3
DDX55-207ENST00000540763 RPL39LQ96EH5 51 aaKnown RBP13.19□□□□□ -0.3
DDX55-207ENST00000540763 SNAPINO95295 136 aa13.18□□□□□ -0.3
DDX55-207ENST00000540763 APOC3P02656 99 aa13.18□□□□□ -0.3
DDX55-207ENST00000540763 IQCJQ1A5X6 159 aa13.18□□□□□ -0.3
DDX55-207ENST00000540763 NTM-AS1Q6ZSK4 140 aa13.18□□□□□ -0.3
DDX55-207ENST00000540763 LINC00336Q6ZUF6 198 aa13.18□□□□□ -0.3
DDX55-207ENST00000540763 NIT1Q86X76 327 aa13.18□□□□□ -0.3
DDX55-207ENST00000540763 KRTAP17-1Q9BYP8 105 aa13.18□□□□□ -0.3
DDX55-207ENST00000540763 TRBV25-1A0A075B6N4 114 aa13.17□□□□□ -0.3
DDX55-207ENST00000540763 SDHAF1A6NFY7 115 aa13.17□□□□□ -0.3
DDX55-207ENST00000540763 S100PP25815 95 aa13.17□□□□□ -0.3
DDX55-207ENST00000540763 MRPL51Q4U2R6 128 aaKnown RBP13.17□□□□□ -0.3
DDX55-207ENST00000540763 IGHV1-24A0A0C4DH33 117 aa13.16□□□□□ -0.3
DDX55-207ENST00000540763 NCR2O95944 276 aa13.16□□□□□ -0.3
DDX55-207ENST00000540763 PPBPP02775 128 aa13.16□□□□□ -0.3
DDX55-207ENST00000540763 COTL1Q14019 142 aa13.16□□□□□ -0.3
DDX55-207ENST00000540763 LAGE3Q14657 143 aa13.16□□□□□ -0.3
DDX55-207ENST00000540763 ST20Q9HBF5 79 aa13.16□□□□□ -0.3
DDX55-207ENST00000540763 RPS10P5Q9NQ39 176 aa13.16□□□□□ -0.3
DDX55-207ENST00000540763 URGCP-MRPS24S4R325 110 aa13.16□□□□□ -0.3
DDX55-207ENST00000540763 RTL8CO15255 209 aa13.15□□□□□ -0.3
DDX55-207ENST00000540763 GAS8-AS1O95177 125 aa13.15□□□□□ -0.3
DDX55-207ENST00000540763 RPS10P46783 165 aaKnown RBP13.15□□□□□ -0.3
DDX55-207ENST00000540763 NRACQ8N912 160 aa13.15□□□□□ -0.3
DDX55-207ENST00000540763 TRBV24-1A0A075B6N3 115 aa13.14□□□□□ -0.31
DDX55-207ENST00000540763 CKS2P33552 79 aa13.14□□□□□ -0.31
DDX55-207ENST00000540763 NFE4Q86UQ8 179 aa13.14□□□□□ -0.31
DDX55-207ENST00000540763 TMEM70Q9BUB7 260 aa13.14□□□□□ -0.31
DDX55-207ENST00000540763 TRBV27A0A0K0K1C4 114 aa13.13□□□□□ -0.31
DDX55-207ENST00000540763 IBA57-AS1B1ANH7 110 aa13.13□□□□□ -0.31
DDX55-207ENST00000540763 I3L3M4 83 aa13.13□□□□□ -0.31
DDX55-207ENST00000540763 PHOX2AO14813 284 aa13.13□□□□□ -0.31
DDX55-207ENST00000540763 IGHV3-30P01768 117 aa13.13□□□□□ -0.31
DDX55-207ENST00000540763 IGHV3-33P01772 117 aa13.13□□□□□ -0.31
DDX55-207ENST00000540763 IGHV3-30-3P0DP02 117 aa13.13□□□□□ -0.31
DDX55-207ENST00000540763 IGHV3-30-5P0DP03 117 aa13.13□□□□□ -0.31
DDX55-207ENST00000540763 POLR2KP53803 58 aaKnown RBP13.13□□□□□ -0.31
DDX55-207ENST00000540763 A0A087WX48 190 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 60.7 ms