RNA–Protein interactions for RNA: ENST00000540367.5

CPT1A-206, Transcript of carnitine palmitoyltransferase 1A, humanhuman

TSL 1 (best) BASIC

Gene CPT1A, Length 2,496 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPT1A-206ENST00000540367 SRD5A1P18405 259 aa8.38□□□□□ -1.07
CPT1A-206ENST00000540367 TMEM263Q8WUH6 116 aaKnown RBP8.38□□□□□ -1.07
CPT1A-206ENST00000540367 CITED1Q99966 193 aa8.38□□□□□ -1.07
CPT1A-206ENST00000540367 USP24Q9UPU5 2620 aa8.37□□□□□ -1.07
CPT1A-206ENST00000540367 ABCA2Q9BZC7 2435 aa8.37□□□□□ -1.07
CPT1A-206ENST00000540367 TMEM223A0PJW6 202 aa8.37□□□□□ -1.07
CPT1A-206ENST00000540367 C9JAW5 83 aa8.37□□□□□ -1.07
CPT1A-206ENST00000540367 P0DMU3 169 aa8.37□□□□□ -1.07
CPT1A-206ENST00000540367 FAM231AP0DMU4 169 aa8.37□□□□□ -1.07
CPT1A-206ENST00000540367 FAM231CP0DMU5 169 aa8.37□□□□□ -1.07
CPT1A-206ENST00000540367 BRD3OSQ6XYD6 125 aa8.37□□□□□ -1.07
CPT1A-206ENST00000540367 RAX2Q96IS3 184 aa8.37□□□□□ -1.07
CPT1A-206ENST00000540367 BPESC1Q9GZL8 116 aa8.37□□□□□ -1.07
CPT1A-206ENST00000540367 SS18L2Q9UHA2 77 aa8.37□□□□□ -1.07
CPT1A-206ENST00000540367 EPG5Q9HCE0 2579 aa8.36□□□□□ -1.07
CPT1A-206ENST00000540367 LMO4P61968 165 aa8.36□□□□□ -1.07
CPT1A-206ENST00000540367 NSUN5P1Q3KNT7 163 aa8.36□□□□□ -1.07
CPT1A-206ENST00000540367 TRPT1Q86TN4 253 aaKnown RBP8.36□□□□□ -1.07
CPT1A-206ENST00000540367 RHPN1-AS1Q9BWJ2 59 aa8.36□□□□□ -1.07
CPT1A-206ENST00000540367 GATA3P23771 443 aa8.36□□□□□ -1.07
CPT1A-206ENST00000540367 RHOHQ15669 191 aa8.36□□□□□ -1.07
CPT1A-206ENST00000540367 USMG5Q96IX5 58 aa8.36□□□□□ -1.07
CPT1A-206ENST00000540367 SPANXA1Q9NS26 97 aa8.36□□□□□ -1.07
CPT1A-206ENST00000540367 LRRK2Q5S007 2527 aa8.35□□□□□ -1.07
CPT1A-206ENST00000540367 ZNF462Q96JM2 2506 aa8.35□□□□□ -1.07
CPT1A-206ENST00000540367 RHODO00212 210 aa8.35□□□□□ -1.07
CPT1A-206ENST00000540367 SNCGO76070 127 aa8.35□□□□□ -1.07
CPT1A-206ENST00000540367 GNLYP22749 145 aa8.35□□□□□ -1.07
CPT1A-206ENST00000540367 SPXQ9BT56 116 aa8.35□□□□□ -1.07
CPT1A-206ENST00000540367 ZNF256Q9Y2P7 627 aaPredicted RBP8.35□□□□□ -1.07
CPT1A-206ENST00000540367 FAM208BQ5VWN6 2430 aa8.35□□□□□ -1.07
CPT1A-206ENST00000540367 TRAV2A0A0B4J234 112 aa8.35□□□□□ -1.07
CPT1A-206ENST00000540367 H3BUA1 57 aa8.35□□□□□ -1.07
CPT1A-206ENST00000540367 BRI3O95415 125 aa8.35□□□□□ -1.07
CPT1A-206ENST00000540367 IGHV3-11P01762 117 aa8.35□□□□□ -1.07
CPT1A-206ENST00000540367 ZNF22P17026 224 aaPredicted RBP8.35□□□□□ -1.07
CPT1A-206ENST00000540367 UCNP55089 124 aa8.35□□□□□ -1.07
CPT1A-206ENST00000540367 GAGE2BQ13066 116 aa8.35□□□□□ -1.07
CPT1A-206ENST00000540367 GAGE2EQ4V326 116 aa8.35□□□□□ -1.07
CPT1A-206ENST00000540367 FAM74A4Q5TZK3 123 aa8.35□□□□□ -1.07
CPT1A-206ENST00000540367 MUSTN1Q8IVN3 82 aa8.35□□□□□ -1.07
CPT1A-206ENST00000540367 OPRPNQ99935 248 aaPredicted RBP8.35□□□□□ -1.07
CPT1A-206ENST00000540367 GAGE2DQ9UEU5 116 aa8.35□□□□□ -1.07
CPT1A-206ENST00000540367 TRAV16A0A0A6YYK6 109 aaPredicted RBP8.34□□□□□ -1.07
CPT1A-206ENST00000540367 A0A0J9YX75 114 aa8.34□□□□□ -1.07
CPT1A-206ENST00000540367 Q6Q795 121 aa8.34□□□□□ -1.07
CPT1A-206ENST00000540367 C9orf85Q96MD7 179 aa8.34□□□□□ -1.07
CPT1A-206ENST00000540367 TRAV12-3A0A0B4J271 114 aa8.34□□□□□ -1.08
CPT1A-206ENST00000540367 M0QY20 66 aa8.34□□□□□ -1.08
CPT1A-206ENST00000540367 EDN2P20800 178 aa8.34□□□□□ -1.08
CPT1A-206ENST00000540367 LINC01600Q96MT4 127 aa8.34□□□□□ -1.08
CPT1A-206ENST00000540367 MDFICQ9P1T7 246 aa8.34□□□□□ -1.08
CPT1A-206ENST00000540367 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP8.33□□□□□ -1.081e-5■■■■□ 21.5
CPT1A-206ENST00000540367 H7C2G1 150 aa8.33□□□□□ -1.08
CPT1A-206ENST00000540367 M0R2P5 195 aa8.33□□□□□ -1.08
CPT1A-206ENST00000540367 ATXN8Q156A1 80 aa8.33□□□□□ -1.08
CPT1A-206ENST00000540367 ZNF56Q15929 161 aa8.33□□□□□ -1.08
CPT1A-206ENST00000540367 LY6EQ16553 131 aa8.33□□□□□ -1.08
CPT1A-206ENST00000540367 DAZ1Q9NQZ3 744 aaKnown RBP8.33□□□□□ -1.08
CPT1A-206ENST00000540367 USP9YO00507 2555 aaPredicted RBP8.33□□□□□ -1.08
CPT1A-206ENST00000540367 IGHV3-16A0A0C4DH30 117 aa8.32□□□□□ -1.08
CPT1A-206ENST00000540367 B5MCH6 92 aa8.32□□□□□ -1.08
CPT1A-206ENST00000540367 ID1P41134 155 aa8.32□□□□□ -1.08
CPT1A-206ENST00000540367 NDUFV3P56181 108 aaKnown RBP8.32□□□□□ -1.08
CPT1A-206ENST00000540367 LINC01620Q4KN68 170 aa8.32□□□□□ -1.08
CPT1A-206ENST00000540367 C20orf203Q8NBC4 194 aa8.32□□□□□ -1.08
CPT1A-206ENST00000540367 NTN5Q8WTR8 489 aaPredicted RBP8.32□□□□□ -1.08
CPT1A-206ENST00000540367 IGHV3-64A0A075B6Q5 118 aa8.32□□□□□ -1.08
CPT1A-206ENST00000540367 GAGE12JA6NER3 117 aa8.32□□□□□ -1.08
CPT1A-206ENST00000540367 GAGE7O76087 117 aa8.32□□□□□ -1.08
CPT1A-206ENST00000540367 ELANEP08246 267 aa8.32□□□□□ -1.08
CPT1A-206ENST00000540367 GAGE12FP0CL80 117 aa8.32□□□□□ -1.08
CPT1A-206ENST00000540367 GAGE12GP0CL81 117 aa8.32□□□□□ -1.08
CPT1A-206ENST00000540367 GAGE12IP0CL82 117 aa8.32□□□□□ -1.08
CPT1A-206ENST00000540367 GAGE4Q13068 117 aa8.32□□□□□ -1.08
CPT1A-206ENST00000540367 Q1RN00 199 aa8.32□□□□□ -1.08
CPT1A-206ENST00000540367 Q8N1Y9 231 aa8.32□□□□□ -1.08
CPT1A-206ENST00000540367 CSPG4Q6UVK1 2322 aa8.32□□□□□ -1.08
CPT1A-206ENST00000540367 IGHG2P01859 326 aa8.31□□□□□ -1.08
CPT1A-206ENST00000540367 NHLRC4P0CG21 123 aaPredicted RBP8.31□□□□□ -1.08
CPT1A-206ENST00000540367 DCANP1Q8TF63 244 aa8.31□□□□□ -1.08
CPT1A-206ENST00000540367 ABCA12Q86UK0 2595 aa8.31□□□□□ -1.08
CPT1A-206ENST00000540367 IGLV4-3A0A075B6K6 122 aa8.31□□□□□ -1.08
CPT1A-206ENST00000540367 A0A0J9YXV3 536 aa8.31□□□□□ -1.08
CPT1A-206ENST00000540367 A0A0J9YXY3 114 aa8.31□□□□□ -1.08
CPT1A-206ENST00000540367 TRBV30A0A0K0K1B3 111 aa8.31□□□□□ -1.08
CPT1A-206ENST00000540367 IFITM1P13164 125 aa8.31□□□□□ -1.08
CPT1A-206ENST00000540367 RPL13AP40429 203 aaKnown RBP8.31□□□□□ -1.08
CPT1A-206ENST00000540367 TTC32Q5I0X7 151 aa8.31□□□□□ -1.08
CPT1A-206ENST00000540367 HERV-K104P63124 156 aa8.3□□□□□ -1.08
CPT1A-206ENST00000540367 ODF3Q96PU9 254 aa8.3□□□□□ -1.08
CPT1A-206ENST00000540367 PRORYQ9H606 182 aa8.3□□□□□ -1.08
CPT1A-206ENST00000540367 DOPEY2Q9Y3R5 2298 aa8.3□□□□□ -1.08
CPT1A-206ENST00000540367 TRBV10-2A0A0K0K1G8 114 aa8.3□□□□□ -1.08
CPT1A-206ENST00000540367 I3L3M4 83 aa8.3□□□□□ -1.08
CPT1A-206ENST00000540367 FAM110AQ9BQ89 295 aa8.3□□□□□ -1.08
CPT1A-206ENST00000540367 ZNF580Q9UK33 172 aa8.3□□□□□ -1.08
CPT1A-206ENST00000540367 TRAV4A0A0B4J268 109 aa8.29□□□□□ -1.08
CPT1A-206ENST00000540367 TRIAP1O43715 76 aa8.29□□□□□ -1.08
CPT1A-206ENST00000540367 IGHV4-39P01824 125 aa8.29□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 73.5 ms