RNA–Protein interactions for RNA: ENST00000540159.3

BNIP3-202, Transcript of BCL2 interacting protein 3, humanhuman

TSL 1 (best)

Gene BNIP3, Length 3,066 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BNIP3-202ENST00000540159 ITPR2Q14571 2701 aa10.12□□□□□ -0.79
BNIP3-202ENST00000540159 NBEAL2Q6ZNJ1 2754 aa10.12□□□□□ -0.79
BNIP3-202ENST00000540159 IGLV4-69A0A075B6H9 119 aa10.12□□□□□ -0.79
BNIP3-202ENST00000540159 TRAV12-1A0A0B4J245 112 aa10.12□□□□□ -0.79
BNIP3-202ENST00000540159 IGHV3-16A0A0C4DH30 117 aa10.12□□□□□ -0.79
BNIP3-202ENST00000540159 H3BUA1 57 aa10.12□□□□□ -0.79
BNIP3-202ENST00000540159 RBMY1A1P0DJD3 496 aaKnown RBP10.12□□□□□ -0.79
BNIP3-202ENST00000540159 RBMY1CP0DJD4 496 aa10.12□□□□□ -0.79
BNIP3-202ENST00000540159 RBMY1FQ15415 496 aaKnown RBP10.12□□□□□ -0.79
BNIP3-202ENST00000540159 TCTEX1D4Q5JR98 221 aa10.12□□□□□ -0.79
BNIP3-202ENST00000540159 MORN3Q6PF18 240 aaPredicted RBP10.12□□□□□ -0.79
BNIP3-202ENST00000540159 OR5A1Q8NGJ0 315 aa10.12□□□□□ -0.79
BNIP3-202ENST00000540159 IGHV3OR16-12A0A075B7B8 117 aa10.11□□□□□ -0.79
BNIP3-202ENST00000540159 COTL1Q14019 142 aa10.11□□□□□ -0.79
BNIP3-202ENST00000540159 APRG1Q8IVJ8 170 aa10.11□□□□□ -0.79
BNIP3-202ENST00000540159 POLR2KP53803 58 aaKnown RBP10.1□□□□□ -0.79
BNIP3-202ENST00000540159 ZNF418Q8TF45 676 aaPredicted RBP10.1□□□□□ -0.79
BNIP3-202ENST00000540159 A0A1W2PRX2 142 aa10.1□□□□□ -0.79
BNIP3-202ENST00000540159 E9PLD3 99 aa10.1□□□□□ -0.79
BNIP3-202ENST00000540159 G3V4G9 280 aa10.1□□□□□ -0.79
BNIP3-202ENST00000540159 LINC01356Q8N9X3 169 aa10.1□□□□□ -0.79
BNIP3-202ENST00000540159 IGHV1OR15-1A0A075B7D0 117 aa10.1□□□□□ -0.79
BNIP3-202ENST00000540159 IGHV3-38A0A0C4DH36 116 aa10.1□□□□□ -0.79
BNIP3-202ENST00000540159 IGIPA6NJ69 53 aa10.1□□□□□ -0.79
BNIP3-202ENST00000540159 VCYO14598 125 aa10.1□□□□□ -0.79
BNIP3-202ENST00000540159 FOXI2Q6ZQN5 318 aa10.1□□□□□ -0.79
BNIP3-202ENST00000540159 ATP6V0BQ99437 205 aa10.1□□□□□ -0.79
BNIP3-202ENST00000540159 GTSF1LQ9H1H1 148 aa10.1□□□□□ -0.79
BNIP3-202ENST00000540159 HIVEP2P31629 2446 aa10.09□□□□□ -0.79
BNIP3-202ENST00000540159 PMVKQ15126 192 aa10.09□□□□□ -0.79
BNIP3-202ENST00000540159 K7EQG2 157 aa10.09□□□□□ -0.79
BNIP3-202ENST00000540159 BBC3Q96PG8 261 aaPredicted RBP10.08□□□□□ -0.8
BNIP3-202ENST00000540159 M0QY20 66 aa10.08□□□□□ -0.8
BNIP3-202ENST00000540159 UBR5O95071 2799 aaPredicted RBP10.08□□□□□ -0.8
BNIP3-202ENST00000540159 PSMB2P49721 201 aa10.08□□□□□ -0.8
BNIP3-202ENST00000540159 NPC2P61916 151 aa10.08□□□□□ -0.8
BNIP3-202ENST00000540159 RRN3P1Q2M238 152 aa10.08□□□□□ -0.8
BNIP3-202ENST00000540159 PTH2Q96A98 100 aa10.08□□□□□ -0.8
BNIP3-202ENST00000540159 A0A0J9YXV3 536 aa10.08□□□□□ -0.8
BNIP3-202ENST00000540159 K7EMT4 169 aa10.07□□□□□ -0.8
BNIP3-202ENST00000540159 HIST2H2BCQ6DN03 193 aa10.07□□□□□ -0.8
BNIP3-202ENST00000540159 GCN1Q92616 2671 aaKnown RBP10.07□□□□□ -0.8
BNIP3-202ENST00000540159 A8MZ25 164 aa10.07□□□□□ -0.8
BNIP3-202ENST00000540159 RAX2Q96IS3 184 aa10.07□□□□□ -0.8
BNIP3-202ENST00000540159 SPXQ9BT56 116 aa10.07□□□□□ -0.8
BNIP3-202ENST00000540159 A0A1B0GWB2 263 aa10.06□□□□□ -0.8
BNIP3-202ENST00000540159 TMEM61Q8N0U2 210 aa10.06□□□□□ -0.8
BNIP3-202ENST00000540159 SYT8Q8NBV8 401 aa10.06□□□□□ -0.8
BNIP3-202ENST00000540159 VPREB3Q9UKI3 123 aa10.06□□□□□ -0.8
BNIP3-202ENST00000540159 TSSC4Q9Y5U2 329 aaPredicted RBP10.06□□□□□ -0.8
BNIP3-202ENST00000540159 TRAV2A0A0B4J234 112 aa10.05□□□□□ -0.8
BNIP3-202ENST00000540159 MED14OSP0DP75 135 aa10.05□□□□□ -0.8
BNIP3-202ENST00000540159 COX6B1P14854 86 aa10.05□□□□□ -0.8
BNIP3-202ENST00000540159 SMAGPQ0VAQ4 97 aa10.05□□□□□ -0.8
BNIP3-202ENST00000540159 GAGE13Q4V321 117 aa10.05□□□□□ -0.8
BNIP3-202ENST00000540159 C9orf85Q96MD7 179 aa10.05□□□□□ -0.8
BNIP3-202ENST00000540159 SPAG8Q99932 426 aaPredicted RBP10.05□□□□□ -0.8
BNIP3-202ENST00000540159 NXPH4O95158 308 aa10.05□□□□□ -0.8
BNIP3-202ENST00000540159 PPP1R17O96001 155 aa10.05□□□□□ -0.8
BNIP3-202ENST00000540159 ZNF702PQ9H963 129 aa10.05□□□□□ -0.8
BNIP3-202ENST00000540159 HERVK_113P61574 105 aa10.05□□□□□ -0.8
BNIP3-202ENST00000540159 TENM4Q6N022 2769 aa10.04□□□□□ -0.8
BNIP3-202ENST00000540159 TRAV8-3A0A0A6YYJ7 113 aa10.04□□□□□ -0.8
BNIP3-202ENST00000540159 A0A0J9YY99 117 aa10.04□□□□□ -0.8
BNIP3-202ENST00000540159 LGALS3P17931 250 aaKnown RBP10.04□□□□□ -0.8
BNIP3-202ENST00000540159 Q6ZSN1 163 aa10.04□□□□□ -0.8
BNIP3-202ENST00000540159 IGKV2D-29A0A075B6S2 120 aaPredicted RBP10.03□□□□□ -0.8
BNIP3-202ENST00000540159 TRBV27A0A0K0K1C4 114 aa10.03□□□□□ -0.8
BNIP3-202ENST00000540159 IGKV2-29A2NJV5 120 aaPredicted RBP10.03□□□□□ -0.8
BNIP3-202ENST00000540159 RBMY1BA6NDE4 496 aaKnown RBP10.03□□□□□ -0.8
BNIP3-202ENST00000540159 RBMY1EA6NEQ0 496 aaKnown RBP10.03□□□□□ -0.8
BNIP3-202ENST00000540159 J3QQQ9 107 aa10.03□□□□□ -0.8
BNIP3-202ENST00000540159 LGALS9O00182 355 aa10.03□□□□□ -0.8
BNIP3-202ENST00000540159 TSPAN13O95857 204 aa10.03□□□□□ -0.8
BNIP3-202ENST00000540159 RBMY1DP0C7P1 496 aaKnown RBP10.03□□□□□ -0.8
BNIP3-202ENST00000540159 UBE2E2Q96LR5 201 aa10.03□□□□□ -0.8
BNIP3-202ENST00000540159 CR1P17927 2039 aa10.03□□□□□ -0.8
BNIP3-202ENST00000540159 XCL2Q9UBD3 114 aa10.03□□□□□ -0.8
BNIP3-202ENST00000540159 SPANXB1Q9NS25 103 aaPredicted RBP10.03□□□□□ -0.8
BNIP3-202ENST00000540159 SCGB1C2P0DMR2 95 aa10.02□□□□□ -0.81
BNIP3-202ENST00000540159 CD28P10747 220 aa10.02□□□□□ -0.81
BNIP3-202ENST00000540159 TAL2Q16559 108 aa10.02□□□□□ -0.81
BNIP3-202ENST00000540159 VCX2Q9H322 139 aa10.02□□□□□ -0.81
BNIP3-202ENST00000540159 HELZ2Q9BYK8 2649 aaKnown RBP10.02□□□□□ -0.81
BNIP3-202ENST00000540159 DLX4Q92988 240 aaPredicted RBP10.02□□□□□ -0.81
BNIP3-202ENST00000540159 Q96MF0 132 aa10.02□□□□□ -0.81
BNIP3-202ENST00000540159 BRI3O95415 125 aa10.01□□□□□ -0.81
BNIP3-202ENST00000540159 IGHV3-53P01767 116 aa10.01□□□□□ -0.81
BNIP3-202ENST00000540159 Q5PR19 223 aa10.01□□□□□ -0.81
BNIP3-202ENST00000540159 TRPT1Q86TN4 253 aaKnown RBP10.01□□□□□ -0.81
BNIP3-202ENST00000540159 LINC01587Q99440 93 aa10.01□□□□□ -0.81
BNIP3-202ENST00000540159 PRSS2P07478 247 aa10.01□□□□□ -0.81
BNIP3-202ENST00000540159 IGHV4-31P0DP07 118 aa10.01□□□□□ -0.81
BNIP3-202ENST00000540159 DYNLRB2Q8TF09 96 aa10.01□□□□□ -0.81
BNIP3-202ENST00000540159 A0A096LNT2 108 aa10.01□□□□□ -0.81
BNIP3-202ENST00000540159 TRBV7-9A0A0J9YWB2 115 aa10.01□□□□□ -0.81
BNIP3-202ENST00000540159 A0A0U1RRA0 63 aa10.01□□□□□ -0.81
BNIP3-202ENST00000540159 I3L3M4 83 aa10□□□□□ -0.81
BNIP3-202ENST00000540159 C20orf203Q8NBC4 194 aa10□□□□□ -0.81
BNIP3-202ENST00000540159 IGLV4-3A0A075B6K6 122 aa10□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 63.6 ms