RNA–Protein interactions for RNA: ENST00000539493.2

RAB3GAP1-207, Transcript of RAB3 GTPase activating protein catalytic subunit 1, humanhuman

TSL 5 BASIC

Gene RAB3GAP1, Length 3,161 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3GAP1-207ENST00000539493 DLX1P56177 255 aa4.32□□□□□ -1.72
RAB3GAP1-207ENST00000539493 ASH1LQ9NR48 2969 aaKnown RBP4.32□□□□□ -1.72
RAB3GAP1-207ENST00000539493 IGHV3OR16-10A0A075B7F0 116 aa4.31□□□□□ -1.72
RAB3GAP1-207ENST00000539493 SDHAF1A6NFY7 115 aa4.31□□□□□ -1.72
RAB3GAP1-207ENST00000539493 E7EUB6 86 aa4.31□□□□□ -1.72
RAB3GAP1-207ENST00000539493 IGLV2-23P01705 113 aa4.31□□□□□ -1.72
RAB3GAP1-207ENST00000539493 C11orf71Q6IPW1 123 aa4.31□□□□□ -1.72
RAB3GAP1-207ENST00000539493 LINC00305Q7Z4B0 112 aa4.31□□□□□ -1.72
RAB3GAP1-207ENST00000539493 STHQ8IWL8 128 aa4.31□□□□□ -1.72
RAB3GAP1-207ENST00000539493 NDUFA4L2Q9NRX3 87 aa4.31□□□□□ -1.72
RAB3GAP1-207ENST00000539493 USP17L23D6RBM5 183 aa4.31□□□□□ -1.72
RAB3GAP1-207ENST00000539493 IGLV1-47P01700 117 aa4.31□□□□□ -1.72
RAB3GAP1-207ENST00000539493 IGHV4-39P01824 125 aa4.31□□□□□ -1.72
RAB3GAP1-207ENST00000539493 PRB3Q04118 309 aaPredicted RBP4.31□□□□□ -1.72
RAB3GAP1-207ENST00000539493 WFDC11Q8NEX6 87 aa4.31□□□□□ -1.72
RAB3GAP1-207ENST00000539493 TMEM167AQ8TBQ9 72 aa4.31□□□□□ -1.72
RAB3GAP1-207ENST00000539493 VSIG2Q96IQ7 327 aa4.31□□□□□ -1.72
RAB3GAP1-207ENST00000539493 VPS13CQ709C8 3753 aa4.3□□□□□ -1.72
RAB3GAP1-207ENST00000539493 CGB1A6NKQ9 187 aa4.3□□□□□ -1.72
RAB3GAP1-207ENST00000539493 COX6CP09669 75 aa4.3□□□□□ -1.72
RAB3GAP1-207ENST00000539493 KLKP1Q107X0 134 aa4.3□□□□□ -1.72
RAB3GAP1-207ENST00000539493 RHOHQ15669 191 aa4.3□□□□□ -1.72
RAB3GAP1-207ENST00000539493 LYPD5Q6UWN5 251 aa4.3□□□□□ -1.72
RAB3GAP1-207ENST00000539493 TMEM243Q9BU79 118 aa4.3□□□□□ -1.72
RAB3GAP1-207ENST00000539493 RETNQ9HD89 108 aa4.3□□□□□ -1.72
RAB3GAP1-207ENST00000539493 TPRP12270 2363 aaKnown RBP4.3□□□□□ -1.72
RAB3GAP1-207ENST00000539493 IGLV4-69A0A075B6H9 119 aa4.3□□□□□ -1.72
RAB3GAP1-207ENST00000539493 IGHV3-72A0A0B4J1Y9 119 aa4.3□□□□□ -1.72
RAB3GAP1-207ENST00000539493 WT1-ASQ06250 92 aa4.3□□□□□ -1.72
RAB3GAP1-207ENST00000539493 MRGPRG-AS1Q2M3A8 158 aa4.3□□□□□ -1.72
RAB3GAP1-207ENST00000539493 ORMDL2Q53FV1 153 aa4.3□□□□□ -1.72
RAB3GAP1-207ENST00000539493 C10orf55Q5SWW7 151 aa4.3□□□□□ -1.72
RAB3GAP1-207ENST00000539493 PRNTQ86SH4 94 aa4.3□□□□□ -1.72
RAB3GAP1-207ENST00000539493 BRK1Q8WUW1 75 aa4.3□□□□□ -1.72
RAB3GAP1-207ENST00000539493 CSMD1Q96PZ7 3565 aa4.3□□□□□ -1.72
RAB3GAP1-207ENST00000539493 UBE2D4Q9Y2X8 147 aa4.3□□□□□ -1.72
RAB3GAP1-207ENST00000539493 ABCA4P78363 2273 aa4.3□□□□□ -1.72
RAB3GAP1-207ENST00000539493 TNCP24821 2201 aa4.3□□□□□ -1.72
RAB3GAP1-207ENST00000539493 A0A1W2PPR1 153 aa4.3□□□□□ -1.72
RAB3GAP1-207ENST00000539493 PLAC8L1A1L4L8 177 aa4.3□□□□□ -1.72
RAB3GAP1-207ENST00000539493 IBA57-AS1B1ANH7 110 aa4.3□□□□□ -1.72
RAB3GAP1-207ENST00000539493 BUB1B-PAK6H3BSN5 160 aa4.3□□□□□ -1.72
RAB3GAP1-207ENST00000539493 INAFM2P0DMQ5 153 aa4.3□□□□□ -1.72
RAB3GAP1-207ENST00000539493 SUB1P53999 127 aaKnown RBP eCLIP4.3□□□□□ -1.721e-6■■□□□ 12.7
RAB3GAP1-207ENST00000539493 MLANAQ16655 118 aa4.3□□□□□ -1.72
RAB3GAP1-207ENST00000539493 NSUN5P1Q3KNT7 163 aa4.3□□□□□ -1.72
RAB3GAP1-207ENST00000539493 SLC50A1Q9BRV3 221 aa4.3□□□□□ -1.72
RAB3GAP1-207ENST00000539493 DAZ1Q9NQZ3 744 aaKnown RBP4.3□□□□□ -1.72
RAB3GAP1-207ENST00000539493 BEX4Q9NWD9 120 aaPredicted RBP4.3□□□□□ -1.72
RAB3GAP1-207ENST00000539493 COL6A6A6NMZ7 2263 aa4.29□□□□□ -1.72
RAB3GAP1-207ENST00000539493 IGHV1-3A0A0C4DH29 117 aa4.29□□□□□ -1.72
RAB3GAP1-207ENST00000539493 ERHP84090 104 aaKnown RBP4.29□□□□□ -1.72
RAB3GAP1-207ENST00000539493 BEAN1Q3B7T3 259 aa4.29□□□□□ -1.72
RAB3GAP1-207ENST00000539493 LY6G5BQ8NDX9 201 aa4.29□□□□□ -1.72
RAB3GAP1-207ENST00000539493 C22orf24Q9Y442 160 aa4.29□□□□□ -1.72
RAB3GAP1-207ENST00000539493 CACNA1AO00555 2505 aa4.29□□□□□ -1.72
RAB3GAP1-207ENST00000539493 MALRD1Q5VYJ5 2156 aa4.29□□□□□ -1.72
RAB3GAP1-207ENST00000539493 IGHV4-4A0A075B6R2 117 aa4.29□□□□□ -1.72
RAB3GAP1-207ENST00000539493 FAM223BA6NKX1 122 aa4.29□□□□□ -1.72
RAB3GAP1-207ENST00000539493 GAS8-AS1O95177 125 aa4.29□□□□□ -1.72
RAB3GAP1-207ENST00000539493 COX7A1P24310 79 aa4.29□□□□□ -1.72
RAB3GAP1-207ENST00000539493 XCL1P47992 114 aa4.29□□□□□ -1.72
RAB3GAP1-207ENST00000539493 TSPEAR-AS2P59090 65 aa4.29□□□□□ -1.72
RAB3GAP1-207ENST00000539493 KLHL30-AS1Q8NEE0 82 aa4.29□□□□□ -1.72
RAB3GAP1-207ENST00000539493 EEF1AKMT3Q96AZ1 226 aa4.29□□□□□ -1.72
RAB3GAP1-207ENST00000539493 CCDC140Q96MF4 163 aa4.29□□□□□ -1.72
RAB3GAP1-207ENST00000539493 XCL2Q9UBD3 114 aa4.29□□□□□ -1.72
RAB3GAP1-207ENST00000539493 PIEZO1Q92508 2521 aa4.29□□□□□ -1.72
RAB3GAP1-207ENST00000539493 IGHV1-69DA0A0B4J2H0 117 aa4.28□□□□□ -1.72
RAB3GAP1-207ENST00000539493 A0A0U1RQV1 116 aa4.28□□□□□ -1.72
RAB3GAP1-207ENST00000539493 IGIPA6NJ69 53 aa4.28□□□□□ -1.72
RAB3GAP1-207ENST00000539493 C14orf178Q8N769 122 aaPredicted RBP4.28□□□□□ -1.72
RAB3GAP1-207ENST00000539493 PKD1L2Q7Z442 2459 aa4.28□□□□□ -1.72
RAB3GAP1-207ENST00000539493 COL12A1Q99715 3063 aa4.28□□□□□ -1.72
RAB3GAP1-207ENST00000539493 CFAP46Q8IYW2 2715 aa4.28□□□□□ -1.72
RAB3GAP1-207ENST00000539493 SH2D1AO60880 128 aa4.28□□□□□ -1.72
RAB3GAP1-207ENST00000539493 MUSTN1Q8IVN3 82 aa4.28□□□□□ -1.72
RAB3GAP1-207ENST00000539493 ITLN2Q8WWU7 325 aaPredicted RBP4.28□□□□□ -1.72
RAB3GAP1-207ENST00000539493 OBSCN-AS1Q96MR7 158 aa4.28□□□□□ -1.72
RAB3GAP1-207ENST00000539493 HIVEP3Q5T1R4 2406 aa4.28□□□□□ -1.72
RAB3GAP1-207ENST00000539493 CCKP06307 115 aa4.28□□□□□ -1.72
RAB3GAP1-207ENST00000539493 GNLYP22749 145 aa4.28□□□□□ -1.72
RAB3GAP1-207ENST00000539493 DAZ4Q86SG3 579 aaKnown RBP4.28□□□□□ -1.72
RAB3GAP1-207ENST00000539493 FAM223AQ8IWN6 122 aa4.28□□□□□ -1.72
RAB3GAP1-207ENST00000539493 SCGB3A1Q96QR1 104 aa4.28□□□□□ -1.72
RAB3GAP1-207ENST00000539493 LEPROTO15243 131 aa4.27□□□□□ -1.73
RAB3GAP1-207ENST00000539493 UBE2E1P51965 193 aa4.27□□□□□ -1.73
RAB3GAP1-207ENST00000539493 ATP5EP2Q5VTU8 51 aa4.27□□□□□ -1.73
RAB3GAP1-207ENST00000539493 LITAFQ99732 161 aa4.27□□□□□ -1.73
RAB3GAP1-207ENST00000539493 SMIM2Q9BVW6 85 aa4.27□□□□□ -1.73
RAB3GAP1-207ENST00000539493 TRBV19A0A075B6N1 114 aa4.27□□□□□ -1.73
RAB3GAP1-207ENST00000539493 TRBV10-3A0A0K0K1G6 114 aa4.27□□□□□ -1.73
RAB3GAP1-207ENST00000539493 C19orf84I3L1E1 186 aa4.27□□□□□ -1.73
RAB3GAP1-207ENST00000539493 NDUFC1O43677 76 aa4.27□□□□□ -1.73
RAB3GAP1-207ENST00000539493 DAZ2Q13117 558 aaKnown RBP4.27□□□□□ -1.73
RAB3GAP1-207ENST00000539493 ZFHX3Q15911 3703 aa4.27□□□□□ -1.73
RAB3GAP1-207ENST00000539493 M0R1W7 72 aa4.26□□□□□ -1.73
RAB3GAP1-207ENST00000539493 SPRY2O43597 315 aa4.26□□□□□ -1.73
RAB3GAP1-207ENST00000539493 IGHV3-48P01763 117 aa4.26□□□□□ -1.73
RAB3GAP1-207ENST00000539493 APELAP0DMC3 54 aa4.26□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 67.7 ms