RNA–Protein interactions for RNA: ENST00000539303.5

SNHG1-210, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 3 BASIC

Gene SNHG1, Length 240 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-210ENST00000539303 PATJQ8NI35 1801 aa1.08□□□□□ -2.24
SNHG1-210ENST00000539303 ARFGEF1Q9Y6D6 1849 aa1.08□□□□□ -2.24
SNHG1-210ENST00000539303 BLMP54132 1417 aaPredicted RBP1.07□□□□□ -2.24
SNHG1-210ENST00000539303 ROBO1Q9Y6N7 1651 aa1.07□□□□□ -2.24
SNHG1-210ENST00000539303 KIAA0100Q14667 2235 aaKnown RBP1.07□□□□□ -2.24
SNHG1-210ENST00000539303 PRRC2BQ5JSZ5 2229 aaKnown RBP1.07□□□□□ -2.24
SNHG1-210ENST00000539303 RP1L1Q8IWN7 2480 aaPredicted RBP1.07□□□□□ -2.24
SNHG1-210ENST00000539303 MAPKBP1O60336 1514 aa1.07□□□□□ -2.24
SNHG1-210ENST00000539303 SIX6O95475 246 aa1.07□□□□□ -2.24
SNHG1-210ENST00000539303 CCL3L1P16619 93 aa1.07□□□□□ -2.24
SNHG1-210ENST00000539303 UBE2D1P51668 147 aa1.07□□□□□ -2.24
SNHG1-210ENST00000539303 FAM74A4Q5TZK3 123 aa1.07□□□□□ -2.24
SNHG1-210ENST00000539303 LINC00575Q6W349 94 aa1.07□□□□□ -2.24
SNHG1-210ENST00000539303 ZNF818PQ6ZRF7 136 aa1.07□□□□□ -2.24
SNHG1-210ENST00000539303 LINC00312Q9Y6C7 94 aa1.07□□□□□ -2.24
SNHG1-210ENST00000539303 PHIPQ8WWQ0 1821 aa1.07□□□□□ -2.24
SNHG1-210ENST00000539303 PLXNA1Q9UIW2 1896 aa1.07□□□□□ -2.24
SNHG1-210ENST00000539303 CPSF1Q10570 1443 aaKnown RBP1.06□□□□□ -2.24
SNHG1-210ENST00000539303 MRC2Q9UBG0 1479 aa1.06□□□□□ -2.24
SNHG1-210ENST00000539303 MED12Q93074 2177 aa1.06□□□□□ -2.24
SNHG1-210ENST00000539303 DOCK1Q14185 1865 aa1.06□□□□□ -2.24
SNHG1-210ENST00000539303 IGKV2D-29A0A075B6S2 120 aaPredicted RBP1.06□□□□□ -2.24
SNHG1-210ENST00000539303 UBE2L5PA0A1B0GUS4 154 aa1.06□□□□□ -2.24
SNHG1-210ENST00000539303 RBAKDNA6NC62 111 aa1.06□□□□□ -2.24
SNHG1-210ENST00000539303 SSSCA1O60232 199 aa1.06□□□□□ -2.24
SNHG1-210ENST00000539303 S100A8P05109 93 aa1.06□□□□□ -2.24
SNHG1-210ENST00000539303 ELOF1P60002 83 aaKnown RBP1.06□□□□□ -2.24
SNHG1-210ENST00000539303 UBE2L3P68036 154 aaKnown RBP1.06□□□□□ -2.24
SNHG1-210ENST00000539303 KLKP1Q107X0 134 aa1.06□□□□□ -2.24
SNHG1-210ENST00000539303 COMMD6Q7Z4G1 85 aa1.06□□□□□ -2.24
SNHG1-210ENST00000539303 COX7B2Q8TF08 81 aa1.06□□□□□ -2.24
SNHG1-210ENST00000539303 KDM6BO15054 1643 aa1.06□□□□□ -2.24
SNHG1-210ENST00000539303 ABCA4P78363 2273 aa1.06□□□□□ -2.24
SNHG1-210ENST00000539303 FLG2Q5D862 2391 aaPredicted RBP1.06□□□□□ -2.24
SNHG1-210ENST00000539303 DOCK2Q92608 1830 aa1.05□□□□□ -2.24
SNHG1-210ENST00000539303 TRBV7-1A0A0A6YYK4 115 aa1.05□□□□□ -2.24
SNHG1-210ENST00000539303 S100A10P60903 97 aa1.05□□□□□ -2.24
SNHG1-210ENST00000539303 DCDP81605 110 aaKnown RBP1.05□□□□□ -2.24
SNHG1-210ENST00000539303 KRTAP21-3Q3LHN1 58 aa1.05□□□□□ -2.24
SNHG1-210ENST00000539303 C10orf128Q5T292 105 aa1.05□□□□□ -2.24
SNHG1-210ENST00000539303 TTC9CQ8N5M4 171 aa1.05□□□□□ -2.24
SNHG1-210ENST00000539303 ACBD7Q8N6N7 88 aa1.05□□□□□ -2.24
SNHG1-210ENST00000539303 DPH3P1Q9H4G8 78 aa1.05□□□□□ -2.24
SNHG1-210ENST00000539303 TMEM14BQ9NUH8 114 aa1.05□□□□□ -2.24
SNHG1-210ENST00000539303 V9GYV3 84 aa1.05□□□□□ -2.24
SNHG1-210ENST00000539303 CCNB3Q8WWL7 1395 aa1.05□□□□□ -2.24
SNHG1-210ENST00000539303 CASKIN1Q8WXD9 1431 aa1.05□□□□□ -2.24
SNHG1-210ENST00000539303 CNTLNQ9NXG0 1405 aa1.05□□□□□ -2.24
SNHG1-210ENST00000539303 MUC6Q6W4X9 2439 aa1.04□□□□□ -2.24
SNHG1-210ENST00000539303 M0R143 59 aa1.04□□□□□ -2.24
SNHG1-210ENST00000539303 ATP5EP56381 51 aaPredicted RBP1.04□□□□□ -2.24
SNHG1-210ENST00000539303 MYOZ3Q8TDC0 251 aa1.04□□□□□ -2.24
SNHG1-210ENST00000539303 CYP4F30PQ9H0H9 118 aa1.04□□□□□ -2.24
SNHG1-210ENST00000539303 TCHHQ07283 1943 aa1.04□□□□□ -2.24
SNHG1-210ENST00000539303 ZFYVE16Q7Z3T8 1539 aa1.04□□□□□ -2.24
SNHG1-210ENST00000539303 SMARCA2P51531 1590 aa1.04□□□□□ -2.24
SNHG1-210ENST00000539303 TNS1Q9HBL0 1735 aaKnown RBP1.03□□□□□ -2.24
SNHG1-210ENST00000539303 CLPSL1A2RUU4 121 aa1.03□□□□□ -2.24
SNHG1-210ENST00000539303 SNCAP37840 140 aa1.03□□□□□ -2.24
SNHG1-210ENST00000539303 EDDM3BP56851 147 aa1.03□□□□□ -2.24
SNHG1-210ENST00000539303 KRTAP21-2Q3LI59 83 aa1.03□□□□□ -2.24
SNHG1-210ENST00000539303 NCMAPQ5T1S8 102 aa1.03□□□□□ -2.24
SNHG1-210ENST00000539303 C10orf99Q6UWK7 81 aa1.03□□□□□ -2.24
SNHG1-210ENST00000539303 PLAC4Q8WY50 150 aa1.03□□□□□ -2.24
SNHG1-210ENST00000539303 TSLPQ969D9 159 aa1.03□□□□□ -2.24
SNHG1-210ENST00000539303 LINC00474Q9P2X8 69 aa1.03□□□□□ -2.24
SNHG1-210ENST00000539303 PPIP5K1Q6PFW1 1433 aa1.03□□□□□ -2.24
SNHG1-210ENST00000539303 TMEM262E9PQX1 116 aa1.02□□□□□ -2.25
SNHG1-210ENST00000539303 C10orf71Q711Q0 1435 aa1.02□□□□□ -2.25
SNHG1-210ENST00000539303 SCP2D1Q9UJQ7 156 aa1.02□□□□□ -2.25
SNHG1-210ENST00000539303 TRIOBPQ9H2D6 2365 aa1.01□□□□□ -2.25
SNHG1-210ENST00000539303 PSME4Q14997 1843 aa1.01□□□□□ -2.25
SNHG1-210ENST00000539303 SPHKAPQ2M3C7 1700 aa1.01□□□□□ -2.25
SNHG1-210ENST00000539303 VPS8Q8N3P4 1428 aa1.01□□□□□ -2.25
SNHG1-210ENST00000539303 A0A087WTM6 91 aa1.01□□□□□ -2.25
SNHG1-210ENST00000539303 LY6G6CO95867 125 aa1.01□□□□□ -2.25
SNHG1-210ENST00000539303 PPP1R17O96001 155 aa1.01□□□□□ -2.25
SNHG1-210ENST00000539303 ARL14EPLP0DKL9 152 aa1.01□□□□□ -2.25
SNHG1-210ENST00000539303 PKIAP61925 76 aa1.01□□□□□ -2.25
SNHG1-210ENST00000539303 GNG11P61952 73 aa1.01□□□□□ -2.25
SNHG1-210ENST00000539303 SPINK13Q1W4C9 94 aa1.01□□□□□ -2.25
SNHG1-210ENST00000539303 Q8N6K4 173 aa1.01□□□□□ -2.25
SNHG1-210ENST00000539303 LOC285556D6RIA3 1793 aa1.01□□□□□ -2.25
SNHG1-210ENST00000539303 CC2D2AQ9P2K1 1620 aa1□□□□□ -2.25
SNHG1-210ENST00000539303 SCAPERQ9BY12 1400 aa1□□□□□ -2.25
SNHG1-210ENST00000539303 TRBV7-3A0A075B6L6 115 aa1□□□□□ -2.25
SNHG1-210ENST00000539303 H3BQ15 152 aa1□□□□□ -2.25
SNHG1-210ENST00000539303 MPC2O95563 127 aa1□□□□□ -2.25
SNHG1-210ENST00000539303 SPINT3P49223 89 aa1□□□□□ -2.25
SNHG1-210ENST00000539303 COL6A6A6NMZ7 2263 aa1□□□□□ -2.25
SNHG1-210ENST00000539303 MED13LQ71F56 2210 aa1□□□□□ -2.25
SNHG1-210ENST00000539303 LRRC37A3O60309 1634 aa1□□□□□ -2.25
SNHG1-210ENST00000539303 DOCK11Q5JSL3 2073 aa1□□□□□ -2.25
SNHG1-210ENST00000539303 AKAP12Q02952 1782 aa0.99□□□□□ -2.25
SNHG1-210ENST00000539303 PI4KAP42356 2102 aa0.99□□□□□ -2.25
SNHG1-210ENST00000539303 SPAG11BQ08648 103 aa0.99□□□□□ -2.25
SNHG1-210ENST00000539303 COL5A1-AS1Q5SY13 56 aa0.99□□□□□ -2.25
SNHG1-210ENST00000539303 SPAG11AQ6PDA7 123 aa0.99□□□□□ -2.25
SNHG1-210ENST00000539303 Q96NJ1 140 aa0.99□□□□□ -2.25
SNHG1-210ENST00000539303 AP4S1Q9Y587 144 aa0.99□□□□□ -2.25
Retrieved 100 of 20,778 RNA–protein pairs in 144.3 ms