RNA–Protein interactions for RNA: ENST00000539208.5

GNE-204, Transcript of glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase, humanhuman

TSL 2 BASIC

Gene GNE, Length 2,190 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNE-204ENST00000539208 M0R2P5 195 aa13.11□□□□□ -0.31
GNE-204ENST00000539208 KRTAP1-1Q07627 177 aa13.11□□□□□ -0.31
GNE-204ENST00000539208 A8MWV9 139 aa13.11□□□□□ -0.31
GNE-204ENST00000539208 ZNF415Q09FC8 603 aa13.11□□□□□ -0.31
GNE-204ENST00000539208 SORL1Q92673 2214 aa13.11□□□□□ -0.31
GNE-204ENST00000539208 HIST2H2BCQ6DN03 193 aa13.1□□□□□ -0.31
GNE-204ENST00000539208 UFSP1Q6NVU6 142 aa13.1□□□□□ -0.31
GNE-204ENST00000539208 HTN1P15515 57 aa13.1□□□□□ -0.31
GNE-204ENST00000539208 PRADC1Q9BSG0 188 aa13.1□□□□□ -0.31
GNE-204ENST00000539208 H3BUT2 72 aa13.09□□□□□ -0.31
GNE-204ENST00000539208 P0DMU3 169 aa13.09□□□□□ -0.31
GNE-204ENST00000539208 FAM231AP0DMU4 169 aa13.09□□□□□ -0.31
GNE-204ENST00000539208 FAM231CP0DMU5 169 aa13.09□□□□□ -0.31
GNE-204ENST00000539208 C16orf95Q9H693 158 aa13.09□□□□□ -0.31
GNE-204ENST00000539208 C11orf86A6NJI1 115 aa13.08□□□□□ -0.31
GNE-204ENST00000539208 CCL24O00175 119 aa13.08□□□□□ -0.31
GNE-204ENST00000539208 INSP01308 110 aa13.08□□□□□ -0.31
GNE-204ENST00000539208 C20orf203Q8NBC4 194 aa13.08□□□□□ -0.31
GNE-204ENST00000539208 DEFB104AQ8WTQ1 72 aa13.08□□□□□ -0.31
GNE-204ENST00000539208 ZNF469Q96JG9 3925 aaPredicted RBP13.08□□□□□ -0.31
GNE-204ENST00000539208 MYO9AB2RTY4 2548 aa13.08□□□□□ -0.32
GNE-204ENST00000539208 GAGE10A6NGK3 116 aa13.08□□□□□ -0.32
GNE-204ENST00000539208 CD28P10747 220 aa13.08□□□□□ -0.32
GNE-204ENST00000539208 PLA2G2AP14555 144 aa13.08□□□□□ -0.32
GNE-204ENST00000539208 HIST2H2BDQ6DRA6 164 aa13.08□□□□□ -0.32
GNE-204ENST00000539208 GTF2H5Q6ZYL4 71 aa13.08□□□□□ -0.32
GNE-204ENST00000539208 SPXQ9BT56 116 aa13.08□□□□□ -0.32
GNE-204ENST00000539208 C11orf72Q8NBR9 251 aa13.07□□□□□ -0.32
GNE-204ENST00000539208 RAB37Q96AX2 223 aa13.07□□□□□ -0.32
GNE-204ENST00000539208 TENM4Q6N022 2769 aa13.07□□□□□ -0.32
GNE-204ENST00000539208 J3QKU1 62 aa13.07□□□□□ -0.32
GNE-204ENST00000539208 RNASE1P07998 156 aaKnown RBP13.07□□□□□ -0.32
GNE-204ENST00000539208 HERVK_113P61574 105 aa13.07□□□□□ -0.32
GNE-204ENST00000539208 ODF3L2Q3SX64 289 aa13.07□□□□□ -0.32
GNE-204ENST00000539208 PHLDA1Q8WV24 401 aaPredicted RBP13.07□□□□□ -0.32
GNE-204ENST00000539208 LINC01587Q99440 93 aa13.07□□□□□ -0.32
GNE-204ENST00000539208 TRBV7-3A0A075B6L6 115 aa13.06□□□□□ -0.32
GNE-204ENST00000539208 HIST1H4GQ99525 98 aa13.06□□□□□ -0.32
GNE-204ENST00000539208 YAE1D1Q9NRH1 226 aa13.06□□□□□ -0.32
GNE-204ENST00000539208 TSSC4Q9Y5U2 329 aaPredicted RBP13.06□□□□□ -0.32
GNE-204ENST00000539208 A0A1W2PPM0 123 aa13.05□□□□□ -0.32
GNE-204ENST00000539208 FOSL1P15407 271 aa13.05□□□□□ -0.32
GNE-204ENST00000539208 BEAN1Q3B7T3 259 aa13.05□□□□□ -0.32
GNE-204ENST00000539208 K7EP34 96 aa13.05□□□□□ -0.32
GNE-204ENST00000539208 NFE4Q86UQ8 179 aa13.05□□□□□ -0.32
GNE-204ENST00000539208 A0A1W2PRX2 142 aa13.04□□□□□ -0.32
GNE-204ENST00000539208 PRM2P04554 102 aa13.04□□□□□ -0.32
GNE-204ENST00000539208 SCGB2A2Q13296 93 aa13.04□□□□□ -0.32
GNE-204ENST00000539208 CFAP126Q5VTH2 177 aa13.04□□□□□ -0.32
GNE-204ENST00000539208 LINC01006Q8NI28 216 aa13.04□□□□□ -0.32
GNE-204ENST00000539208 PDZD2O15018 2839 aa13.04□□□□□ -0.32
GNE-204ENST00000539208 NBPF19A0A087WUL8 3843 aa13.04□□□□□ -0.32
GNE-204ENST00000539208 RHODO00212 210 aa13.04□□□□□ -0.32
GNE-204ENST00000539208 C11orf44Q8N8P7 122 aa13.04□□□□□ -0.32
GNE-204ENST00000539208 ZNRF2Q8NHG8 242 aa13.04□□□□□ -0.32
GNE-204ENST00000539208 CITED2Q99967 270 aaPredicted RBP13.04□□□□□ -0.32
GNE-204ENST00000539208 NHP2Q9NX24 153 aaKnown RBP13.04□□□□□ -0.32
GNE-204ENST00000539208 PYGO1Q9Y3Y4 419 aa13.04□□□□□ -0.32
GNE-204ENST00000539208 ZNF815PA8K554 130 aa13.03□□□□□ -0.32
GNE-204ENST00000539208 SAMD5Q5TGI4 173 aa13.03□□□□□ -0.32
GNE-204ENST00000539208 TNFRSF18Q9Y5U5 241 aa13.03□□□□□ -0.32
GNE-204ENST00000539208 AKAP9Q99996 3911 aa13.03□□□□□ -0.32
GNE-204ENST00000539208 IGHV3-73A0A0B4J1V6 119 aa13.03□□□□□ -0.32
GNE-204ENST00000539208 PROK1P58294 105 aa13.03□□□□□ -0.32
GNE-204ENST00000539208 STHQ8IWL8 128 aa13.03□□□□□ -0.32
GNE-204ENST00000539208 TLN2Q9Y4G6 2542 aa13.02□□□□□ -0.32
GNE-204ENST00000539208 GAGE12BA1L429 117 aa13.02□□□□□ -0.33
GNE-204ENST00000539208 EMP1P54849 157 aa13.02□□□□□ -0.33
GNE-204ENST00000539208 NAA38Q9BRA0 125 aaKnown RBP13.02□□□□□ -0.33
GNE-204ENST00000539208 FLNAP21333 2647 aaKnown RBP13.02□□□□□ -0.33
GNE-204ENST00000539208 FABP2P12104 132 aa13.01□□□□□ -0.33
GNE-204ENST00000539208 A0A1B0GWB2 263 aa13.01□□□□□ -0.33
GNE-204ENST00000539208 RS1O15537 224 aa13.01□□□□□ -0.33
GNE-204ENST00000539208 CRYBA4P53673 196 aa13.01□□□□□ -0.33
GNE-204ENST00000539208 CMC4P56277 68 aaPredicted RBP13.01□□□□□ -0.33
GNE-204ENST00000539208 RNASE8Q8TDE3 154 aaKnown RBP13.01□□□□□ -0.33
GNE-204ENST00000539208 DNAJC30Q96LL9 226 aa13.01□□□□□ -0.33
GNE-204ENST00000539208 OPRPNQ99935 248 aaPredicted RBP13.01□□□□□ -0.33
GNE-204ENST00000539208 IGLV4-3A0A075B6K6 122 aa13□□□□□ -0.33
GNE-204ENST00000539208 K7ERJ3 54 aa13□□□□□ -0.33
GNE-204ENST00000539208 IGHV3-53P01767 116 aa13□□□□□ -0.33
GNE-204ENST00000539208 C12orf74Q32Q52 190 aa13□□□□□ -0.33
GNE-204ENST00000539208 TMEM170BQ5T4T1 132 aa13□□□□□ -0.33
GNE-204ENST00000539208 Q6ZSN1 163 aa13□□□□□ -0.33
GNE-204ENST00000539208 OR5A1Q8NGJ0 315 aa13□□□□□ -0.33
GNE-204ENST00000539208 XCL2Q9UBD3 114 aa13□□□□□ -0.33
GNE-204ENST00000539208 C1orf158Q8N1D5 194 aa12.99□□□□□ -0.33
GNE-204ENST00000539208 VCX2Q9H322 139 aa12.99□□□□□ -0.33
GNE-204ENST00000539208 SPCS1Q9Y6A9 102 aa12.99□□□□□ -0.33
GNE-204ENST00000539208 SCGB1D4Q6XE38 83 aa12.98□□□□□ -0.33
GNE-204ENST00000539208 IL17DQ8TAD2 202 aa12.98□□□□□ -0.33
GNE-204ENST00000539208 MRPL16Q9NX20 251 aaKnown RBP12.98□□□□□ -0.33
GNE-204ENST00000539208 SONP18583 2426 aaKnown RBP12.98□□□□□ -0.33
GNE-204ENST00000539208 PLEKHB2Q96CS7 222 aa12.98□□□□□ -0.33
GNE-204ENST00000539208 NACAE9PAV3 2078 aa12.98□□□□□ -0.33
GNE-204ENST00000539208 AMELXQ99217 191 aa12.97□□□□□ -0.33
GNE-204ENST00000539208 TMEM223A0PJW6 202 aa12.97□□□□□ -0.33
GNE-204ENST00000539208 IGLL5B9A064 214 aa12.97□□□□□ -0.33
GNE-204ENST00000539208 AZU1P20160 251 aa12.97□□□□□ -0.33
GNE-204ENST00000539208 HILS1P60008 231 aa12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 9.9 ms