RNA–Protein interactions for RNA: ENST00000538570.5

COL4A6-208, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 1 (best) BASIC

Gene COL4A6, Length 6,528 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-208ENST00000538570 FGF23Q9GZV9 251 aaPredicted RBP7.66□□□□□ -1.18
COL4A6-208ENST00000538570 SPRNQ5BIV9 151 aa7.66□□□□□ -1.18
COL4A6-208ENST00000538570 SEM1Q6ZVN7 128 aa7.66□□□□□ -1.18
COL4A6-208ENST00000538570 DOCK7Q96N67 2140 aa7.66□□□□□ -1.18
COL4A6-208ENST00000538570 TTC28Q96AY4 2481 aa7.66□□□□□ -1.18
COL4A6-208ENST00000538570 WDR81Q562E7 1941 aa7.66□□□□□ -1.18
COL4A6-208ENST00000538570 C4orf48Q5BLP8 95 aa7.66□□□□□ -1.18
COL4A6-208ENST00000538570 CADP27708 2225 aa7.66□□□□□ -1.18
COL4A6-208ENST00000538570 FRMD6-AS1P0C7T7 363 aa7.66□□□□□ -1.18
COL4A6-208ENST00000538570 MGAMO43451 1857 aa7.65□□□□□ -1.18
COL4A6-208ENST00000538570 ABCA1O95477 2261 aa7.65□□□□□ -1.18
COL4A6-208ENST00000538570 DEFB113Q30KQ7 82 aa7.65□□□□□ -1.18
COL4A6-208ENST00000538570 CREBBPQ92793 2442 aa7.65□□□□□ -1.18
COL4A6-208ENST00000538570 WNK2Q9Y3S1 2297 aa7.65□□□□□ -1.18
COL4A6-208ENST00000538570 IGHV4OR15-8A0A075B7B6 117 aa7.65□□□□□ -1.18
COL4A6-208ENST00000538570 A0A087WW49 117 aa7.65□□□□□ -1.18
COL4A6-208ENST00000538570 C5orf56Q8N8D9 126 aa7.65□□□□□ -1.18
COL4A6-208ENST00000538570 ESM1Q9NQ30 184 aa7.65□□□□□ -1.18
COL4A6-208ENST00000538570 IGHV4-61A0A0C4DH41 118 aa7.65□□□□□ -1.19
COL4A6-208ENST00000538570 ENHOQ6UWT2 76 aa7.65□□□□□ -1.19
COL4A6-208ENST00000538570 EML6Q6ZMW3 1958 aa7.65□□□□□ -1.19
COL4A6-208ENST00000538570 C2orf70A6NJV1 201 aa7.65□□□□□ -1.19
COL4A6-208ENST00000538570 BLCAPP62952 87 aa7.65□□□□□ -1.19
COL4A6-208ENST00000538570 SPAG11BQ08648 103 aa7.65□□□□□ -1.19
COL4A6-208ENST00000538570 PRAC2D3DTV9 90 aa7.64□□□□□ -1.19
COL4A6-208ENST00000538570 CTRLP40313 264 aa7.64□□□□□ -1.19
COL4A6-208ENST00000538570 PRR15LQ9BU68 103 aa7.64□□□□□ -1.19
COL4A6-208ENST00000538570 TM2D2Q9BX73 214 aa7.64□□□□□ -1.19
COL4A6-208ENST00000538570 GRNP28799 593 aaKnown RBP7.64□□□□□ -1.19
COL4A6-208ENST00000538570 FAM167A-AS1Q96KT0 104 aa7.64□□□□□ -1.19
COL4A6-208ENST00000538570 IGHV1-58A0A0C4DH39 117 aa7.64□□□□□ -1.19
COL4A6-208ENST00000538570 Q8N9W7 124 aa7.64□□□□□ -1.19
COL4A6-208ENST00000538570 USF3Q68DE3 2245 aa7.64□□□□□ -1.19
COL4A6-208ENST00000538570 HELZP42694 1942 aaKnown RBP7.64□□□□□ -1.19
COL4A6-208ENST00000538570 K7EMT4 169 aa7.64□□□□□ -1.19
COL4A6-208ENST00000538570 KRTAP27-1Q3LI81 207 aa7.64□□□□□ -1.19
COL4A6-208ENST00000538570 SOSTDC1Q6X4U4 206 aa7.64□□□□□ -1.19
COL4A6-208ENST00000538570 MIR7-3HGQ8N6C7 128 aa7.64□□□□□ -1.19
COL4A6-208ENST00000538570 PDE6GP18545 87 aa7.63□□□□□ -1.19
COL4A6-208ENST00000538570 IGHV4-30-2A0A087WSY4 118 aa7.63□□□□□ -1.19
COL4A6-208ENST00000538570 H0Y9J4 135 aa7.63□□□□□ -1.19
COL4A6-208ENST00000538570 IMUPQ9GZP8 106 aa7.63□□□□□ -1.19
COL4A6-208ENST00000538570 ZNF407Q9C0G0 2248 aa7.63□□□□□ -1.19
COL4A6-208ENST00000538570 PLXNA2O75051 1894 aa7.63□□□□□ -1.19
COL4A6-208ENST00000538570 MRPS36P82909 103 aaKnown RBP7.62□□□□□ -1.19
COL4A6-208ENST00000538570 TSC2P49815 1807 aa7.62□□□□□ -1.19
COL4A6-208ENST00000538570 K7ERS5 55 aa7.62□□□□□ -1.19
COL4A6-208ENST00000538570 TRBV6-1A0A0K0K1D8 114 aa7.62□□□□□ -1.19
COL4A6-208ENST00000538570 TEX22C9J3V5 150 aa7.62□□□□□ -1.19
COL4A6-208ENST00000538570 COX7BP24311 80 aa7.62□□□□□ -1.19
COL4A6-208ENST00000538570 TP73-AS1Q9UF72 201 aa7.62□□□□□ -1.19
COL4A6-208ENST00000538570 NFE4Q86UQ8 179 aa7.61□□□□□ -1.19
COL4A6-208ENST00000538570 GPHB5Q86YW7 130 aa7.61□□□□□ -1.19
COL4A6-208ENST00000538570 PRORYQ9H606 182 aa7.61□□□□□ -1.19
COL4A6-208ENST00000538570 KLK12Q9UKR0 248 aa7.61□□□□□ -1.19
COL4A6-208ENST00000538570 NCKAP5O14513 1909 aa7.61□□□□□ -1.19
COL4A6-208ENST00000538570 KIAA1671Q9BY89 1806 aa7.61□□□□□ -1.19
COL4A6-208ENST00000538570 TRBV27A0A0K0K1C4 114 aa7.61□□□□□ -1.19
COL4A6-208ENST00000538570 PIP4P1Q86T03 277 aa7.61□□□□□ -1.19
COL4A6-208ENST00000538570 Q6ZSR3 168 aa7.6□□□□□ -1.19
COL4A6-208ENST00000538570 C4orf3Q8WVX3 66 aa7.6□□□□□ -1.19
COL4A6-208ENST00000538570 B9D2Q9BPU9 175 aa7.6□□□□□ -1.19
COL4A6-208ENST00000538570 ATP5EP2Q5VTU8 51 aa7.6□□□□□ -1.19
COL4A6-208ENST00000538570 PCNX1Q96RV3 2341 aa7.6□□□□□ -1.19
COL4A6-208ENST00000538570 MIAQ16674 131 aa7.6□□□□□ -1.19
COL4A6-208ENST00000538570 NANOS2P60321 138 aaKnown RBP7.6□□□□□ -1.19
COL4A6-208ENST00000538570 NACAE9PAV3 2078 aa7.6□□□□□ -1.19
COL4A6-208ENST00000538570 TMEM89A2RUT3 159 aa7.6□□□□□ -1.19
COL4A6-208ENST00000538570 USP17L23D6RBM5 183 aa7.6□□□□□ -1.19
COL4A6-208ENST00000538570 IGKV2D-26A0A0A0MRZ7 120 aa7.59□□□□□ -1.19
COL4A6-208ENST00000538570 MRPS12O15235 138 aaKnown RBP7.59□□□□□ -1.19
COL4A6-208ENST00000538570 MYCNOSP40205 109 aa7.59□□□□□ -1.19
COL4A6-208ENST00000538570 Q6Q795 121 aa7.59□□□□□ -1.19
COL4A6-208ENST00000538570 NLRC5Q86WI3 1866 aa7.59□□□□□ -1.19
COL4A6-208ENST00000538570 PIK3CD-AS1Q5SR53 167 aa7.59□□□□□ -1.19
COL4A6-208ENST00000538570 C20orf203Q8NBC4 194 aa7.59□□□□□ -1.19
COL4A6-208ENST00000538570 BDP1A6H8Y1 2624 aa7.59□□□□□ -1.19
COL4A6-208ENST00000538570 IGKV4-1P06312 121 aa7.59□□□□□ -1.19
COL4A6-208ENST00000538570 TMEM263Q8WUH6 116 aaKnown RBP7.59□□□□□ -1.19
COL4A6-208ENST00000538570 PLXND1Q9Y4D7 1925 aa7.59□□□□□ -1.19
COL4A6-208ENST00000538570 DEFB135Q30KP9 77 aa7.59□□□□□ -1.19
COL4A6-208ENST00000538570 LINC00526Q96FQ7 95 aa7.59□□□□□ -1.19
COL4A6-208ENST00000538570 LRCOL1A6NCL2 159 aa7.59□□□□□ -1.2
COL4A6-208ENST00000538570 IGFL2Q6UWQ7 119 aa7.59□□□□□ -1.2
COL4A6-208ENST00000538570 MDFICQ9P1T7 246 aa7.58□□□□□ -1.2
COL4A6-208ENST00000538570 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP7.58□□□□□ -1.22e-8■■■■■ 31.6
COL4A6-208ENST00000538570 ZFHX2Q9C0A1 2572 aaPredicted RBP7.58□□□□□ -1.2
COL4A6-208ENST00000538570 BPY2O14599 106 aa7.58□□□□□ -1.2
COL4A6-208ENST00000538570 KLK5Q9Y337 293 aaPredicted RBP7.58□□□□□ -1.2
COL4A6-208ENST00000538570 DEFB4AO15263 64 aa7.58□□□□□ -1.2
COL4A6-208ENST00000538570 INSL3P51460 131 aa7.58□□□□□ -1.2
COL4A6-208ENST00000538570 TNRC6BQ9UPQ9 1833 aaKnown RBP7.57□□□□□ -1.2
COL4A6-208ENST00000538570 TRBV10-1A0A0K0K1A3 114 aa7.57□□□□□ -1.2
COL4A6-208ENST00000538570 C19orf71A6NCJ1 209 aa7.57□□□□□ -1.2
COL4A6-208ENST00000538570 PRO0255Q9UI72 69 aa7.57□□□□□ -1.2
COL4A6-208ENST00000538570 TANC1Q9C0D5 1861 aa7.57□□□□□ -1.2
COL4A6-208ENST00000538570 DEFB1P60022 68 aa7.56□□□□□ -1.2
COL4A6-208ENST00000538570 ODF3L1Q8IXM7 274 aa7.56□□□□□ -1.2
COL4A6-208ENST00000538570 A0A0J9YX75 114 aa7.56□□□□□ -1.2
COL4A6-208ENST00000538570 C4orf26Q17RF5 130 aa7.56□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms