RNA–Protein interactions for RNA: ENST00000536548.5

CPSF7-216, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 4

Gene CPSF7, Length 598 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-216ENST00000536548 GLMPQ8WWB7 406 aa5.88□□□□□ -1.47
CPSF7-216ENST00000536548 PLEKHB2Q96CS7 222 aa5.88□□□□□ -1.47
CPSF7-216ENST00000536548 TIMM17AQ99595 171 aa5.88□□□□□ -1.47
CPSF7-216ENST00000536548 U3KQE9 123 aa5.88□□□□□ -1.47
CPSF7-216ENST00000536548 TNCP24821 2201 aa5.88□□□□□ -1.47
CPSF7-216ENST00000536548 TENM3Q9P273 2699 aa5.87□□□□□ -1.47
CPSF7-216ENST00000536548 CLPSL1A2RUU4 121 aa5.87□□□□□ -1.47
CPSF7-216ENST00000536548 LYNX1G3V0Z9 82 aa5.87□□□□□ -1.47
CPSF7-216ENST00000536548 VCYO14598 125 aa5.87□□□□□ -1.47
CPSF7-216ENST00000536548 TCL1BO95988 128 aa5.87□□□□□ -1.47
CPSF7-216ENST00000536548 IGHV3-30P01768 117 aa5.87□□□□□ -1.47
CPSF7-216ENST00000536548 P0DMU3 169 aa5.87□□□□□ -1.47
CPSF7-216ENST00000536548 FAM231AP0DMU4 169 aa5.87□□□□□ -1.47
CPSF7-216ENST00000536548 FAM231CP0DMU5 169 aa5.87□□□□□ -1.47
CPSF7-216ENST00000536548 IGHV3-30-5P0DP03 117 aa5.87□□□□□ -1.47
CPSF7-216ENST00000536548 LYNX1P0DP58 116 aa5.87□□□□□ -1.47
CPSF7-216ENST00000536548 ARL3P36405 182 aa5.87□□□□□ -1.47
CPSF7-216ENST00000536548 Q6Q795 121 aa5.87□□□□□ -1.47
CPSF7-216ENST00000536548 SHISA2Q6UWI4 295 aa5.87□□□□□ -1.47
CPSF7-216ENST00000536548 ANKRD29Q8N6D5 301 aa5.87□□□□□ -1.47
CPSF7-216ENST00000536548 SLC25A29Q8N8R3 303 aa5.87□□□□□ -1.47
CPSF7-216ENST00000536548 Q8N9W7 124 aa5.87□□□□□ -1.47
CPSF7-216ENST00000536548 CARD19Q96LW7 228 aa5.87□□□□□ -1.47
CPSF7-216ENST00000536548 LINC01600Q96MT4 127 aa5.87□□□□□ -1.47
CPSF7-216ENST00000536548 SACSQ9NZJ4 4579 aa5.87□□□□□ -1.47
CPSF7-216ENST00000536548 IGHV4OR15-8A0A075B7B6 117 aa5.86□□□□□ -1.47
CPSF7-216ENST00000536548 A0A087WW49 117 aa5.86□□□□□ -1.47
CPSF7-216ENST00000536548 A0A0B4J2C4 111 aa5.86□□□□□ -1.47
CPSF7-216ENST00000536548 SLC25A20O43772 301 aa5.86□□□□□ -1.47
CPSF7-216ENST00000536548 SNCGO76070 127 aa5.86□□□□□ -1.47
CPSF7-216ENST00000536548 NXPH4O95158 308 aa5.86□□□□□ -1.47
CPSF7-216ENST00000536548 DSCR9P59020 149 aa5.86□□□□□ -1.47
CPSF7-216ENST00000536548 ATXN8Q156A1 80 aa5.86□□□□□ -1.47
CPSF7-216ENST00000536548 MRPL23Q16540 153 aaKnown RBP5.86□□□□□ -1.47
CPSF7-216ENST00000536548 ECSCRQ19T08 205 aa5.86□□□□□ -1.47
CPSF7-216ENST00000536548 CLEC19AQ6UXS0 136 aa5.86□□□□□ -1.47
CPSF7-216ENST00000536548 ZFP2Q6ZN57 461 aa5.86□□□□□ -1.47
CPSF7-216ENST00000536548 RNF183Q96D59 192 aa5.86□□□□□ -1.47
CPSF7-216ENST00000536548 RPL39LQ96EH5 51 aaKnown RBP5.86□□□□□ -1.47
CPSF7-216ENST00000536548 KIR2DL4Q99706 377 aa5.86□□□□□ -1.47
CPSF7-216ENST00000536548 RYR2Q92736 4967 aa5.86□□□□□ -1.47
CPSF7-216ENST00000536548 IGLV4-69A0A075B6H9 119 aa5.85□□□□□ -1.47
CPSF7-216ENST00000536548 IGHV3OR16-8A0A075B7F1 116 aa5.85□□□□□ -1.47
CPSF7-216ENST00000536548 IGHV3-35A0A0C4DH35 117 aa5.85□□□□□ -1.47
CPSF7-216ENST00000536548 IGHV4-61A0A0C4DH41 118 aa5.85□□□□□ -1.47
CPSF7-216ENST00000536548 IGHV3-66A0A0C4DH42 116 aa5.85□□□□□ -1.47
CPSF7-216ENST00000536548 FAM223BA6NKX1 122 aa5.85□□□□□ -1.47
CPSF7-216ENST00000536548 LEPROTO15243 131 aa5.85□□□□□ -1.47
CPSF7-216ENST00000536548 IGHV1-69P01742 117 aa5.85□□□□□ -1.47
CPSF7-216ENST00000536548 CFC1BP0CG36 223 aa5.85□□□□□ -1.47
CPSF7-216ENST00000536548 CFC1P0CG37 223 aa5.85□□□□□ -1.47
CPSF7-216ENST00000536548 GAGE2BQ13066 116 aa5.85□□□□□ -1.47
CPSF7-216ENST00000536548 GAGE2EQ4V326 116 aa5.85□□□□□ -1.47
CPSF7-216ENST00000536548 APRG1Q8IVJ8 170 aa5.85□□□□□ -1.47
CPSF7-216ENST00000536548 FAM223AQ8IWN6 122 aa5.85□□□□□ -1.47
CPSF7-216ENST00000536548 C14orf178Q8N769 122 aaPredicted RBP5.85□□□□□ -1.47
CPSF7-216ENST00000536548 CCDC140Q96MF4 163 aa5.85□□□□□ -1.47
CPSF7-216ENST00000536548 CITED1Q99966 193 aa5.85□□□□□ -1.47
CPSF7-216ENST00000536548 HEATR1Q9H583 2144 aaKnown RBP5.85□□□□□ -1.47
CPSF7-216ENST00000536548 GAGE2DQ9UEU5 116 aa5.85□□□□□ -1.47
CPSF7-216ENST00000536548 TP53TG1Q9Y2A0 90 aa5.85□□□□□ -1.47
CPSF7-216ENST00000536548 HYDINQ4G0P3 5121 aa5.84□□□□□ -1.47
CPSF7-216ENST00000536548 A0A0J9YX75 114 aa5.84□□□□□ -1.47
CPSF7-216ENST00000536548 TRBV6-5A0A0K0K1A5 114 aa5.84□□□□□ -1.47
CPSF7-216ENST00000536548 IGIPA6NJ69 53 aa5.84□□□□□ -1.47
CPSF7-216ENST00000536548 C9JAW5 83 aa5.84□□□□□ -1.47
CPSF7-216ENST00000536548 J3QQQ9 107 aa5.84□□□□□ -1.47
CPSF7-216ENST00000536548 RHODO00212 210 aa5.84□□□□□ -1.47
CPSF7-216ENST00000536548 ATP6V0E1O15342 81 aa5.84□□□□□ -1.47
CPSF7-216ENST00000536548 DUSP14O95147 198 aaKnown RBP5.84□□□□□ -1.47
CPSF7-216ENST00000536548 RHOHQ15669 191 aa5.84□□□□□ -1.47
CPSF7-216ENST00000536548 ANXA2RQ3ZCQ2 193 aa5.84□□□□□ -1.47
CPSF7-216ENST00000536548 TMEM170BQ5T4T1 132 aa5.84□□□□□ -1.47
CPSF7-216ENST00000536548 ZFAND2AQ8N6M9 145 aa5.84□□□□□ -1.47
CPSF7-216ENST00000536548 KLHL30-AS1Q8NEE0 82 aa5.84□□□□□ -1.47
CPSF7-216ENST00000536548 PTH2Q96A98 100 aa5.84□□□□□ -1.47
CPSF7-216ENST00000536548 CSMD3Q7Z407 3707 aa5.84□□□□□ -1.48
CPSF7-216ENST00000536548 TRAV8-4A0A0B4J246 113 aa5.83□□□□□ -1.48
CPSF7-216ENST00000536548 SDHAF1A6NFY7 115 aa5.83□□□□□ -1.48
CPSF7-216ENST00000536548 IGHV3-33P01772 117 aa5.83□□□□□ -1.48
CPSF7-216ENST00000536548 CRYGDP07320 174 aa5.83□□□□□ -1.48
CPSF7-216ENST00000536548 RPL13AP40429 203 aaKnown RBP5.83□□□□□ -1.48
CPSF7-216ENST00000536548 POLR2KP53803 58 aaKnown RBP5.83□□□□□ -1.48
CPSF7-216ENST00000536548 FHL3Q13643 280 aa5.83□□□□□ -1.48
CPSF7-216ENST00000536548 ZNF876PQ49A33 203 aa5.83□□□□□ -1.48
CPSF7-216ENST00000536548 TTC32Q5I0X7 151 aa5.83□□□□□ -1.48
CPSF7-216ENST00000536548 PRR9Q5T870 116 aa5.83□□□□□ -1.48
CPSF7-216ENST00000536548 C11orf71Q6IPW1 123 aa5.83□□□□□ -1.48
CPSF7-216ENST00000536548 GPHB5Q86YW7 130 aa5.83□□□□□ -1.48
CPSF7-216ENST00000536548 FAM19A4Q96LR4 140 aa5.83□□□□□ -1.48
CPSF7-216ENST00000536548 SPANXDQ9BXN6 97 aa5.83□□□□□ -1.48
CPSF7-216ENST00000536548 PLCE1Q9P212 2302 aa5.83□□□□□ -1.48
CPSF7-216ENST00000536548 DYNC2H1Q8NCM8 4307 aaKnown RBP5.83□□□□□ -1.48
CPSF7-216ENST00000536548 DNAH9Q9NYC9 4486 aa5.83□□□□□ -1.48
CPSF7-216ENST00000536548 IGHV3OR16-13A0A075B7E8 117 aa5.82□□□□□ -1.48
CPSF7-216ENST00000536548 IGHV3-74A0A0B4J1X5 117 aa5.82□□□□□ -1.48
CPSF7-216ENST00000536548 GAGE12JA6NER3 117 aa5.82□□□□□ -1.48
CPSF7-216ENST00000536548 M0R2P5 195 aa5.82□□□□□ -1.48
CPSF7-216ENST00000536548 NDUFA4O00483 81 aa5.82□□□□□ -1.48
CPSF7-216ENST00000536548 GAGE7O76087 117 aa5.82□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms