RNA–Protein interactions for RNA: ENST00000534112.1

SSH3-211, Transcript of slingshot protein phosphatase 3, humanhuman

TSL 4

Gene SSH3, Length 544 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH3-211ENST00000534112 ZFP82Q8N141 532 aa13.74□□□□□ -0.21
SSH3-211ENST00000534112 OR10G8Q8NGN5 311 aa13.74□□□□□ -0.21
SSH3-211ENST00000534112 ZFP30Q9Y2G7 519 aa13.74□□□□□ -0.21
SSH3-211ENST00000534112 TMSB15BA0A087X1C1 80 aa13.73□□□□□ -0.21
SSH3-211ENST00000534112 TRAV1-1A0A0B4J248 108 aa13.73□□□□□ -0.21
SSH3-211ENST00000534112 PRSS1P07477 247 aa13.73□□□□□ -0.21
SSH3-211ENST00000534112 MPV17L2Q567V2 206 aa13.73□□□□□ -0.21
SSH3-211ENST00000534112 DGAT2L7PQ6IED9 249 aa13.73□□□□□ -0.21
SSH3-211ENST00000534112 PAGE4O60829 102 aa13.72□□□□□ -0.21
SSH3-211ENST00000534112 ANGP03950 147 aaKnown RBP13.72□□□□□ -0.21
SSH3-211ENST00000534112 LINC01559Q495D7 138 aa13.72□□□□□ -0.21
SSH3-211ENST00000534112 HLA-DQA1P01909 254 aa13.71□□□□□ -0.21
SSH3-211ENST00000534112 ZNF674Q2M3X9 581 aa13.71□□□□□ -0.21
SSH3-211ENST00000534112 CST9LP1Q5W188 147 aa13.71□□□□□ -0.21
SSH3-211ENST00000534112 ALKAL2Q6UX46 152 aa13.71□□□□□ -0.21
SSH3-211ENST00000534112 C9orf163Q8N9P6 203 aa13.71□□□□□ -0.21
SSH3-211ENST00000534112 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP13.71□□□□□ -0.21
SSH3-211ENST00000534112 MT1HL1P0DM35 61 aa13.7□□□□□ -0.22
SSH3-211ENST00000534112 RAB4BP61018 213 aa13.7□□□□□ -0.22
SSH3-211ENST00000534112 CCL20P78556 96 aa13.7□□□□□ -0.22
SSH3-211ENST00000534112 MIAQ16674 131 aa13.7□□□□□ -0.22
SSH3-211ENST00000534112 NEXN-AS1Q8NBZ9 246 aa13.7□□□□□ -0.22
SSH3-211ENST00000534112 TCEAL7Q9BRU2 100 aa13.7□□□□□ -0.22
SSH3-211ENST00000534112 TEX46H3BTG2 121 aa13.69□□□□□ -0.22
SSH3-211ENST00000534112 PANO1I0J062 215 aa13.69□□□□□ -0.22
SSH3-211ENST00000534112 FMC1Q96HJ9 113 aa13.69□□□□□ -0.22
SSH3-211ENST00000534112 CHCHD5Q9BSY4 110 aa13.69□□□□□ -0.22
SSH3-211ENST00000534112 PRR27Q6MZM9 219 aa13.68□□□□□ -0.22
SSH3-211ENST00000534112 MANBALQ9NQG1 85 aa13.68□□□□□ -0.22
SSH3-211ENST00000534112 PKIAP61925 76 aa13.67□□□□□ -0.22
SSH3-211ENST00000534112 UBE2G1P62253 170 aa13.67□□□□□ -0.22
SSH3-211ENST00000534112 SDIM1Q6ZPB5 146 aa13.67□□□□□ -0.22
SSH3-211ENST00000534112 GNG13Q9P2W3 67 aa13.67□□□□□ -0.22
SSH3-211ENST00000534112 TRBV6-1A0A0K0K1D8 114 aa13.66□□□□□ -0.22
SSH3-211ENST00000534112 LTAP01374 205 aa13.66□□□□□ -0.22
SSH3-211ENST00000534112 ZNF56Q15929 161 aa13.66□□□□□ -0.22
SSH3-211ENST00000534112 KRTAP26-1Q6PEX3 210 aa13.66□□□□□ -0.22
SSH3-211ENST00000534112 PRR34Q9NV39 138 aa13.66□□□□□ -0.22
SSH3-211ENST00000534112 RPL19P84098 196 aaKnown RBP13.65□□□□□ -0.22
SSH3-211ENST00000534112 Q6ZRU5 148 aa13.65□□□□□ -0.22
SSH3-211ENST00000534112 SREK1IP1Q8N9Q2 155 aaPredicted RBP13.65□□□□□ -0.22
SSH3-211ENST00000534112 BLOC1S1P78537 153 aa13.64□□□□□ -0.23
SSH3-211ENST00000534112 NTM-AS1Q6ZSK4 140 aa13.64□□□□□ -0.23
SSH3-211ENST00000534112 OR10AG1Q8NH19 301 aa13.64□□□□□ -0.23
SSH3-211ENST00000534112 SCO2A0A1W2PP80 73 aa13.63□□□□□ -0.23
SSH3-211ENST00000534112 AKR1C3P42330 323 aa13.63□□□□□ -0.23
SSH3-211ENST00000534112 RBX1P62877 108 aa13.63□□□□□ -0.23
SSH3-211ENST00000534112 CLPSL2Q6UWE3 100 aa13.63□□□□□ -0.23
SSH3-211ENST00000534112 LINC00269Q8N2A0 174 aa13.63□□□□□ -0.23
SSH3-211ENST00000534112 IFNA1P01562 189 aa13.62□□□□□ -0.23
SSH3-211ENST00000534112 TMEM97Q5BJF2 176 aa13.62□□□□□ -0.23
SSH3-211ENST00000534112 CLRN3Q8NCR9 226 aa13.62□□□□□ -0.23
SSH3-211ENST00000534112 LRP2P98164 4655 aa13.62□□□□□ -0.23
SSH3-211ENST00000534112 GAGE6Q13070 117 aa13.61□□□□□ -0.23
SSH3-211ENST00000534112 LYPD6BQ8NI32 183 aa13.61□□□□□ -0.23
SSH3-211ENST00000534112 VAX2Q9UIW0 290 aa13.61□□□□□ -0.23
SSH3-211ENST00000534112 F5H697 171 aa13.6□□□□□ -0.23
SSH3-211ENST00000534112 BCL2P10415 239 aa13.6□□□□□ -0.23
SSH3-211ENST00000534112 CIRBPQ14011 172 aaKnown RBP13.6□□□□□ -0.23
SSH3-211ENST00000534112 C11orf52Q96A22 123 aa13.6□□□□□ -0.23
SSH3-211ENST00000534112 DERL1Q9BUN8 251 aa13.6□□□□□ -0.23
SSH3-211ENST00000534112 MUC21A0A0G2JKD1 596 aa13.59□□□□□ -0.23
SSH3-211ENST00000534112 MUC21A0A140T8X8 626 aa13.59□□□□□ -0.23
SSH3-211ENST00000534112 S100A9P06702 114 aaKnown RBP13.59□□□□□ -0.23
SSH3-211ENST00000534112 MEF2BQ02080 365 aaPredicted RBP13.59□□□□□ -0.23
SSH3-211ENST00000534112 SSBP4Q9BWG4 385 aaPredicted RBP13.59□□□□□ -0.23
SSH3-211ENST00000534112 RNF213Q63HN8 5207 aa13.58□□□□□ -0.23
SSH3-211ENST00000534112 CXCL1P09341 107 aa13.58□□□□□ -0.24
SSH3-211ENST00000534112 TAGLN2P37802 199 aaKnown RBP13.58□□□□□ -0.24
SSH3-211ENST00000534112 CNBPP62633 177 aaKnown RBP13.58□□□□□ -0.24
SSH3-211ENST00000534112 TEX261Q6UWH6 196 aa13.58□□□□□ -0.24
SSH3-211ENST00000534112 TNXBP22105 4242 aa13.57□□□□□ -0.24
SSH3-211ENST00000534112 TRBV25-1A0A075B6N4 114 aa13.57□□□□□ -0.24
SSH3-211ENST00000534112 SNAI2O43623 268 aa13.57□□□□□ -0.24
SSH3-211ENST00000534112 SPANXN1Q5VSR9 72 aa13.57□□□□□ -0.24
SSH3-211ENST00000534112 DPH3Q96FX2 82 aa13.57□□□□□ -0.24
SSH3-211ENST00000534112 IGLV10-54A0A075B6I4 117 aa13.56□□□□□ -0.24
SSH3-211ENST00000534112 hDV102S1A0JD36 115 aa13.56□□□□□ -0.24
SSH3-211ENST00000534112 PDE6DO43924 150 aa13.56□□□□□ -0.24
SSH3-211ENST00000534112 OR5AL1P0C617 328 aa13.56□□□□□ -0.24
SSH3-211ENST00000534112 SSTP61278 116 aa13.56□□□□□ -0.24
SSH3-211ENST00000534112 IQCJQ1A5X6 159 aa13.56□□□□□ -0.24
SSH3-211ENST00000534112 KIF25-AS1Q9Y6Z4 181 aa13.56□□□□□ -0.24
SSH3-211ENST00000534112 REG3AQ06141 175 aa13.55□□□□□ -0.24
SSH3-211ENST00000534112 IGHV3-64A0A075B6Q5 118 aa13.54□□□□□ -0.24
SSH3-211ENST00000534112 A0A087WYN8 130 aa13.54□□□□□ -0.24
SSH3-211ENST00000534112 RPL35P42766 123 aaKnown RBP13.54□□□□□ -0.24
SSH3-211ENST00000534112 MLST8Q9BVC4 326 aa13.54□□□□□ -0.24
SSH3-211ENST00000534112 IGHV1-24A0A0C4DH33 117 aa13.53□□□□□ -0.24
SSH3-211ENST00000534112 SLPIP03973 132 aa13.53□□□□□ -0.24
SSH3-211ENST00000534112 SMIM17P0DL12 118 aa13.53□□□□□ -0.24
SSH3-211ENST00000534112 BAGE2Q86Y30 109 aa13.53□□□□□ -0.24
SSH3-211ENST00000534112 RNF185Q96GF1 192 aa13.53□□□□□ -0.24
SSH3-211ENST00000534112 CHTF8P0CG12 524 aa13.52□□□□□ -0.25
SSH3-211ENST00000534112 C20orf203Q8NBC4 194 aa13.52□□□□□ -0.25
SSH3-211ENST00000534112 AP5S1Q9NUS5 200 aa13.52□□□□□ -0.25
SSH3-211ENST00000534112 TRAV16A0A0A6YYK6 109 aaPredicted RBP13.51□□□□□ -0.25
SSH3-211ENST00000534112 TRAV8-4A0A0B4J246 113 aa13.51□□□□□ -0.25
SSH3-211ENST00000534112 P01737 135 aa13.51□□□□□ -0.25
SSH3-211ENST00000534112 SPACA4Q8TDM5 124 aa13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 68.1 ms