RNA–Protein interactions for RNA: ENST00000533897.1

CTSC-208, Transcript of cathepsin C, humanhuman

TSL 2

Gene CTSC, Length 4,344 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSC-208ENST00000533897 Q6ZSN1 163 aa3.22□□□□□ -1.89
CTSC-208ENST00000533897 SPANXDQ9BXN6 97 aa3.22□□□□□ -1.89
CTSC-208ENST00000533897 SPANXCQ9NY87 97 aa3.22□□□□□ -1.89
CTSC-208ENST00000533897 MUC6Q6W4X9 2439 aa3.21□□□□□ -1.89
CTSC-208ENST00000533897 IGHV4-30-2A0A087WSY4 118 aa3.21□□□□□ -1.9
CTSC-208ENST00000533897 J3QQQ9 107 aa3.21□□□□□ -1.9
CTSC-208ENST00000533897 NHLRC4P0CG21 123 aaPredicted RBP3.21□□□□□ -1.9
CTSC-208ENST00000533897 Q6ZUT4 128 aa3.21□□□□□ -1.9
CTSC-208ENST00000533897 WFDC12Q8WWY7 111 aa3.21□□□□□ -1.9
CTSC-208ENST00000533897 PPDPFQ9H3Y8 114 aa3.21□□□□□ -1.9
CTSC-208ENST00000533897 C22orf24Q9Y442 160 aa3.21□□□□□ -1.9
CTSC-208ENST00000533897 ZANQ9Y493 2812 aa3.21□□□□□ -1.9
CTSC-208ENST00000533897 TRBV20-1A0A075B6N2 111 aa3.21□□□□□ -1.9
CTSC-208ENST00000533897 H3BUX3 64 aa3.21□□□□□ -1.9
CTSC-208ENST00000533897 SPXQ9BT56 116 aa3.21□□□□□ -1.9
CTSC-208ENST00000533897 A0A087WWL8 130 aa3.21□□□□□ -1.9
CTSC-208ENST00000533897 A0A0J9YXY3 114 aa3.21□□□□□ -1.9
CTSC-208ENST00000533897 BEAN1Q3B7T3 259 aa3.21□□□□□ -1.9
CTSC-208ENST00000533897 ADAMTSL4-AS1Q5T5F5 129 aa3.21□□□□□ -1.9
CTSC-208ENST00000533897 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP3.21□□□□□ -1.9
CTSC-208ENST00000533897 IGHV3OR16-10A0A075B7F0 116 aa3.2□□□□□ -1.9
CTSC-208ENST00000533897 TRBV30A0A0K0K1B3 111 aa3.2□□□□□ -1.9
CTSC-208ENST00000533897 MT-ATP8P03928 68 aa3.2□□□□□ -1.9
CTSC-208ENST00000533897 SRD5A1P18405 259 aa3.2□□□□□ -1.9
CTSC-208ENST00000533897 TRPT1Q86TN4 253 aaKnown RBP3.2□□□□□ -1.9
CTSC-208ENST00000533897 ZNF702PQ9H963 129 aa3.2□□□□□ -1.9
CTSC-208ENST00000533897 UBE2D4Q9Y2X8 147 aa3.2□□□□□ -1.9
CTSC-208ENST00000533897 SPTBN1Q01082 2364 aaKnown RBP3.2□□□□□ -1.9
CTSC-208ENST00000533897 DOPEY2Q9Y3R5 2298 aa3.2□□□□□ -1.9
CTSC-208ENST00000533897 TRAV2A0A0B4J234 112 aa3.2□□□□□ -1.9
CTSC-208ENST00000533897 IGHV3-11P01762 117 aa3.2□□□□□ -1.9
CTSC-208ENST00000533897 MGPP08493 103 aa3.2□□□□□ -1.9
CTSC-208ENST00000533897 RPL24P83731 157 aaKnown RBP3.2□□□□□ -1.9
CTSC-208ENST00000533897 ZNF418Q8TF45 676 aaPredicted RBP3.2□□□□□ -1.9
CTSC-208ENST00000533897 CLUHP3Q96NS8 147 aa3.2□□□□□ -1.9
CTSC-208ENST00000533897 PRO1854Q9UHT4 67 aa3.2□□□□□ -1.9
CTSC-208ENST00000533897 PRRC2AP48634 2157 aaKnown RBP3.2□□□□□ -1.9
CTSC-208ENST00000533897 IGHV1OR15-1A0A075B7D0 117 aa3.2□□□□□ -1.9
CTSC-208ENST00000533897 TRAV12-3A0A0B4J271 114 aa3.2□□□□□ -1.9
CTSC-208ENST00000533897 A4D1N5 150 aa3.2□□□□□ -1.9
CTSC-208ENST00000533897 APOMO95445 188 aa3.2□□□□□ -1.9
CTSC-208ENST00000533897 MSMBP08118 114 aa3.2□□□□□ -1.9
CTSC-208ENST00000533897 EMP1P54849 157 aa3.2□□□□□ -1.9
CTSC-208ENST00000533897 ANKRD29Q8N6D5 301 aa3.2□□□□□ -1.9
CTSC-208ENST00000533897 MRPL16Q9NX20 251 aaKnown RBP3.2□□□□□ -1.9
CTSC-208ENST00000533897 SMAGPQ0VAQ4 97 aa3.2□□□□□ -1.9
CTSC-208ENST00000533897 SYT8Q8NBV8 401 aa3.2□□□□□ -1.9
CTSC-208ENST00000533897 PPDPFLQ8WWR9 84 aa3.2□□□□□ -1.9
CTSC-208ENST00000533897 DNAH1Q9P2D7 4330 aa3.2□□□□□ -1.9
CTSC-208ENST00000533897 TINCRA0A1B0GVN0 87 aa3.19□□□□□ -1.9
CTSC-208ENST00000533897 I3L3M4 83 aa3.19□□□□□ -1.9
CTSC-208ENST00000533897 TIMM17BO60830 172 aa3.19□□□□□ -1.9
CTSC-208ENST00000533897 FLNCQ14315 2725 aa3.19□□□□□ -1.9
CTSC-208ENST00000533897 TRAV12-2A0A075B6T6 113 aa3.19□□□□□ -1.9
CTSC-208ENST00000533897 IGLV5-39A0A0G2JS06 123 aa3.19□□□□□ -1.9
CTSC-208ENST00000533897 IGHV3-30-3P0DP02 117 aa3.19□□□□□ -1.9
CTSC-208ENST00000533897 PROK1P58294 105 aa3.19□□□□□ -1.9
CTSC-208ENST00000533897 FAM159AQ6UWV7 190 aa3.19□□□□□ -1.9
CTSC-208ENST00000533897 MUSTN1Q8IVN3 82 aa3.19□□□□□ -1.9
CTSC-208ENST00000533897 KIR2DL4Q99706 377 aa3.19□□□□□ -1.9
CTSC-208ENST00000533897 YAE1D1Q9NRH1 226 aa3.19□□□□□ -1.9
CTSC-208ENST00000533897 RP1L1Q8IWN7 2480 aaPredicted RBP3.19□□□□□ -1.9
CTSC-208ENST00000533897 VSIG2Q96IQ7 327 aa3.19□□□□□ -1.9
CTSC-208ENST00000533897 CMYA5Q8N3K9 4069 aa3.18□□□□□ -1.9
CTSC-208ENST00000533897 MED13LQ71F56 2210 aa3.18□□□□□ -1.9
CTSC-208ENST00000533897 IGHV1-58A0A0C4DH39 117 aa3.18□□□□□ -1.9
CTSC-208ENST00000533897 A0A0J9YXV3 536 aa3.18□□□□□ -1.9
CTSC-208ENST00000533897 TRIAP1O43715 76 aa3.18□□□□□ -1.9
CTSC-208ENST00000533897 ZFAND6Q6FIF0 208 aa3.18□□□□□ -1.9
CTSC-208ENST00000533897 ANK2Q01484 3957 aa3.18□□□□□ -1.9
CTSC-208ENST00000533897 TGFAP01135 160 aa3.18□□□□□ -1.9
CTSC-208ENST00000533897 IGHV4-59P01825 116 aa3.18□□□□□ -1.9
CTSC-208ENST00000533897 ZNF688P0C7X2 276 aa3.18□□□□□ -1.9
CTSC-208ENST00000533897 GNLYP22749 145 aa3.18□□□□□ -1.9
CTSC-208ENST00000533897 S100A4P26447 101 aaKnown RBP3.18□□□□□ -1.9
CTSC-208ENST00000533897 LY6EQ16553 131 aa3.18□□□□□ -1.9
CTSC-208ENST00000533897 ERG28Q9UKR5 140 aa3.18□□□□□ -1.9
CTSC-208ENST00000533897 H3BMM0 161 aa3.18□□□□□ -1.9
CTSC-208ENST00000533897 GATA3P23771 443 aa3.18□□□□□ -1.9
CTSC-208ENST00000533897 ID1P41134 155 aa3.18□□□□□ -1.9
CTSC-208ENST00000533897 PSMB2P49721 201 aa3.18□□□□□ -1.9
CTSC-208ENST00000533897 LY6DQ14210 128 aa3.18□□□□□ -1.9
CTSC-208ENST00000533897 DEFB112Q30KQ8 113 aa3.18□□□□□ -1.9
CTSC-208ENST00000533897 Q6YL49 198 aa3.18□□□□□ -1.9
CTSC-208ENST00000533897 KRTAP1-3Q8IUG1 177 aa3.18□□□□□ -1.9
CTSC-208ENST00000533897 UBE2E2Q96LR5 201 aa3.18□□□□□ -1.9
CTSC-208ENST00000533897 IGSF10Q6WRI0 2623 aa3.18□□□□□ -1.9
CTSC-208ENST00000533897 F5H768 121 aa3.17□□□□□ -1.9
CTSC-208ENST00000533897 H7C423 109 aa3.17□□□□□ -1.9
CTSC-208ENST00000533897 PF4P02776 101 aa3.17□□□□□ -1.9
CTSC-208ENST00000533897 HERVK_113P61574 105 aa3.17□□□□□ -1.9
CTSC-208ENST00000533897 MIAQ16674 131 aa3.17□□□□□ -1.9
CTSC-208ENST00000533897 Q6Q795 121 aa3.17□□□□□ -1.9
CTSC-208ENST00000533897 TIMM21Q9BVV7 248 aa3.17□□□□□ -1.9
CTSC-208ENST00000533897 RS1O15537 224 aa3.17□□□□□ -1.9
CTSC-208ENST00000533897 SPINK13Q1W4C9 94 aa3.17□□□□□ -1.9
CTSC-208ENST00000533897 DEFB104AQ8WTQ1 72 aa3.17□□□□□ -1.9
CTSC-208ENST00000533897 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP3.17□□□□□ -1.94e-10■■■■□ 20.9
CTSC-208ENST00000533897 CRLF1O75462 422 aa3.17□□□□□ -1.9
CTSC-208ENST00000533897 IGHV3-53P01767 116 aa3.17□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms