RNA–Protein interactions for RNA: ENST00000533820.5

CAPN1-226, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN1, Length 3,083 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-226ENST00000533820 TMEM262E9PQX1 116 aa14.48□□□□□ -0.09
CAPN1-226ENST00000533820 ACACBO00763 2458 aa14.48□□□□□ -0.09
CAPN1-226ENST00000533820 GNLYP22749 145 aa14.48□□□□□ -0.09
CAPN1-226ENST00000533820 TAL2Q16559 108 aa14.48□□□□□ -0.09
CAPN1-226ENST00000533820 C10orf99Q6UWK7 81 aa14.48□□□□□ -0.09
CAPN1-226ENST00000533820 MYO9AB2RTY4 2548 aa14.47□□□□□ -0.09
CAPN1-226ENST00000533820 TMEM170BQ5T4T1 132 aa14.47□□□□□ -0.09
CAPN1-226ENST00000533820 NRGNQ92686 78 aa14.47□□□□□ -0.09
CAPN1-226ENST00000533820 OPRPNQ99935 248 aaPredicted RBP14.47□□□□□ -0.09
CAPN1-226ENST00000533820 CHCHD5Q9BSY4 110 aa14.47□□□□□ -0.09
CAPN1-226ENST00000533820 CRYGDP07320 174 aa14.47□□□□□ -0.09
CAPN1-226ENST00000533820 TSHBP01222 138 aa14.46□□□□□ -0.09
CAPN1-226ENST00000533820 SUMO4Q6EEV6 95 aa14.46□□□□□ -0.09
CAPN1-226ENST00000533820 VCX2Q9H322 139 aa14.45□□□□□ -0.1
CAPN1-226ENST00000533820 TCL1BO95988 128 aa14.45□□□□□ -0.1
CAPN1-226ENST00000533820 DAZ1Q9NQZ3 744 aaKnown RBP14.45□□□□□ -0.1
CAPN1-226ENST00000533820 IGHV3-64A0A075B6Q5 118 aa14.44□□□□□ -0.1
CAPN1-226ENST00000533820 HTN1P15515 57 aa14.44□□□□□ -0.1
CAPN1-226ENST00000533820 LINC00315P59091 139 aa14.44□□□□□ -0.1
CAPN1-226ENST00000533820 TLN2Q9Y4G6 2542 aa14.44□□□□□ -0.1
CAPN1-226ENST00000533820 SDHAF1A6NFY7 115 aa14.44□□□□□ -0.1
CAPN1-226ENST00000533820 SMIM9A6NGZ8 99 aa14.44□□□□□ -0.1
CAPN1-226ENST00000533820 MDFICQ9P1T7 246 aa14.44□□□□□ -0.1
CAPN1-226ENST00000533820 IGHG2P01859 326 aa14.43□□□□□ -0.1
CAPN1-226ENST00000533820 DUX5Q96PT3 197 aa14.43□□□□□ -0.1
CAPN1-226ENST00000533820 USMG5Q96IX5 58 aa14.43□□□□□ -0.1
CAPN1-226ENST00000533820 ZNF56Q15929 161 aa14.42□□□□□ -0.1
CAPN1-226ENST00000533820 FAM19A4Q96LR4 140 aa14.42□□□□□ -0.1
CAPN1-226ENST00000533820 KIF25-AS1Q9Y6Z4 181 aa14.42□□□□□ -0.1
CAPN1-226ENST00000533820 IGLV4-69A0A075B6H9 119 aa14.42□□□□□ -0.1
CAPN1-226ENST00000533820 IGHV4-30-2A0A087WSY4 118 aa14.42□□□□□ -0.1
CAPN1-226ENST00000533820 TRAV25A0A0B4J276 109 aa14.42□□□□□ -0.1
CAPN1-226ENST00000533820 SCGB1C2P0DMR2 95 aa14.42□□□□□ -0.1
CAPN1-226ENST00000533820 TSPEAR-AS2P59090 65 aa14.42□□□□□ -0.1
CAPN1-226ENST00000533820 C15orf53Q8NAA6 179 aa14.42□□□□□ -0.1
CAPN1-226ENST00000533820 ZFYVE26Q68DK2 2539 aa14.41□□□□□ -0.1
CAPN1-226ENST00000533820 AVPP01185 164 aa14.41□□□□□ -0.1
CAPN1-226ENST00000533820 PIMREGQ9BSJ6 248 aa14.41□□□□□ -0.1
CAPN1-226ENST00000533820 NACAE9PAV3 2078 aa14.4□□□□□ -0.1
CAPN1-226ENST00000533820 SPINK13Q1W4C9 94 aa14.4□□□□□ -0.1
CAPN1-226ENST00000533820 A6NDX4 124 aa14.39□□□□□ -0.11
CAPN1-226ENST00000533820 COX6B1P14854 86 aa14.39□□□□□ -0.11
CAPN1-226ENST00000533820 CCL19Q99731 98 aa14.39□□□□□ -0.11
CAPN1-226ENST00000533820 IGIPA6NJ69 53 aa14.39□□□□□ -0.11
CAPN1-226ENST00000533820 PMVKQ15126 192 aa14.39□□□□□ -0.11
CAPN1-226ENST00000533820 ZNRF2Q8NHG8 242 aa14.39□□□□□ -0.11
CAPN1-226ENST00000533820 CRIP2P52943 208 aaPredicted RBP14.38□□□□□ -0.11
CAPN1-226ENST00000533820 SETD2Q9BYW2 2564 aaPredicted RBP14.38□□□□□ -0.11
CAPN1-226ENST00000533820 KLLNB2CW77 178 aa14.38□□□□□ -0.11
CAPN1-226ENST00000533820 POLR2KP53803 58 aaKnown RBP14.38□□□□□ -0.11
CAPN1-226ENST00000533820 LINC01587Q99440 93 aa14.38□□□□□ -0.11
CAPN1-226ENST00000533820 KLK5Q9Y337 293 aaPredicted RBP14.38□□□□□ -0.11
CAPN1-226ENST00000533820 C2CD3Q4AC94 2353 aa14.38□□□□□ -0.11
CAPN1-226ENST00000533820 IGHV3-73A0A0B4J1V6 119 aa14.38□□□□□ -0.11
CAPN1-226ENST00000533820 H7C2G1 150 aa14.38□□□□□ -0.11
CAPN1-226ENST00000533820 VCYO14598 125 aa14.38□□□□□ -0.11
CAPN1-226ENST00000533820 DCANP1Q8TF63 244 aa14.38□□□□□ -0.11
CAPN1-226ENST00000533820 C9JAW5 83 aa14.37□□□□□ -0.11
CAPN1-226ENST00000533820 PPP1R17O96001 155 aa14.37□□□□□ -0.11
CAPN1-226ENST00000533820 FAM19A5Q7Z5A7 132 aaPredicted RBP14.37□□□□□ -0.11
CAPN1-226ENST00000533820 TMEM126AQ9H061 195 aa14.37□□□□□ -0.11
CAPN1-226ENST00000533820 HERVK_113P61574 105 aa14.37□□□□□ -0.11
CAPN1-226ENST00000533820 Q8N1Y9 231 aa14.37□□□□□ -0.11
CAPN1-226ENST00000533820 MAPK1IP1LQ8NDC0 245 aa14.37□□□□□ -0.11
CAPN1-226ENST00000533820 A0A0J9YY99 117 aa14.36□□□□□ -0.11
CAPN1-226ENST00000533820 MXRA5Q9NR99 2828 aa14.36□□□□□ -0.11
CAPN1-226ENST00000533820 MED14OSP0DP75 135 aa14.36□□□□□ -0.11
CAPN1-226ENST00000533820 ANKRD17O75179 2603 aaKnown RBP14.36□□□□□ -0.11
CAPN1-226ENST00000533820 PRM2P04554 102 aa14.35□□□□□ -0.11
CAPN1-226ENST00000533820 NTN5Q8WTR8 489 aaPredicted RBP14.35□□□□□ -0.11
CAPN1-226ENST00000533820 ABCA12Q86UK0 2595 aa14.35□□□□□ -0.11
CAPN1-226ENST00000533820 IGHV4-59P01825 116 aa14.35□□□□□ -0.11
CAPN1-226ENST00000533820 APRG1Q8IVJ8 170 aa14.35□□□□□ -0.11
CAPN1-226ENST00000533820 C10orf105Q8TEF2 133 aa14.35□□□□□ -0.11
CAPN1-226ENST00000533820 DNAJC30Q96LL9 226 aa14.35□□□□□ -0.11
CAPN1-226ENST00000533820 LRRK2Q5S007 2527 aa14.35□□□□□ -0.11
CAPN1-226ENST00000533820 DOPEY1Q5JWR5 2465 aa14.35□□□□□ -0.11
CAPN1-226ENST00000533820 SLC25A20O43772 301 aa14.35□□□□□ -0.11
CAPN1-226ENST00000533820 EDA2RQ9HAV5 297 aa14.35□□□□□ -0.11
CAPN1-226ENST00000533820 WNK1Q9H4A3 2382 aa14.35□□□□□ -0.11
CAPN1-226ENST00000533820 IGHV4OR15-8A0A075B7B6 117 aa14.34□□□□□ -0.11
CAPN1-226ENST00000533820 A0A087WW49 117 aa14.34□□□□□ -0.11
CAPN1-226ENST00000533820 IGLV1-40P01703 118 aa14.34□□□□□ -0.11
CAPN1-226ENST00000533820 SYNJ2BPP57105 145 aa14.34□□□□□ -0.11
CAPN1-226ENST00000533820 TRPT1Q86TN4 253 aaKnown RBP14.34□□□□□ -0.11
CAPN1-226ENST00000533820 PTPN13Q12923 2485 aa14.33□□□□□ -0.11
CAPN1-226ENST00000533820 ODF3Q96PU9 254 aa14.33□□□□□ -0.11
CAPN1-226ENST00000533820 ZNF580Q9UK33 172 aa14.33□□□□□ -0.11
CAPN1-226ENST00000533820 MSMBP08118 114 aa14.33□□□□□ -0.12
CAPN1-226ENST00000533820 UBE2D1P51668 147 aa14.33□□□□□ -0.12
CAPN1-226ENST00000533820 UBE2D3P61077 147 aa14.33□□□□□ -0.12
CAPN1-226ENST00000533820 UBE2D2P62837 147 aa14.33□□□□□ -0.12
CAPN1-226ENST00000533820 NXPH4O95158 308 aa14.33□□□□□ -0.12
CAPN1-226ENST00000533820 PIEZO1Q92508 2521 aa14.32□□□□□ -0.12
CAPN1-226ENST00000533820 ADARB2-AS1A8MUL3 147 aa14.32□□□□□ -0.12
CAPN1-226ENST00000533820 NDUFA11Q86Y39 141 aa14.32□□□□□ -0.12
CAPN1-226ENST00000533820 IGHV3-16A0A0C4DH30 117 aa14.32□□□□□ -0.12
CAPN1-226ENST00000533820 LINC01619G3V211 115 aa14.32□□□□□ -0.12
CAPN1-226ENST00000533820 J3QQQ9 107 aa14.32□□□□□ -0.12
CAPN1-226ENST00000533820 LGALS3P17931 250 aaKnown RBP14.32□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 330.9 ms