RNA–Protein interactions for RNA: ENST00000533727.5

AMBRA1-211, Transcript of autophagy and beclin 1 regulator 1, humanhuman

TSL 1 (best) BASIC

Gene AMBRA1, Length 4,817 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1-211ENST00000533727 FAM236BA0A1B0GV22 79 aa8.6□□□□□ -1.03
AMBRA1-211ENST00000533727 LYRM9A8MSI8 78 aa8.6□□□□□ -1.03
AMBRA1-211ENST00000533727 GNRH2O43555 120 aa8.6□□□□□ -1.03
AMBRA1-211ENST00000533727 TRBV6-1A0A0K0K1D8 114 aa8.6□□□□□ -1.03
AMBRA1-211ENST00000533727 CCDC140Q96MF4 163 aa8.6□□□□□ -1.03
AMBRA1-211ENST00000533727 IGHV3-38A0A0C4DH36 116 aa8.6□□□□□ -1.03
AMBRA1-211ENST00000533727 IGLV2-14P01704 120 aa8.6□□□□□ -1.03
AMBRA1-211ENST00000533727 PATE2Q6UY27 113 aa8.6□□□□□ -1.03
AMBRA1-211ENST00000533727 NDUFC2O95298 119 aa8.59□□□□□ -1.03
AMBRA1-211ENST00000533727 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP8.59□□□□□ -1.03
AMBRA1-211ENST00000533727 CDSNQ15517 529 aa8.59□□□□□ -1.03
AMBRA1-211ENST00000533727 A0A096LPF7 62 aa8.59□□□□□ -1.03
AMBRA1-211ENST00000533727 CDK2AP2O75956 126 aa8.59□□□□□ -1.03
AMBRA1-211ENST00000533727 CRYGBP07316 175 aa8.59□□□□□ -1.03
AMBRA1-211ENST00000533727 EGR2P11161 476 aaPredicted RBP8.59□□□□□ -1.03
AMBRA1-211ENST00000533727 DSCR8Q96T75 97 aa8.59□□□□□ -1.03
AMBRA1-211ENST00000533727 PRO0255Q9UI72 69 aa8.59□□□□□ -1.03
AMBRA1-211ENST00000533727 UNQ9165/PRO28630Q6UXU0 137 aa8.59□□□□□ -1.04
AMBRA1-211ENST00000533727 PRSS47A8MTI9 375 aa8.58□□□□□ -1.04
AMBRA1-211ENST00000533727 LINC01620Q4KN68 170 aa8.58□□□□□ -1.04
AMBRA1-211ENST00000533727 HHLA3Q9XRX5 114 aa8.58□□□□□ -1.04
AMBRA1-211ENST00000533727 EML6Q6ZMW3 1958 aa8.58□□□□□ -1.04
AMBRA1-211ENST00000533727 SUMO4Q6EEV6 95 aa8.58□□□□□ -1.04
AMBRA1-211ENST00000533727 A0A1B0GX51 115 aa8.58□□□□□ -1.04
AMBRA1-211ENST00000533727 MIFP14174 115 aa8.58□□□□□ -1.04
AMBRA1-211ENST00000533727 CCDC168Q8NDH2 2452 aa8.58□□□□□ -1.04
AMBRA1-211ENST00000533727 K7EQG2 157 aa8.57□□□□□ -1.04
AMBRA1-211ENST00000533727 P0C879 139 aa8.57□□□□□ -1.04
AMBRA1-211ENST00000533727 C14orf177Q52M58 125 aa8.57□□□□□ -1.04
AMBRA1-211ENST00000533727 Q8N6K4 173 aa8.57□□□□□ -1.04
AMBRA1-211ENST00000533727 TRBV12-3P01733 135 aa8.57□□□□□ -1.04
AMBRA1-211ENST00000533727 ZNF295-AS1Q8N0V1 137 aa8.57□□□□□ -1.04
AMBRA1-211ENST00000533727 A0A0B4J2C4 111 aa8.57□□□□□ -1.04
AMBRA1-211ENST00000533727 TRBV10-1A0A0K0K1A3 114 aa8.57□□□□□ -1.04
AMBRA1-211ENST00000533727 NCOA6Q14686 2063 aaPredicted RBP8.57□□□□□ -1.04
AMBRA1-211ENST00000533727 KRTAP10-9P60411 292 aa8.56□□□□□ -1.04
AMBRA1-211ENST00000533727 PSMB8P28062 276 aa8.56□□□□□ -1.04
AMBRA1-211ENST00000533727 Q9HAA7 133 aa8.56□□□□□ -1.04
AMBRA1-211ENST00000533727 A4D1N5 150 aa8.56□□□□□ -1.04
AMBRA1-211ENST00000533727 ZNF503Q96F45 646 aa8.56□□□□□ -1.04
AMBRA1-211ENST00000533727 BBC3Q96PG8 261 aaPredicted RBP8.56□□□□□ -1.04
AMBRA1-211ENST00000533727 ARHGAP21Q5T5U3 1957 aa8.56□□□□□ -1.04
AMBRA1-211ENST00000533727 SONP18583 2426 aaKnown RBP8.56□□□□□ -1.04
AMBRA1-211ENST00000533727 TRAV4A0A0B4J268 109 aa8.56□□□□□ -1.04
AMBRA1-211ENST00000533727 FAM167A-AS1Q96KT0 104 aa8.56□□□□□ -1.04
AMBRA1-211ENST00000533727 E7EUB6 86 aa8.55□□□□□ -1.04
AMBRA1-211ENST00000533727 HERV-K104P63124 156 aa8.55□□□□□ -1.04
AMBRA1-211ENST00000533727 Q8N1Y9 231 aa8.55□□□□□ -1.04
AMBRA1-211ENST00000533727 TLN1Q9Y490 2541 aaKnown RBP8.55□□□□□ -1.04
AMBRA1-211ENST00000533727 TTTY13Q9BZ97 58 aa8.55□□□□□ -1.04
AMBRA1-211ENST00000533727 LINC01548A6NM66 108 aa8.55□□□□□ -1.04
AMBRA1-211ENST00000533727 KIR2DL5BQ8NHK3 375 aa8.55□□□□□ -1.04
AMBRA1-211ENST00000533727 RNF183Q96D59 192 aa8.55□□□□□ -1.04
AMBRA1-211ENST00000533727 NXPH4O95158 308 aa8.54□□□□□ -1.04
AMBRA1-211ENST00000533727 TRBV7-3A0A075B6L6 115 aa8.54□□□□□ -1.04
AMBRA1-211ENST00000533727 PROP1O75360 226 aa8.54□□□□□ -1.04
AMBRA1-211ENST00000533727 GATA1P15976 413 aaPredicted RBP8.54□□□□□ -1.04
AMBRA1-211ENST00000533727 ORMDL1Q9P0S3 153 aa8.54□□□□□ -1.04
AMBRA1-211ENST00000533727 RBX1P62877 108 aa8.53□□□□□ -1.04
AMBRA1-211ENST00000533727 UBE2BP63146 152 aa8.53□□□□□ -1.04
AMBRA1-211ENST00000533727 Q6ZQT7 251 aa8.53□□□□□ -1.04
AMBRA1-211ENST00000533727 ZNF580Q9UK33 172 aa8.53□□□□□ -1.04
AMBRA1-211ENST00000533727 GOLGB1Q14789 3259 aaKnown RBP8.53□□□□□ -1.04
AMBRA1-211ENST00000533727 SPATA12Q7Z6I5 190 aa8.52□□□□□ -1.04
AMBRA1-211ENST00000533727 MUSTN1Q8IVN3 82 aa8.52□□□□□ -1.04
AMBRA1-211ENST00000533727 C16orf95Q9H693 158 aa8.52□□□□□ -1.04
AMBRA1-211ENST00000533727 H3BT86 120 aa8.52□□□□□ -1.05
AMBRA1-211ENST00000533727 IGKV3D-7A0A0C4DH55 119 aa8.52□□□□□ -1.05
AMBRA1-211ENST00000533727 TRBV10-2A0A0K0K1G8 114 aa8.52□□□□□ -1.05
AMBRA1-211ENST00000533727 COX7A2LO14548 114 aa8.52□□□□□ -1.05
AMBRA1-211ENST00000533727 EIF4EBP1Q13541 118 aaPredicted RBP8.52□□□□□ -1.05
AMBRA1-211ENST00000533727 Q6ZUT4 128 aa8.52□□□□□ -1.05
AMBRA1-211ENST00000533727 Q9H8V8 135 aa8.52□□□□□ -1.05
AMBRA1-211ENST00000533727 MRPL36Q9P0J6 103 aaKnown RBP8.52□□□□□ -1.05
AMBRA1-211ENST00000533727 TRAV10A0A0B4J240 114 aa8.51□□□□□ -1.05
AMBRA1-211ENST00000533727 IGLV1-40P01703 118 aa8.51□□□□□ -1.05
AMBRA1-211ENST00000533727 XCL1P47992 114 aa8.51□□□□□ -1.05
AMBRA1-211ENST00000533727 PRAC2D3DTV9 90 aa8.51□□□□□ -1.05
AMBRA1-211ENST00000533727 CAMK2N2Q96S95 79 aa8.51□□□□□ -1.05
AMBRA1-211ENST00000533727 SLC25A29Q8N8R3 303 aa8.51□□□□□ -1.05
AMBRA1-211ENST00000533727 PTH2Q96A98 100 aa8.51□□□□□ -1.05
AMBRA1-211ENST00000533727 COL4A2P08572 1712 aa8.5□□□□□ -1.05
AMBRA1-211ENST00000533727 H0YGX0 51 aa8.5□□□□□ -1.05
AMBRA1-211ENST00000533727 IGHV3-30P01768 117 aa8.5□□□□□ -1.05
AMBRA1-211ENST00000533727 IGHV3-33P01772 117 aa8.5□□□□□ -1.05
AMBRA1-211ENST00000533727 IGHV3-30-3P0DP02 117 aa8.5□□□□□ -1.05
AMBRA1-211ENST00000533727 IGHV3-30-5P0DP03 117 aa8.5□□□□□ -1.05
AMBRA1-211ENST00000533727 RNASE13Q5GAN3 156 aaKnown RBP8.5□□□□□ -1.05
AMBRA1-211ENST00000533727 HIVEP3Q5T1R4 2406 aa8.5□□□□□ -1.05
AMBRA1-211ENST00000533727 IGKV1D-37A0A075B6S9 117 aa8.5□□□□□ -1.05
AMBRA1-211ENST00000533727 FRMD6-AS1P0C7T7 363 aa8.5□□□□□ -1.05
AMBRA1-211ENST00000533727 CRIP3Q6Q6R5 217 aa8.5□□□□□ -1.05
AMBRA1-211ENST00000533727 GTSF1Q8WW33 167 aa8.5□□□□□ -1.05
AMBRA1-211ENST00000533727 CXCL5P42830 114 aa8.5□□□□□ -1.05
AMBRA1-211ENST00000533727 KMT2EQ8IZD2 1858 aa8.5□□□□□ -1.05
AMBRA1-211ENST00000533727 DEFB131BA0A096LNP1 70 aa8.5□□□□□ -1.05
AMBRA1-211ENST00000533727 NDUFV3P56181 108 aaKnown RBP8.5□□□□□ -1.05
AMBRA1-211ENST00000533727 E9PLD3 99 aa8.49□□□□□ -1.05
AMBRA1-211ENST00000533727 C5orf47Q569G3 176 aa8.49□□□□□ -1.05
AMBRA1-211ENST00000533727 CLPSL2Q6UWE3 100 aa8.49□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms