RNA–Protein interactions for RNA: ENST00000533667.5

CTNND1-236, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 4,990 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-236ENST00000533667 BLCAPP62952 87 aa5.38□□□□□ -1.55
CTNND1-236ENST00000533667 APRG1Q8IVJ8 170 aa5.38□□□□□ -1.55
CTNND1-236ENST00000533667 WFDC11Q8NEX6 87 aa5.38□□□□□ -1.55
CTNND1-236ENST00000533667 SHANK1Q9Y566 2161 aa5.38□□□□□ -1.55
CTNND1-236ENST00000533667 FSTL3O95633 263 aa5.38□□□□□ -1.55
CTNND1-236ENST00000533667 MYCNOSP40205 109 aa5.38□□□□□ -1.55
CTNND1-236ENST00000533667 ODF3Q96PU9 254 aa5.38□□□□□ -1.55
CTNND1-236ENST00000533667 DEFB136Q30KP8 78 aa5.38□□□□□ -1.55
CTNND1-236ENST00000533667 Q6ZQT7 251 aa5.38□□□□□ -1.55
CTNND1-236ENST00000533667 SERP1Q9Y6X1 66 aa5.38□□□□□ -1.55
CTNND1-236ENST00000533667 IGHV1-58A0A0C4DH39 117 aa5.38□□□□□ -1.55
CTNND1-236ENST00000533667 PDE6GP18545 87 aa5.38□□□□□ -1.55
CTNND1-236ENST00000533667 SEM1Q6ZVN7 128 aa5.38□□□□□ -1.55
CTNND1-236ENST00000533667 C20orf203Q8NBC4 194 aa5.38□□□□□ -1.55
CTNND1-236ENST00000533667 IGHV4OR15-8A0A075B7B6 117 aa5.37□□□□□ -1.55
CTNND1-236ENST00000533667 A0A087WW49 117 aa5.37□□□□□ -1.55
CTNND1-236ENST00000533667 NDUFA1O15239 70 aa5.37□□□□□ -1.55
CTNND1-236ENST00000533667 CRYGBP07316 175 aa5.37□□□□□ -1.55
CTNND1-236ENST00000533667 RPS28P62857 69 aaKnown RBP5.37□□□□□ -1.55
CTNND1-236ENST00000533667 SERP2Q8N6R1 65 aa5.37□□□□□ -1.55
CTNND1-236ENST00000533667 C4orf3Q8WVX3 66 aa5.37□□□□□ -1.55
CTNND1-236ENST00000533667 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP5.37□□□□□ -1.559e-7■■■□□ 18
CTNND1-236ENST00000533667 ADORA2A-AS1P86434 159 aa5.37□□□□□ -1.55
CTNND1-236ENST00000533667 PMAIP1Q13794 54 aa5.37□□□□□ -1.55
CTNND1-236ENST00000533667 FANCD2OSQ96PS1 177 aa5.37□□□□□ -1.55
CTNND1-236ENST00000533667 CGB7P0DN87 165 aa5.37□□□□□ -1.55
CTNND1-236ENST00000533667 CCL18P55774 89 aa5.37□□□□□ -1.55
CTNND1-236ENST00000533667 RPL39P62891 51 aaKnown RBP5.37□□□□□ -1.55
CTNND1-236ENST00000533667 SPTSSBQ8NFR3 76 aa5.37□□□□□ -1.55
CTNND1-236ENST00000533667 IGKV1D-37A0A075B6S9 117 aa5.36□□□□□ -1.55
CTNND1-236ENST00000533667 A0A0J9YX75 114 aa5.36□□□□□ -1.55
CTNND1-236ENST00000533667 LGALS9O00182 355 aa5.36□□□□□ -1.55
CTNND1-236ENST00000533667 LINC00526Q96FQ7 95 aa5.36□□□□□ -1.55
CTNND1-236ENST00000533667 MDFICQ9P1T7 246 aa5.36□□□□□ -1.55
CTNND1-236ENST00000533667 PPDPFQ9H3Y8 114 aa5.36□□□□□ -1.55
CTNND1-236ENST00000533667 SPRY2O43597 315 aa5.36□□□□□ -1.55
CTNND1-236ENST00000533667 HHLA3Q9XRX5 114 aa5.36□□□□□ -1.55
CTNND1-236ENST00000533667 A6NDX4 124 aa5.36□□□□□ -1.55
CTNND1-236ENST00000533667 E7EUB6 86 aa5.36□□□□□ -1.55
CTNND1-236ENST00000533667 NDUFB1O75438 58 aa5.36□□□□□ -1.55
CTNND1-236ENST00000533667 INSL3P51460 131 aa5.36□□□□□ -1.55
CTNND1-236ENST00000533667 TMEM263Q8WUH6 116 aaKnown RBP5.36□□□□□ -1.55
CTNND1-236ENST00000533667 NBASA2RRP1 2371 aa5.35□□□□□ -1.55
CTNND1-236ENST00000533667 MED13Q9UHV7 2174 aa5.35□□□□□ -1.55
CTNND1-236ENST00000533667 ZFP36P26651 326 aaKnown RBP5.35□□□□□ -1.55
CTNND1-236ENST00000533667 PLA2G5P39877 138 aa5.35□□□□□ -1.55
CTNND1-236ENST00000533667 MP68P56378 58 aa5.35□□□□□ -1.55
CTNND1-236ENST00000533667 NOTCH3Q9UM47 2321 aa5.35□□□□□ -1.55
CTNND1-236ENST00000533667 ODF3BA8MYP8 253 aa5.35□□□□□ -1.55
CTNND1-236ENST00000533667 TMEM256-PLSCR3K7ERE1 68 aa5.35□□□□□ -1.55
CTNND1-236ENST00000533667 TIMM17BO60830 172 aa5.35□□□□□ -1.55
CTNND1-236ENST00000533667 RPL18AQ02543 176 aaKnown RBP5.35□□□□□ -1.55
CTNND1-236ENST00000533667 NREPQ16612 68 aa5.35□□□□□ -1.55
CTNND1-236ENST00000533667 ATP5EP2Q5VTU8 51 aa5.35□□□□□ -1.55
CTNND1-236ENST00000533667 TIRAPP58753 221 aa5.35□□□□□ -1.55
CTNND1-236ENST00000533667 IGLV2-8P01709 118 aa5.35□□□□□ -1.55
CTNND1-236ENST00000533667 COL4A3Q01955 1670 aa5.35□□□□□ -1.55
CTNND1-236ENST00000533667 PCNX1Q96RV3 2341 aa5.34□□□□□ -1.55
CTNND1-236ENST00000533667 DEFB105AQ8NG35 78 aa5.34□□□□□ -1.55
CTNND1-236ENST00000533667 TM2D2Q9BX73 214 aa5.34□□□□□ -1.55
CTNND1-236ENST00000533667 TNFRSF13BO14836 293 aaPredicted RBP5.34□□□□□ -1.55
CTNND1-236ENST00000533667 XGP55808 180 aa5.34□□□□□ -1.55
CTNND1-236ENST00000533667 MIAQ16674 131 aa5.34□□□□□ -1.55
CTNND1-236ENST00000533667 NDUFA11Q86Y39 141 aa5.34□□□□□ -1.55
CTNND1-236ENST00000533667 DIRC1Q969H9 104 aa5.34□□□□□ -1.55
CTNND1-236ENST00000533667 LECT2O14960 151 aa5.34□□□□□ -1.56
CTNND1-236ENST00000533667 IGHV3-30-3P0DP02 117 aa5.34□□□□□ -1.56
CTNND1-236ENST00000533667 Q9HAA7 133 aa5.34□□□□□ -1.56
CTNND1-236ENST00000533667 CHD3Q12873 2000 aaKnown RBP5.33□□□□□ -1.56
CTNND1-236ENST00000533667 ZGRF1Q86YA3 2104 aa5.33□□□□□ -1.56
CTNND1-236ENST00000533667 H7C423 109 aa5.33□□□□□ -1.56
CTNND1-236ENST00000533667 NDUFS5O43920 106 aa5.33□□□□□ -1.56
CTNND1-236ENST00000533667 MSMPQ1L6U9 139 aa5.33□□□□□ -1.56
CTNND1-236ENST00000533667 TMEM61Q8N0U2 210 aa5.33□□□□□ -1.56
CTNND1-236ENST00000533667 MPLKIPQ8TAP9 179 aa5.33□□□□□ -1.56
CTNND1-236ENST00000533667 PRO0255Q9UI72 69 aa5.33□□□□□ -1.56
CTNND1-236ENST00000533667 SPAG11BQ08648 103 aa5.33□□□□□ -1.56
CTNND1-236ENST00000533667 EIF4EBP1Q13541 118 aaPredicted RBP5.33□□□□□ -1.56
CTNND1-236ENST00000533667 MBD6Q96DN6 1003 aa5.33□□□□□ -1.56
CTNND1-236ENST00000533667 TTTY13Q9BZ97 58 aa5.33□□□□□ -1.56
CTNND1-236ENST00000533667 IGF1P05019 195 aa5.33□□□□□ -1.56
CTNND1-236ENST00000533667 DENND4AQ7Z401 1863 aa5.33□□□□□ -1.56
CTNND1-236ENST00000533667 IGLV10-54A0A075B6I4 117 aa5.33□□□□□ -1.56
CTNND1-236ENST00000533667 CLPSL1A2RUU4 121 aa5.33□□□□□ -1.56
CTNND1-236ENST00000533667 UFSP1Q6NVU6 142 aa5.33□□□□□ -1.56
CTNND1-236ENST00000533667 MIR7-3HGQ8N6C7 128 aa5.33□□□□□ -1.56
CTNND1-236ENST00000533667 PCNX2A6NKB5 2137 aa5.32□□□□□ -1.56
CTNND1-236ENST00000533667 UNQ9165/PRO28630Q6UXU0 137 aa5.32□□□□□ -1.56
CTNND1-236ENST00000533667 C20orf197Q8N268 126 aa5.32□□□□□ -1.56
CTNND1-236ENST00000533667 CCDC140Q96MF4 163 aa5.32□□□□□ -1.56
CTNND1-236ENST00000533667 ZNF106Q9H2Y7 1883 aaKnown RBP5.32□□□□□ -1.56
CTNND1-236ENST00000533667 A0A1W2PNU3 283 aaPredicted RBP5.32□□□□□ -1.56
CTNND1-236ENST00000533667 PROP1O75360 226 aa5.32□□□□□ -1.56
CTNND1-236ENST00000533667 IGHV3-30P01768 117 aa5.32□□□□□ -1.56
CTNND1-236ENST00000533667 IGHV3-33P01772 117 aa5.32□□□□□ -1.56
CTNND1-236ENST00000533667 FRMD6-AS1P0C7T7 363 aa5.32□□□□□ -1.56
CTNND1-236ENST00000533667 IGHV3-30-5P0DP03 117 aa5.32□□□□□ -1.56
CTNND1-236ENST00000533667 BRWD1-AS2P59051 145 aa5.32□□□□□ -1.56
CTNND1-236ENST00000533667 NACAE9PAV3 2078 aa5.32□□□□□ -1.56
CTNND1-236ENST00000533667 IGKV3D-7A0A0C4DH55 119 aa5.32□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms