RNA–Protein interactions for RNA: ENST00000532600.1

SSH3-209, Transcript of slingshot protein phosphatase 3, humanhuman

TSL 4

Gene SSH3, Length 555 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH3-209ENST00000532600 FOXA3P55318 350 aaPredicted RBP12.72□□□□□ -0.37
SSH3-209ENST00000532600 CACNG7P62955 275 aa12.72□□□□□ -0.37
SSH3-209ENST00000532600 LINC01556Q5JQF7 62 aa12.72□□□□□ -0.37
SSH3-209ENST00000532600 FAM74A4Q5TZK3 123 aa12.72□□□□□ -0.37
SSH3-209ENST00000532600 C14orf178Q8N769 122 aaPredicted RBP12.72□□□□□ -0.37
SSH3-209ENST00000532600 PRADC1Q9BSG0 188 aa12.72□□□□□ -0.37
SSH3-209ENST00000532600 PGPEP1Q9NXJ5 209 aa12.72□□□□□ -0.37
SSH3-209ENST00000532600 HIGD1CA8MV81 97 aa12.71□□□□□ -0.37
SSH3-209ENST00000532600 NTF3P20783 257 aa12.71□□□□□ -0.37
SSH3-209ENST00000532600 WDR73Q6P4I2 378 aa12.71□□□□□ -0.37
SSH3-209ENST00000532600 F8W036 122 aa12.7□□□□□ -0.38
SSH3-209ENST00000532600 RHODO00212 210 aa12.7□□□□□ -0.38
SSH3-209ENST00000532600 Q8N3U1 123 aa12.7□□□□□ -0.38
SSH3-209ENST00000532600 C10orf126Q8N4M7 172 aa12.7□□□□□ -0.38
SSH3-209ENST00000532600 GFRA4Q9GZZ7 299 aa12.7□□□□□ -0.38
SSH3-209ENST00000532600 IBA57-AS1B1ANH7 110 aa12.69□□□□□ -0.38
SSH3-209ENST00000532600 KRTAP10-1P60331 282 aa12.69□□□□□ -0.38
SSH3-209ENST00000532600 PNRC1Q12796 327 aaPredicted RBP12.69□□□□□ -0.38
SSH3-209ENST00000532600 NUP35Q8NFH5 326 aa12.69□□□□□ -0.38
SSH3-209ENST00000532600 ATP6V0E2Q8NHE4 81 aa12.69□□□□□ -0.38
SSH3-209ENST00000532600 AP1S3Q96PC3 154 aa12.69□□□□□ -0.38
SSH3-209ENST00000532600 GTSF1LQ9H1H1 148 aa12.69□□□□□ -0.38
SSH3-209ENST00000532600 SMIM27A0A1W2PRY6 76 aa12.68□□□□□ -0.38
SSH3-209ENST00000532600 LRCOL1A6NCL2 159 aa12.68□□□□□ -0.38
SSH3-209ENST00000532600 FAM231BA6NCW3 169 aa12.68□□□□□ -0.38
SSH3-209ENST00000532600 EREGO14944 169 aa12.68□□□□□ -0.38
SSH3-209ENST00000532600 XGP55808 180 aa12.68□□□□□ -0.38
SSH3-209ENST00000532600 TWIST1Q15672 202 aa12.68□□□□□ -0.38
SSH3-209ENST00000532600 OR10J3Q5JRS4 329 aa12.68□□□□□ -0.38
SSH3-209ENST00000532600 C10orf91Q5T1B1 145 aa12.68□□□□□ -0.38
SSH3-209ENST00000532600 LELP1Q5T871 98 aa12.68□□□□□ -0.38
SSH3-209ENST00000532600 CDPF1Q6NVV7 123 aa12.68□□□□□ -0.38
SSH3-209ENST00000532600 SEC11CQ9BY50 192 aa12.68□□□□□ -0.38
SSH3-209ENST00000532600 TRAV8-6A0A0B4J262 113 aa12.67□□□□□ -0.38
SSH3-209ENST00000532600 GAGE12JA6NER3 117 aa12.67□□□□□ -0.38
SSH3-209ENST00000532600 IGHV3-30P01768 117 aa12.67□□□□□ -0.38
SSH3-209ENST00000532600 IGHV3-33P01772 117 aa12.67□□□□□ -0.38
SSH3-209ENST00000532600 IGHV3-30-3P0DP02 117 aa12.67□□□□□ -0.38
SSH3-209ENST00000532600 IGHV3-30-5P0DP03 117 aa12.67□□□□□ -0.38
SSH3-209ENST00000532600 GAGE1Q13065 139 aa12.67□□□□□ -0.38
SSH3-209ENST00000532600 GAGE4Q13068 117 aa12.67□□□□□ -0.38
SSH3-209ENST00000532600 GAGE5Q13069 117 aa12.67□□□□□ -0.38
SSH3-209ENST00000532600 GAGE13Q4V321 117 aa12.67□□□□□ -0.38
SSH3-209ENST00000532600 FAT1Q14517 4588 aa12.67□□□□□ -0.38
SSH3-209ENST00000532600 RAB4BP61018 213 aa12.65□□□□□ -0.38
SSH3-209ENST00000532600 ZNF56Q15929 161 aa12.65□□□□□ -0.38
SSH3-209ENST00000532600 CARHSP1Q9Y2V2 147 aaKnown RBP12.65□□□□□ -0.38
SSH3-209ENST00000532600 A0A1B0GUT8 65 aa12.64□□□□□ -0.39
SSH3-209ENST00000532600 NAT8BQ9UHF3 227 aa12.64□□□□□ -0.39
SSH3-209ENST00000532600 MGPP08493 103 aa12.63□□□□□ -0.39
SSH3-209ENST00000532600 TRGC1P0CF51 173 aa12.63□□□□□ -0.39
SSH3-209ENST00000532600 SMIM17P0DL12 118 aa12.63□□□□□ -0.39
SSH3-209ENST00000532600 Q9HAA7 133 aa12.63□□□□□ -0.39
SSH3-209ENST00000532600 PPP1R2P9O14990 202 aa12.62□□□□□ -0.39
SSH3-209ENST00000532600 MT-ND4LP03901 98 aa12.62□□□□□ -0.39
SSH3-209ENST00000532600 SUMO4Q6EEV6 95 aa12.62□□□□□ -0.39
SSH3-209ENST00000532600 SLC7A5P1Q8MH63 180 aa12.62□□□□□ -0.39
SSH3-209ENST00000532600 DPH3P1Q9H4G8 78 aa12.62□□□□□ -0.39
SSH3-209ENST00000532600 F5H697 171 aa12.61□□□□□ -0.39
SSH3-209ENST00000532600 M0QY20 66 aa12.61□□□□□ -0.39
SSH3-209ENST00000532600 NEXN-AS1Q8NBZ9 246 aa12.61□□□□□ -0.39
SSH3-209ENST00000532600 ANAPC16Q96DE5 110 aa12.61□□□□□ -0.39
SSH3-209ENST00000532600 DNAH8Q96JB1 4490 aa12.61□□□□□ -0.39
SSH3-209ENST00000532600 WFDC2Q14508 124 aa12.6□□□□□ -0.39
SSH3-209ENST00000532600 BORCS7Q96B45 105 aa12.6□□□□□ -0.39
SSH3-209ENST00000532600 TRAV26-2A0A0B4J265 109 aa12.59□□□□□ -0.39
SSH3-209ENST00000532600 TRBV10-1A0A0K0K1A3 114 aa12.59□□□□□ -0.39
SSH3-209ENST00000532600 GCSHP23434 173 aa12.59□□□□□ -0.39
SSH3-209ENST00000532600 RIGQ13278 110 aa12.59□□□□□ -0.39
SSH3-209ENST00000532600 LAGE3Q14657 143 aa12.59□□□□□ -0.39
SSH3-209ENST00000532600 DAZ4Q86SG3 579 aaKnown RBP12.59□□□□□ -0.39
SSH3-209ENST00000532600 Q8N814 137 aa12.59□□□□□ -0.39
SSH3-209ENST00000532600 RNF185Q96GF1 192 aa12.59□□□□□ -0.39
SSH3-209ENST00000532600 DAZ3Q9NR90 486 aaKnown RBP12.59□□□□□ -0.39
SSH3-209ENST00000532600 A0A1B0GXF2 115 aa12.58□□□□□ -0.4
SSH3-209ENST00000532600 PSCAO43653 123 aa12.58□□□□□ -0.4
SSH3-209ENST00000532600 MRPL54Q6P161 138 aaKnown RBP12.58□□□□□ -0.4
SSH3-209ENST00000532600 TMEM191AQ9H0A3 160 aa12.58□□□□□ -0.4
SSH3-209ENST00000532600 VPS13BQ7Z7G8 4022 aa12.58□□□□□ -0.4
SSH3-209ENST00000532600 GAS8-AS1O95177 125 aa12.57□□□□□ -0.4
SSH3-209ENST00000532600 UBE2D3P61077 147 aa12.57□□□□□ -0.4
SSH3-209ENST00000532600 UBE2D2P62837 147 aa12.57□□□□□ -0.4
SSH3-209ENST00000532600 GATD1Q8NB37 220 aa12.57□□□□□ -0.4
SSH3-209ENST00000532600 CLRN3Q8NCR9 226 aa12.57□□□□□ -0.4
SSH3-209ENST00000532600 DNAJC30Q96LL9 226 aa12.57□□□□□ -0.4
SSH3-209ENST00000532600 TRBV7-3A0A075B6L6 115 aa12.56□□□□□ -0.4
SSH3-209ENST00000532600 C7orf77A4D0Y5 90 aa12.56□□□□□ -0.4
SSH3-209ENST00000532600 HAMPP81172 84 aa12.56□□□□□ -0.4
SSH3-209ENST00000532600 AMN1Q8IY45 258 aa12.56□□□□□ -0.4
SSH3-209ENST00000532600 IGLV5-52A0A0A0MRZ9 124 aa12.55□□□□□ -0.4
SSH3-209ENST00000532600 EPM2AB3EWF7 344 aa12.55□□□□□ -0.4
SSH3-209ENST00000532600 CAMPP49913 170 aa12.55□□□□□ -0.4
SSH3-209ENST00000532600 RPL36AP83881 106 aaKnown RBP12.55□□□□□ -0.4
SSH3-209ENST00000532600 SMIM15Q7Z3B0 74 aa12.55□□□□□ -0.4
SSH3-209ENST00000532600 NTN5Q8WTR8 489 aaPredicted RBP12.55□□□□□ -0.4
SSH3-209ENST00000532600 RPL36ALQ969Q0 106 aaKnown RBP12.55□□□□□ -0.4
SSH3-209ENST00000532600 CTDSP1Q9GZU7 261 aa12.55□□□□□ -0.4
SSH3-209ENST00000532600 A0A087WWC5 75 aa12.54□□□□□ -0.4
SSH3-209ENST00000532600 APOC3P02656 99 aa12.54□□□□□ -0.4
SSH3-209ENST00000532600 RAB4AP20338 218 aa12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 107.9 ms