RNA–Protein interactions for RNA: ENST00000531050.5

PTPRK-219, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 1 (best)

Gene PTPRK, Length 2,515 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-219ENST00000531050 NBL1P41271 181 aa5.77□□□□□ -1.49
PTPRK-219ENST00000531050 CIRBPQ14011 172 aaKnown RBP5.77□□□□□ -1.49
PTPRK-219ENST00000531050 IL17DQ8TAD2 202 aa5.77□□□□□ -1.49
PTPRK-219ENST00000531050 BRK1Q8WUW1 75 aa5.77□□□□□ -1.49
PTPRK-219ENST00000531050 SPRY3O43610 288 aa5.77□□□□□ -1.49
PTPRK-219ENST00000531050 POLR2KP53803 58 aaKnown RBP5.77□□□□□ -1.49
PTPRK-219ENST00000531050 Q8N2B8 174 aa5.77□□□□□ -1.49
PTPRK-219ENST00000531050 DKK4Q9UBT3 224 aa5.77□□□□□ -1.49
PTPRK-219ENST00000531050 A0A0J9YXV3 536 aa5.76□□□□□ -1.49
PTPRK-219ENST00000531050 F8W735 103 aaPredicted RBP5.76□□□□□ -1.49
PTPRK-219ENST00000531050 NXPH4O95158 308 aa5.76□□□□□ -1.49
PTPRK-219ENST00000531050 PPP1R17O96001 155 aa5.76□□□□□ -1.49
PTPRK-219ENST00000531050 LYPD5Q6UWN5 251 aa5.76□□□□□ -1.49
PTPRK-219ENST00000531050 C9orf47Q6ZRZ4 202 aa5.76□□□□□ -1.49
PTPRK-219ENST00000531050 LINC00846Q9NV44 126 aa5.76□□□□□ -1.49
PTPRK-219ENST00000531050 RAI1Q7Z5J4 1906 aaPredicted RBP5.76□□□□□ -1.49
PTPRK-219ENST00000531050 PRRC2AP48634 2157 aaKnown RBP5.76□□□□□ -1.49
PTPRK-219ENST00000531050 H7BZZ5 65 aa5.76□□□□□ -1.49
PTPRK-219ENST00000531050 IGHV1-69P01742 117 aa5.76□□□□□ -1.49
PTPRK-219ENST00000531050 XCL1P47992 114 aa5.76□□□□□ -1.49
PTPRK-219ENST00000531050 PRR9Q5T870 116 aa5.76□□□□□ -1.49
PTPRK-219ENST00000531050 C20orf197Q8N268 126 aa5.76□□□□□ -1.49
PTPRK-219ENST00000531050 SIRPDQ9H106 197 aa5.76□□□□□ -1.49
PTPRK-219ENST00000531050 XCL2Q9UBD3 114 aa5.76□□□□□ -1.49
PTPRK-219ENST00000531050 LINC00315P59091 139 aa5.75□□□□□ -1.49
PTPRK-219ENST00000531050 WDFY4Q6ZS81 3184 aa5.75□□□□□ -1.49
PTPRK-219ENST00000531050 IGHV4OR15-8A0A075B7B6 117 aa5.75□□□□□ -1.49
PTPRK-219ENST00000531050 A0A087WW49 117 aa5.75□□□□□ -1.49
PTPRK-219ENST00000531050 IGHV1-18A0A0C4DH31 117 aa5.75□□□□□ -1.49
PTPRK-219ENST00000531050 GHRHP01286 108 aa5.75□□□□□ -1.49
PTPRK-219ENST00000531050 IGHG2P01859 326 aa5.75□□□□□ -1.49
PTPRK-219ENST00000531050 HILS1P60008 231 aa5.75□□□□□ -1.49
PTPRK-219ENST00000531050 FAM218AQ96MZ4 157 aa5.75□□□□□ -1.49
PTPRK-219ENST00000531050 LINC00474Q9P2X8 69 aa5.75□□□□□ -1.49
PTPRK-219ENST00000531050 NACAE9PAV3 2078 aa5.74□□□□□ -1.49
PTPRK-219ENST00000531050 CUL9Q8IWT3 2517 aa5.74□□□□□ -1.49
PTPRK-219ENST00000531050 GPR179Q6PRD1 2367 aa5.74□□□□□ -1.49
PTPRK-219ENST00000531050 VCYO14598 125 aa5.74□□□□□ -1.49
PTPRK-219ENST00000531050 IGLV1-44P01699 117 aa5.74□□□□□ -1.49
PTPRK-219ENST00000531050 RPL28P46779 137 aaKnown RBP5.74□□□□□ -1.49
PTPRK-219ENST00000531050 FAM19A1Q7Z5A9 133 aa5.74□□□□□ -1.49
PTPRK-219ENST00000531050 C20orf173Q96LM9 149 aa5.74□□□□□ -1.49
PTPRK-219ENST00000531050 NDUFA12Q9UI09 145 aa5.74□□□□□ -1.49
PTPRK-219ENST00000531050 KIF25-AS1Q9Y6Z4 181 aa5.74□□□□□ -1.49
PTPRK-219ENST00000531050 A0A1W2PRX2 142 aa5.74□□□□□ -1.49
PTPRK-219ENST00000531050 RBMY1BA6NDE4 496 aaKnown RBP5.74□□□□□ -1.49
PTPRK-219ENST00000531050 RBMY1EA6NEQ0 496 aaKnown RBP5.74□□□□□ -1.49
PTPRK-219ENST00000531050 KNCNA6PVL3 124 aa5.74□□□□□ -1.49
PTPRK-219ENST00000531050 BUB1B-PAK6H3BSN5 160 aa5.74□□□□□ -1.49
PTPRK-219ENST00000531050 DNAL4O96015 105 aa5.74□□□□□ -1.49
PTPRK-219ENST00000531050 RBMY1DP0C7P1 496 aaKnown RBP5.74□□□□□ -1.49
PTPRK-219ENST00000531050 RBMY1A1P0DJD3 496 aaKnown RBP5.74□□□□□ -1.49
PTPRK-219ENST00000531050 RBMY1CP0DJD4 496 aa5.74□□□□□ -1.49
PTPRK-219ENST00000531050 RBMY1FQ15415 496 aaKnown RBP5.74□□□□□ -1.49
PTPRK-219ENST00000531050 C9orf129Q5T035 196 aaKnown RBP5.74□□□□□ -1.49
PTPRK-219ENST00000531050 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa5.74□□□□□ -1.49
PTPRK-219ENST00000531050 NUP37Q8NFH4 326 aa5.73□□□□□ -1.49
PTPRK-219ENST00000531050 MALRD1Q5VYJ5 2156 aa5.73□□□□□ -1.49
PTPRK-219ENST00000531050 CELSR3Q9NYQ7 3312 aa5.73□□□□□ -1.49
PTPRK-219ENST00000531050 IGHV3OR16-8A0A075B7F1 116 aa5.73□□□□□ -1.49
PTPRK-219ENST00000531050 TRBV12-3P01733 135 aa5.73□□□□□ -1.49
PTPRK-219ENST00000531050 IGF1P05019 195 aa5.73□□□□□ -1.49
PTPRK-219ENST00000531050 C6orf226Q5I0X4 101 aa5.73□□□□□ -1.49
PTPRK-219ENST00000531050 FANCD2OSQ96PS1 177 aa5.73□□□□□ -1.49
PTPRK-219ENST00000531050 PHLDA3Q9Y5J5 127 aa5.73□□□□□ -1.49
PTPRK-219ENST00000531050 A8MZ25 164 aa5.72□□□□□ -1.49
PTPRK-219ENST00000531050 MRPS36P82909 103 aaKnown RBP5.72□□□□□ -1.49
PTPRK-219ENST00000531050 SUMO4Q6EEV6 95 aa5.72□□□□□ -1.49
PTPRK-219ENST00000531050 IGHV1-58A0A0C4DH39 117 aa5.72□□□□□ -1.49
PTPRK-219ENST00000531050 TRBV27A0A0K0K1C4 114 aa5.72□□□□□ -1.49
PTPRK-219ENST00000531050 TIMM17BO60830 172 aa5.72□□□□□ -1.49
PTPRK-219ENST00000531050 IGHV3-23P01764 117 aa5.72□□□□□ -1.49
PTPRK-219ENST00000531050 NDPQ00604 133 aa5.72□□□□□ -1.49
PTPRK-219ENST00000531050 CNEP1R1Q8N9A8 125 aa5.72□□□□□ -1.49
PTPRK-219ENST00000531050 Q9HAA7 133 aa5.72□□□□□ -1.49
PTPRK-219ENST00000531050 C14orf132Q9NPU4 83 aa5.72□□□□□ -1.49
PTPRK-219ENST00000531050 IGLV4-3A0A075B6K6 122 aa5.71□□□□□ -1.5
PTPRK-219ENST00000531050 TRAV23DV6A0A075B6W5 121 aa5.71□□□□□ -1.5
PTPRK-219ENST00000531050 S100A4P26447 101 aaKnown RBP5.71□□□□□ -1.5
PTPRK-219ENST00000531050 SS18Q15532 418 aa5.71□□□□□ -1.5
PTPRK-219ENST00000531050 C9orf106Q8NAJ2 232 aa5.71□□□□□ -1.5
PTPRK-219ENST00000531050 MGAQ8IWI9 3026 aa5.71□□□□□ -1.5
PTPRK-219ENST00000531050 IGLV11-55A0A075B6I3 123 aa5.71□□□□□ -1.5
PTPRK-219ENST00000531050 CLPSL1A2RUU4 121 aa5.71□□□□□ -1.5
PTPRK-219ENST00000531050 PRSS33Q8NF86 280 aa5.71□□□□□ -1.5
PTPRK-219ENST00000531050 FDCSPQ8NFU4 85 aa5.71□□□□□ -1.5
PTPRK-219ENST00000531050 OBSCN-AS1Q96MR7 158 aa5.71□□□□□ -1.5
PTPRK-219ENST00000531050 IGHV1-3A0A0C4DH29 117 aa5.7□□□□□ -1.5
PTPRK-219ENST00000531050 A0A0U1RRA0 63 aa5.7□□□□□ -1.5
PTPRK-219ENST00000531050 CTSGP08311 255 aa5.7□□□□□ -1.5
PTPRK-219ENST00000531050 VMO1Q7Z5L0 202 aa5.7□□□□□ -1.5
PTPRK-219ENST00000531050 VSIG2Q96IQ7 327 aa5.7□□□□□ -1.5
PTPRK-219ENST00000531050 CADP27708 2225 aa5.7□□□□□ -1.5
PTPRK-219ENST00000531050 DSPP15924 2871 aaKnown RBP5.7□□□□□ -1.5
PTPRK-219ENST00000531050 TRBV7-6A0A0J9YX20 115 aa5.7□□□□□ -1.5
PTPRK-219ENST00000531050 CCL21O00585 134 aa5.7□□□□□ -1.5
PTPRK-219ENST00000531050 ZZEF1O43149 2961 aa5.7□□□□□ -1.5
PTPRK-219ENST00000531050 IGHV1-46P01743 117 aa5.7□□□□□ -1.5
PTPRK-219ENST00000531050 CCKP06307 115 aa5.7□□□□□ -1.5
PTPRK-219ENST00000531050 MED14OSP0DP75 135 aa5.7□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 181.7 ms