RNA–Protein interactions for RNA: ENST00000530927.5

GMDS-208, Transcript of GDP-mannose 4,6-dehydratase, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GMDS, Length 1,440 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GMDS-208ENST00000530927 OR5AL1P0C617 328 aa12.74□□□□□ -0.37
GMDS-208ENST00000530927 TTC32Q5I0X7 151 aa12.74□□□□□ -0.37
GMDS-208ENST00000530927 FER1L6-AS1Q8NA97 138 aa12.74□□□□□ -0.37
GMDS-208ENST00000530927 LINC00694P0DN24 101 aa12.73□□□□□ -0.37
GMDS-208ENST00000530927 FOXA3P55318 350 aaPredicted RBP12.73□□□□□ -0.37
GMDS-208ENST00000530927 LINC00315P59091 139 aa12.73□□□□□ -0.37
GMDS-208ENST00000530927 GTSF1Q8WW33 167 aa12.73□□□□□ -0.37
GMDS-208ENST00000530927 TPPP3Q9BW30 176 aa12.73□□□□□ -0.37
GMDS-208ENST00000530927 RHODO00212 210 aa12.71□□□□□ -0.37
GMDS-208ENST00000530927 ATP6V0E2Q8NHE4 81 aa12.71□□□□□ -0.37
GMDS-208ENST00000530927 SMIM27A0A1W2PRY6 76 aa12.71□□□□□ -0.38
GMDS-208ENST00000530927 CTRLP40313 264 aa12.71□□□□□ -0.38
GMDS-208ENST00000530927 SPANXN1Q5VSR9 72 aa12.71□□□□□ -0.38
GMDS-208ENST00000530927 LYZL1Q6UWQ5 148 aa12.71□□□□□ -0.38
GMDS-208ENST00000530927 MSRB1Q9NZV6 116 aa12.71□□□□□ -0.38
GMDS-208ENST00000530927 NAT8BQ9UHF3 227 aa12.71□□□□□ -0.38
GMDS-208ENST00000530927 HIGD1CA8MV81 97 aa12.7□□□□□ -0.38
GMDS-208ENST00000530927 CACNG7P62955 275 aa12.7□□□□□ -0.38
GMDS-208ENST00000530927 WDR73Q6P4I2 378 aa12.7□□□□□ -0.38
GMDS-208ENST00000530927 SH2D6Q7Z4S9 175 aa12.7□□□□□ -0.38
GMDS-208ENST00000530927 Q8N3U1 123 aa12.7□□□□□ -0.38
GMDS-208ENST00000530927 Q6ZRN7 208 aaPredicted RBP12.69□□□□□ -0.38
GMDS-208ENST00000530927 BORCS7Q96B45 105 aa12.69□□□□□ -0.38
GMDS-208ENST00000530927 PGLYRP4Q96LB8 373 aa12.69□□□□□ -0.38
GMDS-208ENST00000530927 IMMP2LQ96T52 175 aa12.69□□□□□ -0.38
GMDS-208ENST00000530927 GTSF1LQ9H1H1 148 aa12.69□□□□□ -0.38
GMDS-208ENST00000530927 C5orf52A6NGY3 159 aa12.68□□□□□ -0.38
GMDS-208ENST00000530927 S100A6P06703 90 aa12.68□□□□□ -0.38
GMDS-208ENST00000530927 DNAH10OSP0CZ25 163 aa12.68□□□□□ -0.38
GMDS-208ENST00000530927 TIRAPP58753 221 aa12.68□□□□□ -0.38
GMDS-208ENST00000530927 ELOBQ15370 118 aa12.68□□□□□ -0.38
GMDS-208ENST00000530927 ZNF56Q15929 161 aa12.68□□□□□ -0.38
GMDS-208ENST00000530927 OR10J3Q5JRS4 329 aa12.68□□□□□ -0.38
GMDS-208ENST00000530927 LINC00518Q8N0U6 118 aa12.68□□□□□ -0.38
GMDS-208ENST00000530927 NUP35Q8NFH5 326 aa12.68□□□□□ -0.38
GMDS-208ENST00000530927 CNFNQ9BYD5 112 aa12.68□□□□□ -0.38
GMDS-208ENST00000530927 TRBV24-1A0A075B6N3 115 aa12.67□□□□□ -0.38
GMDS-208ENST00000530927 S100A8P05109 93 aa12.67□□□□□ -0.38
GMDS-208ENST00000530927 KIF25-AS1Q9Y6Z4 181 aa12.67□□□□□ -0.38
GMDS-208ENST00000530927 IGHV3-38A0A0C4DH36 116 aa12.66□□□□□ -0.38
GMDS-208ENST00000530927 LELP1Q5T871 98 aa12.66□□□□□ -0.38
GMDS-208ENST00000530927 BTF3L4Q96K17 158 aa12.66□□□□□ -0.38
GMDS-208ENST00000530927 A0A1B0GUT8 65 aa12.65□□□□□ -0.38
GMDS-208ENST00000530927 IGHV3-30P01768 117 aa12.65□□□□□ -0.38
GMDS-208ENST00000530927 IGHV3-33P01772 117 aa12.65□□□□□ -0.38
GMDS-208ENST00000530927 IGHV3-30-3P0DP02 117 aa12.65□□□□□ -0.38
GMDS-208ENST00000530927 IGHV3-30-5P0DP03 117 aa12.65□□□□□ -0.38
GMDS-208ENST00000530927 NTF3P20783 257 aa12.65□□□□□ -0.38
GMDS-208ENST00000530927 EVI2AP22794 236 aa12.64□□□□□ -0.39
GMDS-208ENST00000530927 RAB4BP61018 213 aa12.64□□□□□ -0.39
GMDS-208ENST00000530927 TWIST1Q15672 202 aa12.64□□□□□ -0.39
GMDS-208ENST00000530927 KCNIP4Q6PIL6 250 aa12.64□□□□□ -0.39
GMDS-208ENST00000530927 TRAV8-6A0A0B4J262 113 aa12.63□□□□□ -0.39
GMDS-208ENST00000530927 F5H697 171 aa12.63□□□□□ -0.39
GMDS-208ENST00000530927 S100PP25815 95 aa12.63□□□□□ -0.39
GMDS-208ENST00000530927 RIGQ13278 110 aa12.63□□□□□ -0.39
GMDS-208ENST00000530927 NEXN-AS1Q8NBZ9 246 aa12.63□□□□□ -0.39
GMDS-208ENST00000530927 AP1S3Q96PC3 154 aa12.63□□□□□ -0.39
GMDS-208ENST00000530927 MGPP08493 103 aa12.62□□□□□ -0.39
GMDS-208ENST00000530927 LINC01556Q5JQF7 62 aa12.62□□□□□ -0.39
GMDS-208ENST00000530927 TRGC1P0CF51 173 aa12.62□□□□□ -0.39
GMDS-208ENST00000530927 FUSP35637 526 aaKnown RBP eCLIP12.62□□□□□ -0.393e-6■■■□□ 19.1
GMDS-208ENST00000530927 RPS10P46783 165 aaKnown RBP12.62□□□□□ -0.39
GMDS-208ENST00000530927 UBE2D3P61077 147 aa12.62□□□□□ -0.39
GMDS-208ENST00000530927 UBE2D2P62837 147 aa12.62□□□□□ -0.39
GMDS-208ENST00000530927 TRAV9-1A0A075B6T8 112 aa12.61□□□□□ -0.39
GMDS-208ENST00000530927 TRAV9-2A0A087WT02 112 aa12.61□□□□□ -0.39
GMDS-208ENST00000530927 A0A1B0GW15 77 aa12.61□□□□□ -0.39
GMDS-208ENST00000530927 SNRPEP62304 92 aaKnown RBP12.61□□□□□ -0.39
GMDS-208ENST00000530927 RPL36AP83881 106 aaKnown RBP12.61□□□□□ -0.39
GMDS-208ENST00000530927 SMIM15Q7Z3B0 74 aa12.61□□□□□ -0.39
GMDS-208ENST00000530927 RPL36ALQ969Q0 106 aaKnown RBP12.61□□□□□ -0.39
GMDS-208ENST00000530927 DNAH5Q8TE73 4624 aa12.6□□□□□ -0.39
GMDS-208ENST00000530927 KIAA1109Q2LD37 5005 aa12.6□□□□□ -0.39
GMDS-208ENST00000530927 TRBV7-3A0A075B6L6 115 aa12.6□□□□□ -0.39
GMDS-208ENST00000530927 TRBV10-1A0A0K0K1A3 114 aa12.6□□□□□ -0.39
GMDS-208ENST00000530927 SMIM6P0DI80 62 aa12.6□□□□□ -0.39
GMDS-208ENST00000530927 SMIM17P0DL12 118 aa12.6□□□□□ -0.39
GMDS-208ENST00000530927 KRTAP10-2P60368 255 aa12.6□□□□□ -0.39
GMDS-208ENST00000530927 ATP5L2Q7Z4Y8 100 aa12.6□□□□□ -0.39
GMDS-208ENST00000530927 LRP1BQ9NZR2 4599 aa12.59□□□□□ -0.39
GMDS-208ENST00000530927 AKR1D1P51857 326 aa12.59□□□□□ -0.39
GMDS-208ENST00000530927 SUMO4Q6EEV6 95 aa12.59□□□□□ -0.39
GMDS-208ENST00000530927 MRPL54Q6P161 138 aaKnown RBP12.59□□□□□ -0.39
GMDS-208ENST00000530927 Q9HAA7 133 aa12.59□□□□□ -0.39
GMDS-208ENST00000530927 URGCP-MRPS24S4R325 110 aa12.59□□□□□ -0.39
GMDS-208ENST00000530927 BTF3P20290 206 aaKnown RBP12.58□□□□□ -0.4
GMDS-208ENST00000530927 SPATA12Q7Z6I5 190 aa12.58□□□□□ -0.4
GMDS-208ENST00000530927 DAZ4Q86SG3 579 aaKnown RBP12.58□□□□□ -0.4
GMDS-208ENST00000530927 DAZ3Q9NR90 486 aaKnown RBP12.58□□□□□ -0.4
GMDS-208ENST00000530927 HBBP68871 147 aa12.57□□□□□ -0.4
GMDS-208ENST00000530927 DPH3P1Q9H4G8 78 aa12.57□□□□□ -0.4
GMDS-208ENST00000530927 TGIF2-C20orf24A0A0A6YYL0 155 aa12.56□□□□□ -0.4
GMDS-208ENST00000530927 A0A1B0GXF2 115 aa12.56□□□□□ -0.4
GMDS-208ENST00000530927 IBA57-AS1B1ANH7 110 aa12.56□□□□□ -0.4
GMDS-208ENST00000530927 M0QY20 66 aa12.56□□□□□ -0.4
GMDS-208ENST00000530927 CAMPP49913 170 aa12.56□□□□□ -0.4
GMDS-208ENST00000530927 S100A12P80511 92 aa12.56□□□□□ -0.4
GMDS-208ENST00000530927 FABP9Q0Z7S8 132 aa12.56□□□□□ -0.4
GMDS-208ENST00000530927 C10orf126Q8N4M7 172 aa12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 135.1 ms