RNA–Protein interactions for RNA: ENST00000530748.5

CTNND1-227, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,925 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-227ENST00000530748 NDUFC2O95298 119 aa6.41□□□□□ -1.38
CTNND1-227ENST00000530748 ZNF80P51504 273 aaPredicted RBP6.41□□□□□ -1.38
CTNND1-227ENST00000530748 NOTCH4Q99466 2003 aa6.4□□□□□ -1.38
CTNND1-227ENST00000530748 A0A1B0GX51 115 aa6.4□□□□□ -1.38
CTNND1-227ENST00000530748 TDRG1Q3Y452 100 aa6.4□□□□□ -1.38
CTNND1-227ENST00000530748 SMIM20Q8N5G0 67 aa6.4□□□□□ -1.38
CTNND1-227ENST00000530748 WFDC9Q8NEX5 89 aa6.4□□□□□ -1.38
CTNND1-227ENST00000530748 SHISA2Q6UWI4 295 aa6.4□□□□□ -1.38
CTNND1-227ENST00000530748 LINC01548A6NM66 108 aa6.4□□□□□ -1.38
CTNND1-227ENST00000530748 LY6LH3BQJ8 138 aa6.4□□□□□ -1.38
CTNND1-227ENST00000530748 TAX1BP3O14907 124 aa6.4□□□□□ -1.39
CTNND1-227ENST00000530748 HIGD2BQ4VC39 106 aa6.4□□□□□ -1.39
CTNND1-227ENST00000530748 IGLV2-8P01709 118 aa6.4□□□□□ -1.39
CTNND1-227ENST00000530748 REG3AQ06141 175 aa6.4□□□□□ -1.39
CTNND1-227ENST00000530748 C7orf33Q8WU49 177 aa6.4□□□□□ -1.39
CTNND1-227ENST00000530748 H3BT86 120 aa6.39□□□□□ -1.39
CTNND1-227ENST00000530748 P0DMU3 169 aa6.39□□□□□ -1.39
CTNND1-227ENST00000530748 FAM231AP0DMU4 169 aa6.39□□□□□ -1.39
CTNND1-227ENST00000530748 FAM231CP0DMU5 169 aa6.39□□□□□ -1.39
CTNND1-227ENST00000530748 HILS1P60008 231 aa6.39□□□□□ -1.39
CTNND1-227ENST00000530748 TNRC6AQ8NDV7 1962 aaKnown RBP6.39□□□□□ -1.39
CTNND1-227ENST00000530748 UBE2D1P51668 147 aa6.39□□□□□ -1.39
CTNND1-227ENST00000530748 FOXI1Q12951 378 aa6.39□□□□□ -1.39
CTNND1-227ENST00000530748 C11orf71Q6IPW1 123 aa6.39□□□□□ -1.39
CTNND1-227ENST00000530748 C1orf229Q6ZS94 237 aaPredicted RBP6.39□□□□□ -1.39
CTNND1-227ENST00000530748 ZDBF2Q9HCK1 2354 aa6.39□□□□□ -1.39
CTNND1-227ENST00000530748 TRAV26-1A0A087WT03 109 aa6.39□□□□□ -1.39
CTNND1-227ENST00000530748 IGLC6P0CF74 106 aa6.39□□□□□ -1.39
CTNND1-227ENST00000530748 DEFB114Q30KQ6 69 aa6.39□□□□□ -1.39
CTNND1-227ENST00000530748 CEMP1Q6PRD7 247 aaPredicted RBP6.39□□□□□ -1.39
CTNND1-227ENST00000530748 HEATR5AQ86XA9 2040 aa6.39□□□□□ -1.39
CTNND1-227ENST00000530748 UFSP1Q6NVU6 142 aa6.39□□□□□ -1.39
CTNND1-227ENST00000530748 LRCOL1A6NCL2 159 aa6.38□□□□□ -1.39
CTNND1-227ENST00000530748 Q6ZTI0 123 aa6.38□□□□□ -1.39
CTNND1-227ENST00000530748 LINC00269Q8N2A0 174 aa6.38□□□□□ -1.39
CTNND1-227ENST00000530748 MUC22E2RYF6 1773 aaPredicted RBP6.38□□□□□ -1.39
CTNND1-227ENST00000530748 TRIOBPQ9H2D6 2365 aa6.38□□□□□ -1.39
CTNND1-227ENST00000530748 K7EQG2 157 aa6.38□□□□□ -1.39
CTNND1-227ENST00000530748 PDE6GP18545 87 aa6.38□□□□□ -1.39
CTNND1-227ENST00000530748 BRWD1-AS2P59051 145 aa6.38□□□□□ -1.39
CTNND1-227ENST00000530748 TTTY13Q9BZ97 58 aa6.38□□□□□ -1.39
CTNND1-227ENST00000530748 A0A0J9YXY3 114 aa6.38□□□□□ -1.39
CTNND1-227ENST00000530748 FRMD6-AS1P0C7T7 363 aa6.38□□□□□ -1.39
CTNND1-227ENST00000530748 NEXN-AS1Q8NBZ9 246 aa6.38□□□□□ -1.39
CTNND1-227ENST00000530748 SS18L2Q9UHA2 77 aa6.38□□□□□ -1.39
CTNND1-227ENST00000530748 EBI3Q14213 229 aa6.37□□□□□ -1.39
CTNND1-227ENST00000530748 FAM236AA0A1B0GUQ0 79 aa6.37□□□□□ -1.39
CTNND1-227ENST00000530748 FAM236BA0A1B0GV22 79 aa6.37□□□□□ -1.39
CTNND1-227ENST00000530748 TMEM223A0PJW6 202 aa6.37□□□□□ -1.39
CTNND1-227ENST00000530748 CRYGDP07320 174 aa6.37□□□□□ -1.39
CTNND1-227ENST00000530748 CRIP3Q6Q6R5 217 aa6.37□□□□□ -1.39
CTNND1-227ENST00000530748 LINC00467Q9BRT7 94 aa6.37□□□□□ -1.39
CTNND1-227ENST00000530748 ALPK2Q86TB3 2170 aa6.37□□□□□ -1.39
CTNND1-227ENST00000530748 Q6ZPA2 131 aa6.37□□□□□ -1.39
CTNND1-227ENST00000530748 C5orf47Q569G3 176 aa6.37□□□□□ -1.39
CTNND1-227ENST00000530748 LINC00322Q6ZN03 302 aaPredicted RBP6.37□□□□□ -1.39
CTNND1-227ENST00000530748 CHCHD10Q8WYQ3 142 aaPredicted RBP6.37□□□□□ -1.39
CTNND1-227ENST00000530748 SPATA25Q9BR10 227 aa6.37□□□□□ -1.39
CTNND1-227ENST00000530748 SVIPQ8NHG7 77 aa6.37□□□□□ -1.39
CTNND1-227ENST00000530748 RTTNQ86VV8 2226 aa6.36□□□□□ -1.39
CTNND1-227ENST00000530748 WFDC2Q14508 124 aa6.36□□□□□ -1.39
CTNND1-227ENST00000530748 FAM222AQ5U5X8 452 aa6.36□□□□□ -1.39
CTNND1-227ENST00000530748 CFAP126Q5VTH2 177 aa6.36□□□□□ -1.39
CTNND1-227ENST00000530748 SPATA12Q7Z6I5 190 aa6.36□□□□□ -1.39
CTNND1-227ENST00000530748 ZFAND3Q9H8U3 227 aa6.36□□□□□ -1.39
CTNND1-227ENST00000530748 U3KQK5 164 aa6.36□□□□□ -1.39
CTNND1-227ENST00000530748 H0Y9J4 135 aa6.36□□□□□ -1.39
CTNND1-227ENST00000530748 FSHBP01225 129 aa6.36□□□□□ -1.39
CTNND1-227ENST00000530748 GDF5OSQ5U4N7 250 aa6.36□□□□□ -1.39
CTNND1-227ENST00000530748 MYO7BQ6PIF6 2116 aa6.35□□□□□ -1.39
CTNND1-227ENST00000530748 INAFM1C9JVW0 142 aa6.35□□□□□ -1.39
CTNND1-227ENST00000530748 TCL1BO95988 128 aa6.35□□□□□ -1.39
CTNND1-227ENST00000530748 ZNF843Q8N446 348 aa6.35□□□□□ -1.39
CTNND1-227ENST00000530748 WFDC11Q8NEX6 87 aa6.35□□□□□ -1.39
CTNND1-227ENST00000530748 ZNF295-AS1Q8N0V1 137 aa6.35□□□□□ -1.39
CTNND1-227ENST00000530748 C14orf132Q9NPU4 83 aa6.35□□□□□ -1.39
CTNND1-227ENST00000530748 B5MCH6 92 aa6.35□□□□□ -1.39
CTNND1-227ENST00000530748 G3V4G9 280 aa6.35□□□□□ -1.39
CTNND1-227ENST00000530748 MIFP14174 115 aa6.35□□□□□ -1.39
CTNND1-227ENST00000530748 HIST2H2BDQ6DRA6 164 aa6.35□□□□□ -1.39
CTNND1-227ENST00000530748 ZNF702PQ9H963 129 aa6.35□□□□□ -1.39
CTNND1-227ENST00000530748 FAM186AA6NE01 2351 aa6.35□□□□□ -1.39
CTNND1-227ENST00000530748 MLST8Q9BVC4 326 aa6.34□□□□□ -1.39
CTNND1-227ENST00000530748 DEFB131BA0A096LNP1 70 aa6.34□□□□□ -1.39
CTNND1-227ENST00000530748 Q6ZSV7 163 aa6.34□□□□□ -1.39
CTNND1-227ENST00000530748 UBE2D4Q9Y2X8 147 aa6.34□□□□□ -1.39
CTNND1-227ENST00000530748 SPANXB1Q9NS25 103 aaPredicted RBP6.34□□□□□ -1.39
CTNND1-227ENST00000530748 RNASE8Q8TDE3 154 aaKnown RBP6.34□□□□□ -1.39
CTNND1-227ENST00000530748 PSMG3-AS1Q96PY0 264 aa6.34□□□□□ -1.39
CTNND1-227ENST00000530748 PRO3102Q9H379 93 aa6.34□□□□□ -1.39
CTNND1-227ENST00000530748 HEATR1Q9H583 2144 aaKnown RBP6.34□□□□□ -1.4
CTNND1-227ENST00000530748 IGLV4-3A0A075B6K6 122 aa6.33□□□□□ -1.4
CTNND1-227ENST00000530748 C22orf34Q6ZV56 151 aa6.33□□□□□ -1.4
CTNND1-227ENST00000530748 IGKV2-24A0A0C4DH68 120 aa6.33□□□□□ -1.4
CTNND1-227ENST00000530748 TRBV6-4A0A1B0GX49 114 aa6.33□□□□□ -1.4
CTNND1-227ENST00000530748 UPK3BQ9BT76 320 aa6.33□□□□□ -1.4
CTNND1-227ENST00000530748 FAM19A1Q7Z5A9 133 aa6.33□□□□□ -1.4
CTNND1-227ENST00000530748 RNF185Q96GF1 192 aa6.32□□□□□ -1.4
CTNND1-227ENST00000530748 SNRNP200O75643 2136 aaKnown RBP6.32□□□□□ -1.4
CTNND1-227ENST00000530748 TRBV6-8A0A0A6YYG3 113 aa6.32□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 65.7 ms