RNA–Protein interactions for RNA: ENST00000527323.5

CAPN1-208, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN1, Length 3,086 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-208ENST00000527323 SORL1Q92673 2214 aa9.4□□□□□ -0.91
CAPN1-208ENST00000527323 CRYGDP07320 174 aa9.4□□□□□ -0.91
CAPN1-208ENST00000527323 PMVKQ15126 192 aa9.4□□□□□ -0.91
CAPN1-208ENST00000527323 PAPPA-AS1Q5QFB9 102 aa9.4□□□□□ -0.91
CAPN1-208ENST00000527323 NDUFA4O00483 81 aa9.39□□□□□ -0.91
CAPN1-208ENST00000527323 SMCPP49901 116 aaPredicted RBP9.39□□□□□ -0.91
CAPN1-208ENST00000527323 UBE2D1P51668 147 aa9.39□□□□□ -0.91
CAPN1-208ENST00000527323 LYRM7Q5U5X0 104 aa9.39□□□□□ -0.91
CAPN1-208ENST00000527323 FAM74A4Q5TZK3 123 aa9.39□□□□□ -0.91
CAPN1-208ENST00000527323 F8P00451 2351 aa9.38□□□□□ -0.91
CAPN1-208ENST00000527323 VCYO14598 125 aa9.38□□□□□ -0.91
CAPN1-208ENST00000527323 RHPN1-AS1Q9BWJ2 59 aa9.38□□□□□ -0.91
CAPN1-208ENST00000527323 ZNF256Q9Y2P7 627 aaPredicted RBP9.38□□□□□ -0.91
CAPN1-208ENST00000527323 A0A0J9YY99 117 aa9.38□□□□□ -0.91
CAPN1-208ENST00000527323 TSHBP01222 138 aa9.38□□□□□ -0.91
CAPN1-208ENST00000527323 NFE4Q86UQ8 179 aa9.38□□□□□ -0.91
CAPN1-208ENST00000527323 NDUFA11Q86Y39 141 aa9.38□□□□□ -0.91
CAPN1-208ENST00000527323 SMR3AQ99954 134 aa9.38□□□□□ -0.91
CAPN1-208ENST00000527323 CD7P09564 240 aa9.37□□□□□ -0.91
CAPN1-208ENST00000527323 MED14OSP0DP75 135 aa9.37□□□□□ -0.91
CAPN1-208ENST00000527323 IGLV4-69A0A075B6H9 119 aa9.37□□□□□ -0.91
CAPN1-208ENST00000527323 IGHV1-69DA0A0B4J2H0 117 aa9.37□□□□□ -0.91
CAPN1-208ENST00000527323 SOCS3O14543 225 aa9.37□□□□□ -0.91
CAPN1-208ENST00000527323 SPINK8P0C7L1 97 aa9.37□□□□□ -0.91
CAPN1-208ENST00000527323 SUMO4Q6EEV6 95 aa9.37□□□□□ -0.91
CAPN1-208ENST00000527323 Q6ZS46 218 aa9.37□□□□□ -0.91
CAPN1-208ENST00000527323 SDHAF1A6NFY7 115 aa9.37□□□□□ -0.91
CAPN1-208ENST00000527323 LGALS3P17931 250 aaKnown RBP9.37□□□□□ -0.91
CAPN1-208ENST00000527323 TRAV12-3A0A0B4J271 114 aa9.36□□□□□ -0.91
CAPN1-208ENST00000527323 IGIPA6NJ69 53 aa9.36□□□□□ -0.91
CAPN1-208ENST00000527323 TCL1BO95988 128 aa9.36□□□□□ -0.91
CAPN1-208ENST00000527323 ATP6V0E2Q8NHE4 81 aa9.36□□□□□ -0.91
CAPN1-208ENST00000527323 CR1P17927 2039 aa9.36□□□□□ -0.91
CAPN1-208ENST00000527323 H7C2G1 150 aa9.35□□□□□ -0.91
CAPN1-208ENST00000527323 CFC1BP0CG36 223 aa9.35□□□□□ -0.91
CAPN1-208ENST00000527323 CFC1P0CG37 223 aa9.35□□□□□ -0.91
CAPN1-208ENST00000527323 TMEM141Q96I45 108 aa9.35□□□□□ -0.91
CAPN1-208ENST00000527323 RAX2Q96IS3 184 aa9.35□□□□□ -0.91
CAPN1-208ENST00000527323 A8MWV9 139 aa9.35□□□□□ -0.91
CAPN1-208ENST00000527323 IGKV3-20P01619 116 aa9.35□□□□□ -0.91
CAPN1-208ENST00000527323 POLR2KP53803 58 aaKnown RBP9.35□□□□□ -0.91
CAPN1-208ENST00000527323 TSPEAR-AS2P59090 65 aa9.35□□□□□ -0.91
CAPN1-208ENST00000527323 LINC00315P59091 139 aa9.35□□□□□ -0.91
CAPN1-208ENST00000527323 UBE2D3P61077 147 aa9.35□□□□□ -0.91
CAPN1-208ENST00000527323 UBE2D2P62837 147 aa9.35□□□□□ -0.91
CAPN1-208ENST00000527323 PPDPFLQ8WWR9 84 aa9.35□□□□□ -0.91
CAPN1-208ENST00000527323 KIF25-AS1Q9Y6Z4 181 aa9.35□□□□□ -0.91
CAPN1-208ENST00000527323 IGHV4OR15-8A0A075B7B6 117 aa9.35□□□□□ -0.91
CAPN1-208ENST00000527323 A0A087WW49 117 aa9.35□□□□□ -0.91
CAPN1-208ENST00000527323 J3QQQ9 107 aa9.35□□□□□ -0.91
CAPN1-208ENST00000527323 CDIP1Q9H305 208 aa9.35□□□□□ -0.91
CAPN1-208ENST00000527323 IGHV3-64A0A075B6Q5 118 aa9.34□□□□□ -0.91
CAPN1-208ENST00000527323 MT-ATP8P03928 68 aa9.34□□□□□ -0.91
CAPN1-208ENST00000527323 MSMBP08118 114 aa9.34□□□□□ -0.91
CAPN1-208ENST00000527323 ZNF56Q15929 161 aa9.34□□□□□ -0.91
CAPN1-208ENST00000527323 ZNRF2Q8NHG8 242 aa9.34□□□□□ -0.91
CAPN1-208ENST00000527323 USMG5Q96IX5 58 aa9.34□□□□□ -0.91
CAPN1-208ENST00000527323 FAM19A4Q96LR4 140 aa9.34□□□□□ -0.91
CAPN1-208ENST00000527323 OPRPNQ99935 248 aaPredicted RBP9.34□□□□□ -0.91
CAPN1-208ENST00000527323 PRO1854Q9UHT4 67 aa9.34□□□□□ -0.91
CAPN1-208ENST00000527323 ATRQ13535 2644 aa9.34□□□□□ -0.91
CAPN1-208ENST00000527323 TRBV20-1A0A075B6N2 111 aa9.34□□□□□ -0.91
CAPN1-208ENST00000527323 IGHV3-30P01768 117 aa9.34□□□□□ -0.91
CAPN1-208ENST00000527323 IGHV3-30-5P0DP03 117 aa9.34□□□□□ -0.91
CAPN1-208ENST00000527323 DEFB113Q30KQ7 82 aa9.34□□□□□ -0.91
CAPN1-208ENST00000527323 TEN1Q86WV5 123 aa9.34□□□□□ -0.91
CAPN1-208ENST00000527323 SLC25A29Q8N8R3 303 aa9.34□□□□□ -0.91
CAPN1-208ENST00000527323 GEMIN7Q9H840 131 aaKnown RBP9.34□□□□□ -0.91
CAPN1-208ENST00000527323 MUC4Q99102 2169 aa9.34□□□□□ -0.91
CAPN1-208ENST00000527323 C10orf126Q8N4M7 172 aa9.33□□□□□ -0.92
CAPN1-208ENST00000527323 IGHV1-69P01742 117 aa9.33□□□□□ -0.92
CAPN1-208ENST00000527323 ID1P41134 155 aa9.33□□□□□ -0.92
CAPN1-208ENST00000527323 CARD19Q96LW7 228 aa9.33□□□□□ -0.92
CAPN1-208ENST00000527323 TIMM17AQ99595 171 aa9.33□□□□□ -0.92
CAPN1-208ENST00000527323 TRAV2A0A0B4J234 112 aa9.33□□□□□ -0.92
CAPN1-208ENST00000527323 CRYBA4P53673 196 aa9.33□□□□□ -0.92
CAPN1-208ENST00000527323 C19orf54Q5BKX5 351 aa9.33□□□□□ -0.92
CAPN1-208ENST00000527323 TCTEX1D4Q5JR98 221 aa9.33□□□□□ -0.92
CAPN1-208ENST00000527323 DAZ1Q9NQZ3 744 aaKnown RBP9.33□□□□□ -0.92
CAPN1-208ENST00000527323 BLCAPP62952 87 aa9.32□□□□□ -0.92
CAPN1-208ENST00000527323 MAST4O15021 2626 aa9.32□□□□□ -0.92
CAPN1-208ENST00000527323 H3BUX3 64 aa9.32□□□□□ -0.92
CAPN1-208ENST00000527323 EDN2P20800 178 aa9.32□□□□□ -0.92
CAPN1-208ENST00000527323 TRAV12-2A0A075B6T6 113 aa9.31□□□□□ -0.92
CAPN1-208ENST00000527323 NXPH4O95158 308 aa9.31□□□□□ -0.92
CAPN1-208ENST00000527323 XGP55808 180 aa9.31□□□□□ -0.92
CAPN1-208ENST00000527323 RPL32P62910 135 aaKnown RBP9.31□□□□□ -0.92
CAPN1-208ENST00000527323 Q1RN00 199 aa9.31□□□□□ -0.92
CAPN1-208ENST00000527323 ZNF876PQ49A33 203 aa9.31□□□□□ -0.92
CAPN1-208ENST00000527323 Q6ZUT4 128 aa9.31□□□□□ -0.92
CAPN1-208ENST00000527323 APRG1Q8IVJ8 170 aa9.31□□□□□ -0.92
CAPN1-208ENST00000527323 POM121L12Q8N7R1 296 aa9.31□□□□□ -0.92
CAPN1-208ENST00000527323 TRBV7-9A0A0J9YWB2 115 aa9.31□□□□□ -0.92
CAPN1-208ENST00000527323 KLLNB2CW77 178 aa9.31□□□□□ -0.92
CAPN1-208ENST00000527323 FHL3Q13643 280 aa9.31□□□□□ -0.92
CAPN1-208ENST00000527323 TRAV26-1A0A087WT03 109 aa9.3□□□□□ -0.92
CAPN1-208ENST00000527323 ZNF688P0C7X2 276 aa9.3□□□□□ -0.92
CAPN1-208ENST00000527323 ANKRD29Q8N6D5 301 aa9.3□□□□□ -0.92
CAPN1-208ENST00000527323 MDFICQ9P1T7 246 aa9.3□□□□□ -0.92
CAPN1-208ENST00000527323 C9JAW5 83 aa9.3□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 65.2 ms