RNA–Protein interactions for RNA: ENST00000526734.5

VPS28-206, Transcript of VPS28, ESCRT-I subunit, humanhuman

TSL 2

Gene VPS28, Length 570 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS28-206ENST00000526734 TRBV6-8A0A0A6YYG3 113 aa13.78□□□□□ -0.2
VPS28-206ENST00000526734 LRCOL1A6NCL2 159 aa13.78□□□□□ -0.2
VPS28-206ENST00000526734 DAZ4Q86SG3 579 aaKnown RBP13.78□□□□□ -0.2
VPS28-206ENST00000526734 NUDT10Q8NFP7 164 aa13.78□□□□□ -0.2
VPS28-206ENST00000526734 NUDT11Q96G61 164 aa13.78□□□□□ -0.2
VPS28-206ENST00000526734 DAZ3Q9NR90 486 aaKnown RBP13.78□□□□□ -0.2
VPS28-206ENST00000526734 CTRLP40313 264 aa13.77□□□□□ -0.21
VPS28-206ENST00000526734 SSTP61278 116 aa13.77□□□□□ -0.21
VPS28-206ENST00000526734 DNAJC30Q96LL9 226 aa13.77□□□□□ -0.21
VPS28-206ENST00000526734 RPP21Q9H633 154 aaKnown RBP13.77□□□□□ -0.21
VPS28-206ENST00000526734 Q8N3U1 123 aa13.76□□□□□ -0.21
VPS28-206ENST00000526734 MGPP08493 103 aa13.75□□□□□ -0.21
VPS28-206ENST00000526734 LYZL1Q6UWQ5 148 aa13.75□□□□□ -0.21
VPS28-206ENST00000526734 MAPKAPK5-AS1Q8N8E1 139 aa13.75□□□□□ -0.21
VPS28-206ENST00000526734 OCC1Q8TAD7 63 aa13.75□□□□□ -0.21
VPS28-206ENST00000526734 CNFNQ9BYD5 112 aa13.75□□□□□ -0.21
VPS28-206ENST00000526734 PCLOQ9Y6V0 5065 aa13.75□□□□□ -0.21
VPS28-206ENST00000526734 NKX2-5P52952 324 aaPredicted RBP13.74□□□□□ -0.21
VPS28-206ENST00000526734 Q8N814 137 aa13.74□□□□□ -0.21
VPS28-206ENST00000526734 DPH3P1Q9H4G8 78 aa13.74□□□□□ -0.21
VPS28-206ENST00000526734 K7EN84 100 aa13.73□□□□□ -0.21
VPS28-206ENST00000526734 M0QY20 66 aa13.73□□□□□ -0.21
VPS28-206ENST00000526734 FAM231DQ6ZW35 169 aa13.73□□□□□ -0.21
VPS28-206ENST00000526734 IGLV5-52A0A0A0MRZ9 124 aa13.72□□□□□ -0.21
VPS28-206ENST00000526734 A0A1B0GVG6 124 aa13.72□□□□□ -0.21
VPS28-206ENST00000526734 NTF3P20783 257 aa13.72□□□□□ -0.21
VPS28-206ENST00000526734 GCSHP23434 173 aa13.72□□□□□ -0.21
VPS28-206ENST00000526734 Q0VG73 95 aa13.72□□□□□ -0.21
VPS28-206ENST00000526734 EIF5A2Q9GZV4 153 aaKnown RBP13.72□□□□□ -0.21
VPS28-206ENST00000526734 RNASE7Q9H1E1 156 aaKnown RBP13.72□□□□□ -0.21
VPS28-206ENST00000526734 KLK12Q9UKR0 248 aa13.72□□□□□ -0.21
VPS28-206ENST00000526734 SUMO4Q6EEV6 95 aa13.71□□□□□ -0.21
VPS28-206ENST00000526734 Q8N1X5 172 aa13.71□□□□□ -0.21
VPS28-206ENST00000526734 FAM210AQ96ND0 272 aa13.71□□□□□ -0.21
VPS28-206ENST00000526734 DNAH5Q8TE73 4624 aa13.7□□□□□ -0.22
VPS28-206ENST00000526734 TMEM262E9PQX1 116 aa13.7□□□□□ -0.22
VPS28-206ENST00000526734 CT83Q5H943 113 aa13.7□□□□□ -0.22
VPS28-206ENST00000526734 RASL11AQ6T310 242 aa13.7□□□□□ -0.22
VPS28-206ENST00000526734 ATRAIDQ6UW56 229 aa13.7□□□□□ -0.22
VPS28-206ENST00000526734 CHCHD5Q9BSY4 110 aa13.7□□□□□ -0.22
VPS28-206ENST00000526734 HSPG2P98160 4391 aa13.7□□□□□ -0.22
VPS28-206ENST00000526734 TRBV25-1A0A075B6N4 114 aa13.69□□□□□ -0.22
VPS28-206ENST00000526734 A8MWL6 223 aa13.69□□□□□ -0.22
VPS28-206ENST00000526734 GATCO43716 136 aaKnown RBP13.69□□□□□ -0.22
VPS28-206ENST00000526734 FUSP35637 526 aaKnown RBP eCLIP13.69□□□□□ -0.22
VPS28-206ENST00000526734 FRZBQ92765 325 aa13.69□□□□□ -0.22
VPS28-206ENST00000526734 UBE2WQ96B02 151 aa13.69□□□□□ -0.22
VPS28-206ENST00000526734 SMIM7Q9BQ49 75 aa13.69□□□□□ -0.22
VPS28-206ENST00000526734 CRPP02741 224 aa13.68□□□□□ -0.22
VPS28-206ENST00000526734 CEBPGP53567 150 aa13.68□□□□□ -0.22
VPS28-206ENST00000526734 TWIST1Q15672 202 aa13.68□□□□□ -0.22
VPS28-206ENST00000526734 IQCJQ1A5X6 159 aa13.68□□□□□ -0.22
VPS28-206ENST00000526734 SMIM15Q7Z3B0 74 aa13.68□□□□□ -0.22
VPS28-206ENST00000526734 NIT2Q9NQR4 276 aa13.68□□□□□ -0.22
VPS28-206ENST00000526734 IGKV2D-24A0A075B6R9 120 aa13.67□□□□□ -0.22
VPS28-206ENST00000526734 IGHV1-24A0A0C4DH33 117 aa13.67□□□□□ -0.22
VPS28-206ENST00000526734 KRTAP10-1P60331 282 aa13.67□□□□□ -0.22
VPS28-206ENST00000526734 NTM-AS1Q6ZSK4 140 aa13.67□□□□□ -0.22
VPS28-206ENST00000526734 KRTAP17-1Q9BYP8 105 aa13.67□□□□□ -0.22
VPS28-206ENST00000526734 APOBP04114 4563 aaKnown RBP13.67□□□□□ -0.22
VPS28-206ENST00000526734 MPV17L2Q567V2 206 aa13.66□□□□□ -0.22
VPS28-206ENST00000526734 PGLYRP4Q96LB8 373 aa13.66□□□□□ -0.22
VPS28-206ENST00000526734 TMEM70Q9BUB7 260 aa13.66□□□□□ -0.22
VPS28-206ENST00000526734 ZNF727A8MUV8 499 aa13.65□□□□□ -0.22
VPS28-206ENST00000526734 ANGP03950 147 aaKnown RBP13.65□□□□□ -0.22
VPS28-206ENST00000526734 GTSF1Q8WW33 167 aa13.65□□□□□ -0.22
VPS28-206ENST00000526734 C1orf43Q9BWL3 253 aa13.65□□□□□ -0.22
VPS28-206ENST00000526734 SRP19P09132 144 aaKnown RBP13.64□□□□□ -0.23
VPS28-206ENST00000526734 FOXA3P55318 350 aaPredicted RBP13.64□□□□□ -0.23
VPS28-206ENST00000526734 LINC01551Q86U37 167 aa13.64□□□□□ -0.23
VPS28-206ENST00000526734 C15orf54Q8N8G6 183 aa13.64□□□□□ -0.23
VPS28-206ENST00000526734 Q8N976 141 aa13.64□□□□□ -0.23
VPS28-206ENST00000526734 BORCS7Q96B45 105 aa13.64□□□□□ -0.23
VPS28-206ENST00000526734 WFDC2Q14508 124 aa13.63□□□□□ -0.23
VPS28-206ENST00000526734 MIAQ16674 131 aa13.63□□□□□ -0.23
VPS28-206ENST00000526734 FAM74A3Q4VXF1 159 aa13.63□□□□□ -0.23
VPS28-206ENST00000526734 TEX261Q6UWH6 196 aa13.63□□□□□ -0.23
VPS28-206ENST00000526734 GFRA4Q9GZZ7 299 aa13.63□□□□□ -0.23
VPS28-206ENST00000526734 FAM231BA6NCW3 169 aa13.62□□□□□ -0.23
VPS28-206ENST00000526734 XGP55808 180 aa13.62□□□□□ -0.23
VPS28-206ENST00000526734 RBX1P62877 108 aa13.62□□□□□ -0.23
VPS28-206ENST00000526734 ENHOQ6UWT2 76 aa13.62□□□□□ -0.23
VPS28-206ENST00000526734 BAALCQ8WXS3 180 aa13.62□□□□□ -0.23
VPS28-206ENST00000526734 KRTAP4-5Q9BYR2 181 aa13.62□□□□□ -0.23
VPS28-206ENST00000526734 OSTCQ9NRP0 149 aa13.62□□□□□ -0.23
VPS28-206ENST00000526734 ABCA13Q86UQ4 5058 aa13.61□□□□□ -0.23
VPS28-206ENST00000526734 C14orf177Q52M58 125 aa13.61□□□□□ -0.23
VPS28-206ENST00000526734 TSKUQ8WUA8 353 aa13.61□□□□□ -0.23
VPS28-206ENST00000526734 TMEM243Q9BU79 118 aa13.61□□□□□ -0.23
VPS28-206ENST00000526734 PRR34Q9NV39 138 aa13.61□□□□□ -0.23
VPS28-206ENST00000526734 LECT2O14960 151 aa13.6□□□□□ -0.23
VPS28-206ENST00000526734 GAGE6Q13070 117 aa13.6□□□□□ -0.23
VPS28-206ENST00000526734 COTL1Q14019 142 aa13.6□□□□□ -0.23
VPS28-206ENST00000526734 SMDT1Q9H4I9 107 aa13.6□□□□□ -0.23
VPS28-206ENST00000526734 GATD1Q8NB37 220 aa13.59□□□□□ -0.23
VPS28-206ENST00000526734 A0A1B0GUV1 79 aa13.58□□□□□ -0.24
VPS28-206ENST00000526734 A0A1B0GUT8 65 aa13.57□□□□□ -0.24
VPS28-206ENST00000526734 EPM2AB3EWF7 344 aa13.57□□□□□ -0.24
VPS28-206ENST00000526734 AMTP48728 403 aa13.57□□□□□ -0.24
VPS28-206ENST00000526734 PEA15Q15121 130 aa13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms