RNA–Protein interactions for RNA: ENST00000525459.1

PTPRK-218, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 2 BASIC

Gene PTPRK, Length 1,722 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-218ENST00000525459 GAGE5Q13069 117 aa12.95□□□□□ -0.34
PTPRK-218ENST00000525459 GAGE13Q4V321 117 aa12.95□□□□□ -0.34
PTPRK-218ENST00000525459 NEXN-AS1Q8NBZ9 246 aa12.95□□□□□ -0.34
PTPRK-218ENST00000525459 ATP6V0E2Q8NHE4 81 aa12.95□□□□□ -0.34
PTPRK-218ENST00000525459 NIT2Q9NQR4 276 aa12.95□□□□□ -0.34
PTPRK-218ENST00000525459 FAM104BQ5XKR9 115 aa12.94□□□□□ -0.34
PTPRK-218ENST00000525459 ZNRF2Q8NHG8 242 aa12.94□□□□□ -0.34
PTPRK-218ENST00000525459 TNFRSF18Q9Y5U5 241 aa12.94□□□□□ -0.34
PTPRK-218ENST00000525459 PPP1R17O96001 155 aa12.93□□□□□ -0.34
PTPRK-218ENST00000525459 RAB4AP20338 218 aa12.93□□□□□ -0.34
PTPRK-218ENST00000525459 UBE2D3P61077 147 aa12.93□□□□□ -0.34
PTPRK-218ENST00000525459 UBE2D2P62837 147 aa12.93□□□□□ -0.34
PTPRK-218ENST00000525459 AMN1Q8IY45 258 aa12.93□□□□□ -0.34
PTPRK-218ENST00000525459 UPK3BQ9BT76 320 aa12.93□□□□□ -0.34
PTPRK-218ENST00000525459 MRPS16Q9Y3D3 137 aaKnown RBP12.93□□□□□ -0.34
PTPRK-218ENST00000525459 LY6G6CO95867 125 aa12.93□□□□□ -0.34
PTPRK-218ENST00000525459 ESRGQ1W209 222 aa12.93□□□□□ -0.34
PTPRK-218ENST00000525459 COX19Q49B96 90 aa12.93□□□□□ -0.34
PTPRK-218ENST00000525459 LYPD5Q6UWN5 251 aa12.93□□□□□ -0.34
PTPRK-218ENST00000525459 RNF185Q96GF1 192 aa12.93□□□□□ -0.34
PTPRK-218ENST00000525459 GTSF1LQ9H1H1 148 aa12.93□□□□□ -0.34
PTPRK-218ENST00000525459 DAZ4Q86SG3 579 aaKnown RBP12.92□□□□□ -0.34
PTPRK-218ENST00000525459 DAZ3Q9NR90 486 aaKnown RBP12.92□□□□□ -0.34
PTPRK-218ENST00000525459 LINC00588Q9Y4M8 146 aa12.92□□□□□ -0.34
PTPRK-218ENST00000525459 URGCP-MRPS24S4R325 110 aa12.92□□□□□ -0.34
PTPRK-218ENST00000525459 TMEM97Q5BJF2 176 aa12.91□□□□□ -0.34
PTPRK-218ENST00000525459 TRAV26-2A0A0B4J265 109 aa12.91□□□□□ -0.34
PTPRK-218ENST00000525459 Q9UF83 564 aa12.91□□□□□ -0.34
PTPRK-218ENST00000525459 PPBPP02775 128 aa12.9□□□□□ -0.34
PTPRK-218ENST00000525459 TRBV6-5A0A0K0K1A5 114 aa12.89□□□□□ -0.35
PTPRK-218ENST00000525459 OR10J3Q5JRS4 329 aa12.89□□□□□ -0.35
PTPRK-218ENST00000525459 HLA-DQA1P01909 254 aa12.88□□□□□ -0.35
PTPRK-218ENST00000525459 MRPL51Q4U2R6 128 aaKnown RBP12.88□□□□□ -0.35
PTPRK-218ENST00000525459 LELP1Q5T871 98 aa12.88□□□□□ -0.35
PTPRK-218ENST00000525459 MT-ND6P03923 174 aa12.88□□□□□ -0.35
PTPRK-218ENST00000525459 PLECQ15149 4684 aaKnown RBP12.87□□□□□ -0.35
PTPRK-218ENST00000525459 TRAV8-6A0A0B4J262 113 aa12.87□□□□□ -0.35
PTPRK-218ENST00000525459 CKS2P33552 79 aa12.87□□□□□ -0.35
PTPRK-218ENST00000525459 GNB1LQ9BYB4 327 aa12.87□□□□□ -0.35
PTPRK-218ENST00000525459 TRBV24-1A0A075B6N3 115 aa12.86□□□□□ -0.35
PTPRK-218ENST00000525459 ELOBQ15370 118 aa12.86□□□□□ -0.35
PTPRK-218ENST00000525459 RPL39LQ96EH5 51 aaKnown RBP12.86□□□□□ -0.35
PTPRK-218ENST00000525459 SMCO4Q9NRQ5 59 aa12.86□□□□□ -0.35
PTPRK-218ENST00000525459 PHOX2AO14813 284 aa12.85□□□□□ -0.35
PTPRK-218ENST00000525459 ATRAIDQ6UW56 229 aa12.85□□□□□ -0.35
PTPRK-218ENST00000525459 TMEM136Q6ZRR5 245 aa12.85□□□□□ -0.35
PTPRK-218ENST00000525459 ORMDL3Q8N138 153 aa12.85□□□□□ -0.35
PTPRK-218ENST00000525459 ST20Q9HBF5 79 aa12.85□□□□□ -0.35
PTPRK-218ENST00000525459 LAMTOR2Q9Y2Q5 125 aa12.85□□□□□ -0.35
PTPRK-218ENST00000525459 SDHAF1A6NFY7 115 aa12.84□□□□□ -0.35
PTPRK-218ENST00000525459 D6R8Y8 96 aa12.84□□□□□ -0.35
PTPRK-218ENST00000525459 SIVA1O15304 175 aa12.84□□□□□ -0.35
PTPRK-218ENST00000525459 NCR2O95944 276 aa12.84□□□□□ -0.35
PTPRK-218ENST00000525459 TRBV6-8A0A0A6YYG3 113 aa12.83□□□□□ -0.36
PTPRK-218ENST00000525459 K7EP13 123 aa12.83□□□□□ -0.36
PTPRK-218ENST00000525459 NRACQ8N912 160 aa12.83□□□□□ -0.36
PTPRK-218ENST00000525459 C20orf78Q9BR46 151 aa12.83□□□□□ -0.36
PTPRK-218ENST00000525459 Q9H8V8 135 aa12.83□□□□□ -0.36
PTPRK-218ENST00000525459 LYSTQ99698 3801 aa12.83□□□□□ -0.36
PTPRK-218ENST00000525459 RPS10P46783 165 aaKnown RBP12.82□□□□□ -0.36
PTPRK-218ENST00000525459 PKIAP61925 76 aa12.82□□□□□ -0.36
PTPRK-218ENST00000525459 SUMO2P61956 95 aaKnown RBP12.82□□□□□ -0.36
PTPRK-218ENST00000525459 COTL1Q14019 142 aa12.82□□□□□ -0.36
PTPRK-218ENST00000525459 TTC32Q5I0X7 151 aa12.82□□□□□ -0.36
PTPRK-218ENST00000525459 ALMS1Q8TCU4 4167 aa12.82□□□□□ -0.36
PTPRK-218ENST00000525459 TRBV25-1A0A075B6N4 114 aa12.82□□□□□ -0.36
PTPRK-218ENST00000525459 IGHV3-38A0A0C4DH36 116 aa12.82□□□□□ -0.36
PTPRK-218ENST00000525459 SMKR1H3BMG3 65 aa12.82□□□□□ -0.36
PTPRK-218ENST00000525459 TMEM70Q9BUB7 260 aa12.82□□□□□ -0.36
PTPRK-218ENST00000525459 TRBV27A0A0K0K1C4 114 aa12.81□□□□□ -0.36
PTPRK-218ENST00000525459 I3L3M4 83 aa12.81□□□□□ -0.36
PTPRK-218ENST00000525459 RPL32P62910 135 aaKnown RBP12.81□□□□□ -0.36
PTPRK-218ENST00000525459 TGIF2-C20orf24A0A0A6YYL0 155 aa12.8□□□□□ -0.36
PTPRK-218ENST00000525459 GAS8-AS1O95177 125 aa12.8□□□□□ -0.36
PTPRK-218ENST00000525459 TNFRSF6BO95407 300 aa12.8□□□□□ -0.36
PTPRK-218ENST00000525459 APCSP02743 223 aa12.8□□□□□ -0.36
PTPRK-218ENST00000525459 DNAH10OSP0CZ25 163 aa12.8□□□□□ -0.36
PTPRK-218ENST00000525459 WFDC10BQ8IUB3 73 aa12.8□□□□□ -0.36
PTPRK-218ENST00000525459 PRELID3AQ96N28 172 aa12.8□□□□□ -0.36
PTPRK-218ENST00000525459 IGHV1-24A0A0C4DH33 117 aa12.79□□□□□ -0.36
PTPRK-218ENST00000525459 TCAPO15273 167 aa12.79□□□□□ -0.36
PTPRK-218ENST00000525459 S100A1P23297 94 aa12.79□□□□□ -0.36
PTPRK-218ENST00000525459 POLR2KP53803 58 aaKnown RBP12.79□□□□□ -0.36
PTPRK-218ENST00000525459 IQCJQ1A5X6 159 aa12.79□□□□□ -0.36
PTPRK-218ENST00000525459 CBLN2Q8IUK8 224 aa12.79□□□□□ -0.36
PTPRK-218ENST00000525459 YPEL4Q96NS1 127 aa12.79□□□□□ -0.36
PTPRK-218ENST00000525459 CHCHD7Q9BUK0 85 aa12.79□□□□□ -0.36
PTPRK-218ENST00000525459 TRAV9-2A0A087WT02 112 aa12.79□□□□□ -0.36
PTPRK-218ENST00000525459 VCYO14598 125 aa12.79□□□□□ -0.36
PTPRK-218ENST00000525459 PMCHP20382 165 aa12.79□□□□□ -0.36
PTPRK-218ENST00000525459 LINC01556Q5JQF7 62 aa12.79□□□□□ -0.36
PTPRK-218ENST00000525459 KIR2DL4Q99706 377 aa12.78□□□□□ -0.36
PTPRK-218ENST00000525459 NPYP01303 97 aa12.77□□□□□ -0.36
PTPRK-218ENST00000525459 NTM-AS1Q6ZSK4 140 aa12.77□□□□□ -0.36
PTPRK-218ENST00000525459 C10orf126Q8N4M7 172 aa12.77□□□□□ -0.36
PTPRK-218ENST00000525459 NBDYA0A0U1RRE5 68 aa12.76□□□□□ -0.37
PTPRK-218ENST00000525459 AMTP48728 403 aa12.76□□□□□ -0.37
PTPRK-218ENST00000525459 SMIM2Q9BVW6 85 aa12.76□□□□□ -0.37
PTPRK-218ENST00000525459 MRPL18Q9H0U6 180 aaKnown RBP12.76□□□□□ -0.37
PTPRK-218ENST00000525459 PRSS47A8MTI9 375 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 97.1 ms