RNA–Protein interactions for RNA: ENST00000523517.5

IKBKB-228, Transcript of inhibitor of nuclear factor kappa B kinase subunit beta, humanhuman

TSL 1 (best)

Gene IKBKB, Length 2,378 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IKBKB-228ENST00000523517 SFTA2Q6UW10 78 aa13.15□□□□□ -0.3
IKBKB-228ENST00000523517 Q6YL49 198 aa13.15□□□□□ -0.3
IKBKB-228ENST00000523517 ARL17AQ8IVW1 177 aa13.15□□□□□ -0.3
IKBKB-228ENST00000523517 KNCNA6PVL3 124 aa13.14□□□□□ -0.31
IKBKB-228ENST00000523517 LEPROTO15243 131 aa13.14□□□□□ -0.31
IKBKB-228ENST00000523517 PKD1L2Q7Z442 2459 aa13.14□□□□□ -0.31
IKBKB-228ENST00000523517 CFC1BP0CG36 223 aa13.14□□□□□ -0.31
IKBKB-228ENST00000523517 CFC1P0CG37 223 aa13.14□□□□□ -0.31
IKBKB-228ENST00000523517 CFAP126Q5VTH2 177 aa13.14□□□□□ -0.31
IKBKB-228ENST00000523517 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP13.14□□□□□ -0.311e-7■■■■■ 30.7
IKBKB-228ENST00000523517 GAGE12HA6NDE8 117 aa13.13□□□□□ -0.31
IKBKB-228ENST00000523517 TMEM238C9JI98 176 aa13.13□□□□□ -0.31
IKBKB-228ENST00000523517 PSMB2P49721 201 aa13.13□□□□□ -0.31
IKBKB-228ENST00000523517 IGLV4-3A0A075B6K6 122 aa13.13□□□□□ -0.31
IKBKB-228ENST00000523517 ZNF22P17026 224 aaPredicted RBP13.13□□□□□ -0.31
IKBKB-228ENST00000523517 VCX2Q9H322 139 aa13.13□□□□□ -0.31
IKBKB-228ENST00000523517 DOPEY1Q5JWR5 2465 aa13.13□□□□□ -0.31
IKBKB-228ENST00000523517 FSHBP01225 129 aa13.12□□□□□ -0.31
IKBKB-228ENST00000523517 HTN1P15515 57 aa13.12□□□□□ -0.31
IKBKB-228ENST00000523517 SIGMAR1Q99720 223 aa13.12□□□□□ -0.31
IKBKB-228ENST00000523517 EDA2RQ9HAV5 297 aa13.12□□□□□ -0.31
IKBKB-228ENST00000523517 RHODO00212 210 aa13.12□□□□□ -0.31
IKBKB-228ENST00000523517 SMCPP49901 116 aaPredicted RBP13.12□□□□□ -0.31
IKBKB-228ENST00000523517 DEFB131AP59861 70 aa13.12□□□□□ -0.31
IKBKB-228ENST00000523517 LYRM7Q5U5X0 104 aa13.12□□□□□ -0.31
IKBKB-228ENST00000523517 A0A0J9YXV3 536 aa13.11□□□□□ -0.31
IKBKB-228ENST00000523517 INSL3P51460 131 aa13.11□□□□□ -0.31
IKBKB-228ENST00000523517 SLURP1P55000 103 aa13.11□□□□□ -0.31
IKBKB-228ENST00000523517 BEX4Q9NWD9 120 aaPredicted RBP13.11□□□□□ -0.31
IKBKB-228ENST00000523517 IGHV3-73A0A0B4J1V6 119 aa13.1□□□□□ -0.31
IKBKB-228ENST00000523517 GTSF1LQ9H1H1 148 aa13.1□□□□□ -0.31
IKBKB-228ENST00000523517 CFAP46Q8IYW2 2715 aa13.1□□□□□ -0.31
IKBKB-228ENST00000523517 CSPG4Q6UVK1 2322 aa13.1□□□□□ -0.31
IKBKB-228ENST00000523517 CELSR2Q9HCU4 2923 aa13.1□□□□□ -0.31
IKBKB-228ENST00000523517 C18orf65Q6ZTR6 163 aa13.1□□□□□ -0.31
IKBKB-228ENST00000523517 C10orf126Q8N4M7 172 aa13.1□□□□□ -0.31
IKBKB-228ENST00000523517 IGHV3-64A0A075B6Q5 118 aa13.09□□□□□ -0.31
IKBKB-228ENST00000523517 A8MTW9 85 aa13.09□□□□□ -0.31
IKBKB-228ENST00000523517 H3BMM0 161 aa13.09□□□□□ -0.31
IKBKB-228ENST00000523517 AZU1P20160 251 aa13.09□□□□□ -0.31
IKBKB-228ENST00000523517 PROK1P58294 105 aa13.09□□□□□ -0.31
IKBKB-228ENST00000523517 DEFB136Q30KP8 78 aa13.09□□□□□ -0.31
IKBKB-228ENST00000523517 SPATA25Q9BR10 227 aa13.09□□□□□ -0.31
IKBKB-228ENST00000523517 PRO1854Q9UHT4 67 aa13.09□□□□□ -0.31
IKBKB-228ENST00000523517 C1QTNF4Q9BXJ3 329 aa13.09□□□□□ -0.31
IKBKB-228ENST00000523517 PYGO1Q9Y3Y4 419 aa13.09□□□□□ -0.31
IKBKB-228ENST00000523517 RBMY1BA6NDE4 496 aaKnown RBP13.08□□□□□ -0.32
IKBKB-228ENST00000523517 RBMY1EA6NEQ0 496 aaKnown RBP13.08□□□□□ -0.32
IKBKB-228ENST00000523517 RBMY1DP0C7P1 496 aaKnown RBP13.08□□□□□ -0.32
IKBKB-228ENST00000523517 ATP6V0E2Q8NHE4 81 aa13.08□□□□□ -0.32
IKBKB-228ENST00000523517 Q5PR19 223 aa13.08□□□□□ -0.32
IKBKB-228ENST00000523517 MAP1AP78559 2803 aaPredicted RBP13.07□□□□□ -0.32
IKBKB-228ENST00000523517 IGHV4-31P0DP07 118 aa13.07□□□□□ -0.32
IKBKB-228ENST00000523517 DUX3Q96PT4 197 aa13.07□□□□□ -0.32
IKBKB-228ENST00000523517 TRBV20-1A0A075B6N2 111 aa13.07□□□□□ -0.32
IKBKB-228ENST00000523517 A4D1N5 150 aa13.07□□□□□ -0.32
IKBKB-228ENST00000523517 M0R2P5 195 aa13.07□□□□□ -0.32
IKBKB-228ENST00000523517 TCL1BO95988 128 aa13.07□□□□□ -0.32
IKBKB-228ENST00000523517 PRM2P04554 102 aa13.07□□□□□ -0.32
IKBKB-228ENST00000523517 CD28P10747 220 aa13.07□□□□□ -0.32
IKBKB-228ENST00000523517 FOXI1Q12951 378 aa13.07□□□□□ -0.32
IKBKB-228ENST00000523517 FAM104AQ969W3 186 aa13.07□□□□□ -0.32
IKBKB-228ENST00000523517 TNFRSF18Q9Y5U5 241 aa13.07□□□□□ -0.32
IKBKB-228ENST00000523517 A8MWV9 139 aa13.06□□□□□ -0.32
IKBKB-228ENST00000523517 ZNF418Q8TF45 676 aaPredicted RBP13.06□□□□□ -0.32
IKBKB-228ENST00000523517 TRAV2A0A0B4J234 112 aa13.05□□□□□ -0.32
IKBKB-228ENST00000523517 SCGB1A1P11684 91 aa13.05□□□□□ -0.32
IKBKB-228ENST00000523517 SMAGPQ0VAQ4 97 aa13.05□□□□□ -0.32
IKBKB-228ENST00000523517 USP9XQ93008 2570 aaPredicted RBP13.05□□□□□ -0.32
IKBKB-228ENST00000523517 CRYBA4P53673 196 aa13.05□□□□□ -0.32
IKBKB-228ENST00000523517 TMEM61Q8N0U2 210 aa13.05□□□□□ -0.32
IKBKB-228ENST00000523517 EIF4EBP3O60516 100 aaPredicted RBP13.04□□□□□ -0.32
IKBKB-228ENST00000523517 MRPS36P82909 103 aaKnown RBP13.04□□□□□ -0.32
IKBKB-228ENST00000523517 ZNF415Q09FC8 603 aa13.04□□□□□ -0.32
IKBKB-228ENST00000523517 PIK3CD-AS1Q5SR53 167 aa13.04□□□□□ -0.32
IKBKB-228ENST00000523517 CEMP1Q6PRD7 247 aaPredicted RBP13.04□□□□□ -0.32
IKBKB-228ENST00000523517 Q6ZSN1 163 aa13.04□□□□□ -0.32
IKBKB-228ENST00000523517 MUSTN1Q8IVN3 82 aa13.04□□□□□ -0.32
IKBKB-228ENST00000523517 SPXQ9BT56 116 aa13.04□□□□□ -0.32
IKBKB-228ENST00000523517 SCGB1C2P0DMR2 95 aa13.03□□□□□ -0.32
IKBKB-228ENST00000523517 Q8N2B8 174 aa13.03□□□□□ -0.32
IKBKB-228ENST00000523517 PEMTQ9UBM1 199 aa13.03□□□□□ -0.32
IKBKB-228ENST00000523517 Q9UF83 564 aa13.03□□□□□ -0.32
IKBKB-228ENST00000523517 IGHV3-30-3P0DP02 117 aa13.03□□□□□ -0.32
IKBKB-228ENST00000523517 TMEM263Q8WUH6 116 aaKnown RBP13.03□□□□□ -0.32
IKBKB-228ENST00000523517 PTH2Q96A98 100 aa13.03□□□□□ -0.32
IKBKB-228ENST00000523517 FLNCQ14315 2725 aa13.03□□□□□ -0.32
IKBKB-228ENST00000523517 A0A0J9YXY3 114 aa13.02□□□□□ -0.32
IKBKB-228ENST00000523517 TIMM21Q9BVV7 248 aa13.02□□□□□ -0.32
IKBKB-228ENST00000523517 A0A0B4J2C4 111 aa13.02□□□□□ -0.33
IKBKB-228ENST00000523517 IGHV3-33P01772 117 aa13.02□□□□□ -0.33
IKBKB-228ENST00000523517 SBSPONQ8IVN8 264 aa13.02□□□□□ -0.33
IKBKB-228ENST00000523517 RAX2Q96IS3 184 aa13.02□□□□□ -0.33
IKBKB-228ENST00000523517 MAP6D1Q9H9H5 199 aa13.01□□□□□ -0.33
IKBKB-228ENST00000523517 CHCHD7Q9BUK0 85 aa13.01□□□□□ -0.33
IKBKB-228ENST00000523517 DOPEY2Q9Y3R5 2298 aa13.01□□□□□ -0.33
IKBKB-228ENST00000523517 PIEZO1Q92508 2521 aa13.01□□□□□ -0.33
IKBKB-228ENST00000523517 CRYBG3Q68DQ2 2970 aa13.01□□□□□ -0.33
IKBKB-228ENST00000523517 CSMD2Q7Z408 3487 aa13.01□□□□□ -0.33
IKBKB-228ENST00000523517 RNASE13Q5GAN3 156 aaKnown RBP13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 116.1 ms